Equivalence class NR_4.0_83671.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5GIP|1|G+ 5GIP|1|H+ 5GIP|1|I+ 5GIP|1|J (rep) | C/D RNA, substrate | Saccharolobus solfataricus | Crystal structure of box C/D RNP with 13 nt guide regions and 11 nt substrates | X-ray diffraction | 3.13 | 2016-09-14 | |||
| 2 | 5GIP|1|Q+ 5GIP|1|R+ 5GIP|1|S+ 5GIP|1|T | C/D RNA, substrate | Saccharolobus solfataricus | Crystal structure of box C/D RNP with 13 nt guide regions and 11 nt substrates | X-ray diffraction | 3.13 | 2016-09-14 | |||
| 3 | 5GIN|1|G+ 5GIN|1|H+ 5GIN|1|I+ 5GIN|1|J | C/D RNA, substrate | Saccharolobus solfataricus | Crystal structure of box C/D RNP with 12 nt guide regions and 9 nt substrates | X-ray diffraction | 3.31 | 2016-09-14 | |||
| 4 | 5GIO|1|G+ 5GIO|1|H+ 5GIO|1|I+ 5GIO|1|J | C/D RNA, substrate | Saccharolobus solfataricus | Crystal structure of box C/D RNP with 12 nt guide regions and 13 nt substrates | X-ray diffraction | 3.6 | 2016-09-14 | |||
| 5 | 5GIN|1|N+ 5GIN|1|O | C/D RNA, substrate | Saccharolobus solfataricus | Crystal structure of box C/D RNP with 12 nt guide regions and 9 nt substrates | X-ray diffraction | 3.31 | 2016-09-14 | |||
| 6 | 5GIO|1|N+ 5GIO|1|O | C/D RNA, substrate | Saccharolobus solfataricus | Crystal structure of box C/D RNP with 12 nt guide regions and 13 nt substrates | X-ray diffraction | 3.6 | 2016-09-14 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5GIP|1|Q+5GIP|1|R+5GIP|1|S+5GIP|1|T | Crystal structure of box C/D RNP with 13 nt guide regions and 11 nt substrates | X-RAY DIFFRACTION | 3.13 | 31 |
| 2 | 5GIO|1|G+5GIO|1|H+5GIO|1|I+5GIO|1|J | Crystal structure of box C/D RNP with 12 nt guide regions and 13 nt substrates | X-RAY DIFFRACTION | 3.6 | 35 |
| 3 | 5GIN|1|G+5GIN|1|H+5GIN|1|I+5GIN|1|J | Crystal structure of box C/D RNP with 12 nt guide regions and 9 nt substrates | X-RAY DIFFRACTION | 3.31 | 35 |
| 4 | 5GIO|1|N+5GIO|1|O | Crystal structure of box C/D RNP with 12 nt guide regions and 13 nt substrates | X-RAY DIFFRACTION | 3.6 | 31 |
| 5 | 5GIN|1|N+5GIN|1|O | Crystal structure of box C/D RNP with 12 nt guide regions and 9 nt substrates | X-RAY DIFFRACTION | 3.31 | 31 |
| 6 | 5GIP|1|G+5GIP|1|H+5GIP|1|I+5GIP|1|J | Crystal structure of box C/D RNP with 13 nt guide regions and 11 nt substrates | X-RAY DIFFRACTION | 3.13 | 31 |
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