#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15TBW|1|1+ 5TBW|1|4 (rep)Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-ray diffraction32017-07-26
25TBW|1|AR+ 5TBW|1|ATLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-ray diffraction32017-07-26
34V88|1|A5+ 4V88|1|A8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002The structure of the eukaryotic ribosome at 3.0 A resolution.X-ray diffraction32014-07-09
44V88|1|A1+ 4V88|1|A4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002The structure of the eukaryotic ribosome at 3.0 A resolution.X-ray diffraction32014-07-09
57OSA|1|25S+ 7OSA|1|58SLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-ray diffraction32021-12-08
65I4L|1|5+ 5I4L|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-ray diffraction3.12016-06-22
75I4L|1|1+ 5I4L|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-ray diffraction3.12016-06-22
85MEI|1|AR+ 5MEI|1|ATLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Agelastatin A bound to the 80S ribosomeX-ray diffraction3.52017-06-28
95MEI|1|1+ 5MEI|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Agelastatin A bound to the 80S ribosomeX-ray diffraction3.52017-06-28
106HHQ|1|AR+ 6HHQ|1|ATLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of compound C45 bound to the yeast 80S ribosomeX-ray diffraction3.12019-02-20
116HHQ|1|1+ 6HHQ|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of compound C45 bound to the yeast 80S ribosomeX-ray diffraction3.12019-02-20
125OBM|1|5+ 5OBM|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-ray diffraction3.42017-12-13
135OBM|1|1+ 5OBM|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-ray diffraction3.42017-12-13
145LYB|1|5+ 5LYB|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNA, aminoacyl-tRNA fragment ACCPmnSaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-ray diffraction3.252016-11-23
155NDV|1|1+ 5NDV|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-ray diffraction3.32017-12-13
165ON6|1|1+ 5ON6|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of haemanthamine bound to the 80S ribosomeX-ray diffraction3.12018-02-28
175LYB|1|1+ 5LYB|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNA, aminoacyl-tRNA fragment ACCPmnSaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-ray diffraction3.252016-11-23
185ON6|1|AR+ 5ON6|1|ATLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of haemanthamine bound to the 80S ribosomeX-ray diffraction3.12018-02-28
197OSM|1|25S+ 7OSM|1|58SLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-ray diffraction32021-12-08
205NDV|1|5+ 5NDV|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-ray diffraction3.32017-12-13
215NDW|1|1+ 5NDW|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosomeX-ray diffraction3.72017-12-13
225NDW|1|5+ 5NDW|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosomeX-ray diffraction3.72017-12-13
235NDG|1|5+ 5NDG|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of geneticin (G418) bound to the yeast 80S ribosomeX-ray diffraction3.72017-12-13
245NDG|1|1+ 5NDG|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of geneticin (G418) bound to the yeast 80S ribosomeX-ray diffraction3.72017-12-13
255TGM|1|1+ 5TGM|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNA, Peptidyl-tRNA analog ACCA-Leu-PheSaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.52017-01-18
265TGM|1|5+ 5TGM|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNA, Peptidyl-tRNA analog ACCA-Leu-PheSaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.52017-01-18
274V7R|1|B1+ 4V7R|1|B3Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast 80S ribosome.X-ray diffraction42014-07-09
284V7R|1|D1+ 4V7R|1|D3Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast 80S ribosome.X-ray diffraction42014-07-09
295DAT|1|5+ 5DAT|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Complex of yeast 80S ribosome with hypusine-containing eIF5AX-ray diffraction3.152016-08-31
305DGV|1|5+ 5DGV|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(*CP*CP*(8AN)*(Pro)*(Pro))-3')Saccharomyces cerevisiaeEukaryaRF02543 + RF00002Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.12016-12-14
315DAT|1|1+ 5DAT|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Complex of yeast 80S ribosome with hypusine-containing eIF5AX-ray diffraction3.152016-08-31
325DGV|1|1+ 5DGV|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(*CP*CP*(8AN)*(Pro)*(Pro))-3')Saccharomyces cerevisiaeEukaryaRF02543 + RF00002Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.12016-12-14
335DGE|1|5+ 5DGE|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(*CP*CP*(NA))-3')Saccharomyces cerevisiaeEukaryaRF02543 + RF00002Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-ray diffraction3.452017-01-25
345TGA|1|5+ 5TGA|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.32016-11-23
355DGF|1|5+ 5DGF|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.32016-12-14
365TGA|1|1+ 5TGA|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-ray diffraction3.32016-11-23
375DGF|1|1+ 5DGF|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-ray diffraction3.32016-12-14
385DGE|1|1+ 5DGE|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(*CP*CP*(NA))-3')Saccharomyces cerevisiaeEukaryaRF02543 + RF00002Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-ray diffraction3.452017-01-25
395DC3|1|5+ 5DC3|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Complex of yeast 80S ribosome with non-modified eIF5AX-ray diffraction3.252016-06-01
405DC3|1|1+ 5DC3|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Complex of yeast 80S ribosome with non-modified eIF5AX-ray diffraction3.252016-06-01
417ZW0|1|LA+ 7ZW0|1|LDLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA (RDN25-1), 5.8S ribosomal RNA (RDN58-1)Saccharomyces cerevisiae W303EukaryaRF02543 + RF00002FAP-80S Complex - Rotated stateElectron microscopy2.42022-10-05
427TOP|1|A25S+ 7TOP|1|A58SLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20Electron microscopy2.42022-05-25
436T4Q|1|C1+ 6T4Q|1|C3Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.Electron microscopy2.62019-12-25
447TOO|1|A25S+ 7TOO|1|A58SLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20Electron microscopy2.72022-05-25
457MPJ|1|A1+ 7MPJ|1|A4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Stm1 bound vacant 80S structure isolated from nop1-D243AElectron microscopy2.72022-05-11
466WOO|1|5+ 6WOO|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDPElectron microscopy2.92020-09-23
476TB3|1|BQ+ 6TB3|1|BSLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complexElectron microscopy2.82020-04-22
486SNT|1|1+ 6SNT|1|3Large subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288C 25S ribosomal RNA (RDN25-1), rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast 80S ribosome stalled on SDD1 mRNA.Electron microscopy2.82020-03-04
497AZY|1|E+ 7AZY|1|GLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Context-specific inhibition of eukaryotic translation by macrolide antibioticsElectron microscopy2.8772021-05-19
504U4R|1|1+ 4U4R|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-ray diffraction2.82014-10-22
514U4R|1|5+ 4U4R|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-ray diffraction2.82014-10-22
527UG6|1|1+ 7UG6|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922Electron microscopy2.92022-12-21
534U3U|1|5+ 4U3U|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-ray diffraction2.92014-10-22
544U3U|1|1+ 4U3U|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-ray diffraction2.92014-10-22
557N8B|1|A1+ 7N8B|1|A4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S, 5.8SSaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cycloheximide bound vacant 80S structure isolated from cbf5-D95AElectron microscopy3.052022-05-11
567MPI|1|A1+ 7MPI|1|A4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8 S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Stm1 bound vacant 80S structure isolated from cbf5-D95AElectron microscopy3.052022-05-11
575T62|1|A+ 5T62|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S Ribosomal RNA, 5.8S Ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 ComplexElectron microscopy3.12017-02-08
584U3M|1|1+ 4U3M|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25s rRNA, 5.8s rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
596YLG|1|1+ 6YLG|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)Electron microscopy32020-07-29
604U4Q|1|5+ 4U4Q|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
614U3M|1|5+ 4U3M|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25s rRNA, 5.8s rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
624U4U|1|1+ 4U4U|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Lycorine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
634U4Q|1|1+ 4U4Q|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
644U4U|1|5+ 4U4U|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Lycorine bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
654U52|1|5+ 4U52|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
664U52|1|1+ 4U52|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-ray diffraction32014-10-22
677RR5|1|C1+ 7RR5|1|C3Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structure of ribosomal complex bound with Rbg1/Tma46Electron microscopy3.232021-11-10
687U0H|1|1+ 7U0H|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae BY4741EukaryaRF02543 + RF00002State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall modelElectron microscopy2.762022-12-14
696Q8Y|1|BQ+ 6Q8Y|1|BSLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complexElectron microscopy3.12019-03-13
707OHQ|1|1+ 7OHQ|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particle population C from S. cerevisiaeElectron microscopy3.12021-11-03
716YLH|1|1+ 6YLH|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Rix1-Rea1 pre-60S particle - full composite structureElectron microscopy3.12020-07-29
724U6F|1|1+ 4U6F|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
736T7T|1|C1+ 6T7T|1|C3Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structure of yeast 80S ribosome stalled on poly(A) tract.Electron microscopy3.12019-12-25
744U6F|1|5+ 4U6F|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
756QIK|1|A+ 6QIK|1|yLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesElectron microscopy3.12019-06-26
767B7D|1|LA+ 7B7D|1|LCLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAsElectron microscopy3.32021-03-10
776XIR|1|1+ 6XIR|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA35S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative StressElectron microscopy3.22020-08-26
785M1J|1|14+ 5M1J|1|44Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Nonstop ribosomal complex bound with Dom34 and Hbs1Electron microscopy3.32017-01-18
794U4N|1|5+ 4U4N|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Edeine bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
806TNU|1|BQ+ 6TNU|1|BSLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.Electron microscopy3.12020-04-22
814U4Z|1|5+ 4U4Z|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
824U4N|1|1+ 4U4N|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Edeine bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
834U4Z|1|1+ 4U4Z|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-ray diffraction3.12014-10-22
846RZZ|1|A+ 6RZZ|1|yLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesElectron microscopy3.22019-06-26
856T7I|1|C1+ 6T7I|1|C3Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.Electron microscopy3.22019-12-25
867BT6|1|1+ 7BT6|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNARDN25-1 rRNA, RDN5.8-1 rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)Electron microscopy3.122020-10-28
877BTB|1|1+ 7BTB|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNARDN25-1 rRNA, RDN5.8-1 rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)Electron microscopy3.222020-10-28
884U3N|1|5+ 4U3N|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
894U4Y|1|5+ 4U4Y|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
903JCT|1|1+ 3JCT|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNARDN25-1 rRNA, RDN58-1 rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-em structure of eukaryotic pre-60S ribosomal subunitsElectron microscopy3.082016-06-01
914U3N|1|1+ 4U3N|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
924U55|1|5+ 4U55|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
934U4Y|1|1+ 4U4Y|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
946S47|1|AA+ 6S47|1|ACLarge subunit ribosomal RNA + 5.8S ribosomal RNA28S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1Electron microscopy3.282019-07-24
954U51|1|5+ 4U51|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
964U51|1|1+ 4U51|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
974U55|1|1+ 4U55|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
984U50|1|5+ 4U50|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
996R87|1|1+ 6R87|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)Electron microscopy3.42019-06-26
1005H4P|1|1+ 5H4P|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1Electron microscopy3.072017-01-25
1016M62|1|1+ 6M62|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNARDN25-1 rRNA, RDN58-1 rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.Electron microscopy3.22020-08-26
1024U50|1|1+ 4U50|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-ray diffraction3.22014-10-22
1036Z6K|1|C1+ 6Z6K|1|C3Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomesElectron microscopy3.42020-07-29
1046Z6J|1|C1+ 6Z6J|1|C3Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of yeast Lso2 bound to 80S ribosomes under native conditionElectron microscopy3.42020-07-29
1056R86|1|1+ 6R86|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast Vms1-60S ribosomal subunit complex (post-state)Electron microscopy3.42019-07-31
1066RI5|1|A+ 6RI5|1|yLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S RNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesElectron microscopy3.32019-06-26
1077OF1|1|1+ 7OF1|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particle population A from S. cerevisiaeElectron microscopy3.12021-11-03
1085JUP|1|B+ 5JUP|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)Electron microscopy3.52016-10-05
1096HD7|1|1+ 6HD7|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of the ribosome-NatA complexElectron microscopy3.42018-12-19
1106QT0|1|A+ 6QT0|1|yLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesElectron microscopy3.42019-06-26
1114U53|1|1+ 4U53|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-ray diffraction3.32014-10-22
1126N8M|1|A+ 6N8M|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5.8S RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunitElectron microscopy3.52019-03-13
1136N8O|1|A+ 6N8O|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunitElectron microscopy3.52019-03-13
1147NAC|1|1+ 7NAC|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae BY4741EukaryaRF02543 + RF00002State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite modelElectron microscopy3.042022-11-09
1154U53|1|5+ 4U53|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-ray diffraction3.32014-10-22
1167OH3|1|1+ 7OH3|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particle population B from S. cerevisiaeElectron microscopy3.42021-11-03
1176SV4|1|YQ+ 6SV4|1|YSLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002The cryo-EM structure of SDD1-stalled collided trisome.Electron microscopy3.32020-03-04
1186SV4|1|BQ+ 6SV4|1|BSLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002The cryo-EM structure of SDD1-stalled collided trisome.Electron microscopy3.32020-03-04
1196SV4|1|ZQ+ 6SV4|1|ZSLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002The cryo-EM structure of SDD1-stalled collided trisome.Electron microscopy3.32020-03-04
1206R84|1|1+ 6R84|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)Electron microscopy3.62019-06-26
1217R7A|1|1+ 7R7A|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae BY4741EukaryaRF02543 + RF00002State E1 nucleolar 60S ribosome biogenesis intermediate - Composite modelElectron microscopy3.042022-11-09
1227Z34|1|1+ 7Z34|1|3Large subunit ribosomal RNA + 5.8S ribosomal RNA35S pre-ribosomal RNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Structure of pre-60S particle bound to DRG1(AFG2)Electron microscopy3.82022-09-21
1236N8L|1|1+ 6N8L|1|3Large subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of early cytoplasmic-late (ECL) pre-60S ribosomal subunitElectron microscopy3.62019-03-13
1246N8K|1|1+ 6N8K|1|3Large subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunitElectron microscopy3.62019-03-13
1255APO|1|5+ 5APO|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1Electron microscopy3.412015-12-16
1266QTZ|1|A+ 6QTZ|1|yLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesElectron microscopy3.52019-06-26
1276N8J|1|1+ 6N8J|1|3Large subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunitElectron microscopy3.52019-03-13
1286OIG|1|5+ 6OIG|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Subunit joining exposes nascent pre-40S rRNA for processing and quality controlElectron microscopy3.82020-09-30
1294U56|1|1+ 4U56|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-ray diffraction3.452014-10-22
1304U56|1|5+ 4U56|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-ray diffraction3.452014-10-22
1316N8N|1|A+ 6N8N|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunitElectron microscopy3.82019-03-13
1327NRC|1|LA+ 7NRC|1|LCLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA (3184-MER), 5.8S rRNA (158-MER)Saccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5AElectron microscopy3.92021-05-05
1335MC6|1|BQ+ 5MC6|1|BSLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiaeElectron microscopy3.82017-01-18
1346GQB|1|1+ 6GQB|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)Electron microscopy3.92018-07-11
1355JUU|1|B+ 5JUU|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)Electron microscopy42016-10-05
1366T83|1|1b+ 6T83|1|3bLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structure of yeast disome (di-ribosome) stalled on poly(A) tract.Electron microscopy42019-12-25
1375JUT|1|B+ 5JUT|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)Electron microscopy42016-10-05
1385JUO|1|B+ 5JUO|1|CLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)Electron microscopy42016-10-05
1396T83|1|Aa+ 6T83|1|CaLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structure of yeast disome (di-ribosome) stalled on poly(A) tract.Electron microscopy42019-12-25
1406S05|1|A+ 6S05|1|yLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesElectron microscopy3.92019-06-26
1416GQV|1|1+ 6GQV|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)Electron microscopy42018-07-11
1426FT6|1|1+ 6FT6|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 7S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactorsElectron microscopy3.92018-03-28
1436ELZ|1|1+ 6ELZ|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmesElectron microscopy3.32017-12-27
1445APN|1|5+ 5APN|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1Electron microscopy3.912015-12-16
1456YLY|1|1+ 6YLY|1|3Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002pre-60S State NE2 (TAP-Flag-Nop53)Electron microscopy3.82020-07-29
1464U4O|1|5+ 4U4O|1|8Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Geneticin bound to the yeast 80S ribosomeX-ray diffraction3.62014-10-22
1474U4O|1|1+ 4U4O|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Crystal structure of Geneticin bound to the yeast 80S ribosomeX-ray diffraction3.62014-10-22
1486YLX|1|1+ 6YLX|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002pre-60S State NE1 (TAP-Flag-Nop53)Electron microscopy3.92020-07-29
1495GAK|1|1+ 5GAK|1|4Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5AElectron microscopy3.882016-02-24
1507OHX|1|1+ 7OHX|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population AElectron microscopy3.32021-11-03
1517OHV|1|1+ 7OHV|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population CElectron microscopy3.92021-11-03
1526EM1|1|1+ 6EM1|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S ribosomal RNA, 5.8S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomesElectron microscopy3.62017-12-27
1536EM3|1|1Large subunit ribosomal RNA25S ribosomal RNASaccharomyces cerevisiaeEukaryaRF02543State A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomesElectron microscopy3.22017-12-27
1547OHU|1|1+ 7OHU|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population BElectron microscopy3.72021-11-03
1557OHY|1|1+ 7OHY|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population BElectron microscopy3.92021-11-03
1567OHW|1|1+ 7OHW|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population BElectron microscopy3.52021-11-03
1577OHP|1|1+ 7OHP|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiae S288CEukaryaRF02543 + RF00002Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population AElectron microscopy3.92021-11-03
1586C0F|1|1+ 6C0F|1|2Large subunit ribosomal RNA + 5.8S ribosomal RNASaccharomyces cerevisiae S288c 35S pre-ribosomal RNA miscRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Yeast nucleolar pre-60S ribosomal subunit (state 2)Electron microscopy3.72018-03-14
1595Z3G|1|A+ 5Z3G|1|BLarge subunit ribosomal RNA + 5.8S ribosomal RNA25S rRNA, 5.8S rRNASaccharomyces cerevisiaeEukaryaRF02543 + RF00002Cryo-EM structure of a nucleolar pre-60S ribosome (Rpf1-TAP)Electron microscopy3.652018-04-11

Release history

Release3.2623.2633.2643.2653.2663.2673.268
Date2022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-01

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16OIG|1|5+6OIG|1|8Subunit joining exposes nascent pre-40S rRNA for processing and quality controlELECTRON MICROSCOPY3.83243
26XIR|1|1+6XIR|1|4Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative StressELECTRON MICROSCOPY3.23113
35JUT|1|B+5JUT|1|CSaccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)ELECTRON MICROSCOPY43309
45JUU|1|B+5JUU|1|CSaccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)ELECTRON MICROSCOPY43307
55JUP|1|B+5JUP|1|CSaccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)ELECTRON MICROSCOPY3.53309
65JUO|1|B+5JUO|1|CSaccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)ELECTRON MICROSCOPY43309
76WOO|1|5+6WOO|1|8CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDPELECTRON MICROSCOPY2.93271
85APN|1|5+5APN|1|8Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1ELECTRON MICROSCOPY3.913092
95APO|1|5+5APO|1|8Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1ELECTRON MICROSCOPY3.413092
106R84|1|1+6R84|1|4Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)ELECTRON MICROSCOPY3.63316
116R87|1|1+6R87|1|4Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)ELECTRON MICROSCOPY3.43316
126QT0|1|A+6QT0|1|yCryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesELECTRON MICROSCOPY3.43164
136R86|1|1+6R86|1|4Yeast Vms1-60S ribosomal subunit complex (post-state)ELECTRON MICROSCOPY3.43260
145NDV|1|5+5NDV|1|8Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.33087
154U4O|1|5+4U4O|1|8Crystal structure of Geneticin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.63150
164U56|1|5+4U56|1|8Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.453150
175TGA|1|5+5TGA|1|8Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.33152
184U4Z|1|5+4U4Z|1|8Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13150
194U55|1|5+4U55|1|8Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23150
205I4L|1|5+5I4L|1|8Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13150
214U4N|1|5+4U4N|1|8Crystal structure of Edeine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13150
225LYB|1|5+5LYB|1|8Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-RAY DIFFRACTION3.253150
234V88|1|A5+4V88|1|A8The structure of the eukaryotic ribosome at 3.0 A resolution.X-RAY DIFFRACTION33150
244U4R|1|5+4U4R|1|8Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.83150
254U3U|1|5+4U3U|1|8Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.93150
264U3N|1|5+4U3N|1|8Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23151
274U4Y|1|5+4U4Y|1|8Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23150
284U3M|1|5+4U3M|1|8Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION33150
294U6F|1|5+4U6F|1|8Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13150
304U52|1|5+4U52|1|8Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-RAY DIFFRACTION33150
314U4Q|1|5+4U4Q|1|8Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-RAY DIFFRACTION33150
324U4U|1|5+4U4U|1|8Crystal structure of Lycorine bound to the yeast 80S ribosomeX-RAY DIFFRACTION33150
334U51|1|5+4U51|1|8Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23150
344U53|1|5+4U53|1|8Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.33150
354U50|1|5+4U50|1|8Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23150
365TGM|1|5+5TGM|1|8Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.53150
375DGV|1|5+5DGV|1|8Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.13149
385DGE|1|5+5DGE|1|8Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-RAY DIFFRACTION3.453150
395DC3|1|5+5DC3|1|8Complex of yeast 80S ribosome with non-modified eIF5AX-RAY DIFFRACTION3.253169
405DAT|1|5+5DAT|1|8Complex of yeast 80S ribosome with hypusine-containing eIF5AX-RAY DIFFRACTION3.153169
415DGF|1|5+5DGF|1|8Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.33169
425OBM|1|5+5OBM|1|8Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.43134
435TBW|1|AR+5TBW|1|ATCrystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-RAY DIFFRACTION33149
446HHQ|1|AR+6HHQ|1|ATCrystal structure of compound C45 bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13147
455ON6|1|AR+5ON6|1|ATCrystal structure of haemanthamine bound to the 80S ribosomeX-RAY DIFFRACTION3.13149
465MEI|1|AR+5MEI|1|ATCrystal structure of Agelastatin A bound to the 80S ribosomeX-RAY DIFFRACTION3.53149
476T83|1|Aa+6T83|1|CaStructure of yeast disome (di-ribosome) stalled on poly(A) tract.ELECTRON MICROSCOPY43127
486SV4|1|BQ+6SV4|1|BSThe cryo-EM structure of SDD1-stalled collided trisome.ELECTRON MICROSCOPY3.33127
496SV4|1|YQ+6SV4|1|YSThe cryo-EM structure of SDD1-stalled collided trisome.ELECTRON MICROSCOPY3.33127
506SV4|1|ZQ+6SV4|1|ZSThe cryo-EM structure of SDD1-stalled collided trisome.ELECTRON MICROSCOPY3.33127
515NDG|1|5+5NDG|1|8Crystal structure of geneticin (G418) bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.73127
525NDW|1|5+5NDW|1|8Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.73080
535M1J|1|14+5M1J|1|44Nonstop ribosomal complex bound with Dom34 and Hbs1ELECTRON MICROSCOPY3.33295
545NDG|1|1+5NDG|1|4Crystal structure of geneticin (G418) bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.73078
555NDW|1|1+5NDW|1|4Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.73090
567B7D|1|LA+7B7D|1|LCYeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAsELECTRON MICROSCOPY3.33223
575NDV|1|1+5NDV|1|4Crystal structure of Paromomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.33078
585OBM|1|1+5OBM|1|4Crystal structure of Gentamicin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.43100
594U4O|1|1+4U4O|1|4Crystal structure of Geneticin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.63149
605TGM|1|1+5TGM|1|4Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.53149
615TGA|1|1+5TGA|1|4Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-ProX-RAY DIFFRACTION3.33151
625LYB|1|1+5LYB|1|4Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmnX-RAY DIFFRACTION3.253149
634V88|1|A1+4V88|1|A4The structure of the eukaryotic ribosome at 3.0 A resolution.X-RAY DIFFRACTION33149
644U3U|1|1+4U3U|1|4Crystal structure of Cycloheximide bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.93149
654U4R|1|1+4U4R|1|4Crystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.83149
664U3N|1|1+4U3N|1|4Crystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23150
674U55|1|1+4U55|1|4Crystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23149
684U4Z|1|1+4U4Z|1|4Crystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13149
694U4N|1|1+4U4N|1|4Crystal structure of Edeine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13149
705I4L|1|1+5I4L|1|4Crystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13149
714U51|1|1+4U51|1|4Crystal structure of Narciclasine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23149
724U4U|1|1+4U4U|1|4Crystal structure of Lycorine bound to the yeast 80S ribosomeX-RAY DIFFRACTION33149
734U4Q|1|1+4U4Q|1|4Crystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-RAY DIFFRACTION33149
744U6F|1|1+4U6F|1|4Crystal structure of T-2 toxin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13149
754U52|1|1+4U52|1|4Crystal structure of Nagilactone C bound to the yeast 80S ribosomeX-RAY DIFFRACTION33149
764U50|1|1+4U50|1|4Crystal structure of Verrucarin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23149
774U53|1|1+4U53|1|4Crystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.33149
785MEI|1|1+5MEI|1|4Crystal structure of Agelastatin A bound to the 80S ribosomeX-RAY DIFFRACTION3.53149
795ON6|1|1+5ON6|1|4Crystal structure of haemanthamine bound to the 80S ribosomeX-RAY DIFFRACTION3.13149
806HHQ|1|1+6HHQ|1|4Crystal structure of compound C45 bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.13149
814U56|1|1+4U56|1|4Crystal structure of Blasticidin S bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.453149
824U3M|1|1+4U3M|1|4Crystal structure of Anisomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION33149
834U4Y|1|1+4U4Y|1|4Crystal structure of Pactamycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.23149
845TBW|1|1+5TBW|1|4Crystal structure of chlorolissoclimide bound to the yeast 80S ribosomeX-RAY DIFFRACTION33149
855DC3|1|1+5DC3|1|4Complex of yeast 80S ribosome with non-modified eIF5AX-RAY DIFFRACTION3.253149
865DGE|1|1+5DGE|1|4Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosomeX-RAY DIFFRACTION3.453149
875DGV|1|1+5DGV|1|4Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.13148
885DGF|1|1+5DGF|1|4Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analogX-RAY DIFFRACTION3.33149
895DAT|1|1+5DAT|1|4Complex of yeast 80S ribosome with hypusine-containing eIF5AX-RAY DIFFRACTION3.153149
906S47|1|AA+6S47|1|ACSaccharomyces cerevisiae 80S ribosome bound with ABCF protein New1ELECTRON MICROSCOPY3.283149
916TB3|1|BQ+6TB3|1|BSyeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complexELECTRON MICROSCOPY2.83223
926SNT|1|1+6SNT|1|3Yeast 80S ribosome stalled on SDD1 mRNA.ELECTRON MICROSCOPY2.83184
936T4Q|1|C1+6T4Q|1|C3Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.ELECTRON MICROSCOPY2.63184
946T7T|1|C1+6T7T|1|C3Structure of yeast 80S ribosome stalled on poly(A) tract.ELECTRON MICROSCOPY3.13184
956T7I|1|C1+6T7I|1|C3Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.ELECTRON MICROSCOPY3.23184
966T83|1|1b+6T83|1|3bStructure of yeast disome (di-ribosome) stalled on poly(A) tract.ELECTRON MICROSCOPY43184
975H4P|1|1+5H4P|1|4Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1ELECTRON MICROSCOPY3.073091
987ZW0|1|LA+7ZW0|1|LDFAP-80S Complex - Rotated stateELECTRON MICROSCOPY2.43217
997AZY|1|E+7AZY|1|GContext-specific inhibition of eukaryotic translation by macrolide antibioticsELECTRON MICROSCOPY2.8773161
1006Q8Y|1|BQ+6Q8Y|1|BSCryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complexELECTRON MICROSCOPY3.13161
1015MC6|1|BQ+5MC6|1|BSCryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiaeELECTRON MICROSCOPY3.83165
1027NRC|1|LA+7NRC|1|LCStructure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5AELECTRON MICROSCOPY3.93184
1036TNU|1|BQ+6TNU|1|BSYeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.ELECTRON MICROSCOPY3.13184
1045GAK|1|1+5GAK|1|4Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5AELECTRON MICROSCOPY3.883165
1056HD7|1|1+6HD7|1|4Cryo-EM structure of the ribosome-NatA complexELECTRON MICROSCOPY3.43335
1067MPJ|1|A1+7MPJ|1|A4Stm1 bound vacant 80S structure isolated from nop1-D243AELECTRON MICROSCOPY2.73067
1077MPI|1|A1+7MPI|1|A4Stm1 bound vacant 80S structure isolated from cbf5-D95AELECTRON MICROSCOPY3.053096
1087N8B|1|A1+7N8B|1|A4Cycloheximide bound vacant 80S structure isolated from cbf5-D95AELECTRON MICROSCOPY3.053115
1097TOO|1|A25S+7TOO|1|A58SYeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20ELECTRON MICROSCOPY2.73194
1107TOP|1|A25S+7TOP|1|A58SYeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20ELECTRON MICROSCOPY2.43194
1116Z6J|1|C1+6Z6J|1|C3Cryo-EM structure of yeast Lso2 bound to 80S ribosomes under native conditionELECTRON MICROSCOPY3.43127
1126Z6K|1|C1+6Z6K|1|C3Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomesELECTRON MICROSCOPY3.43127
1137RR5|1|C1+7RR5|1|C3Structure of ribosomal complex bound with Rbg1/Tma46ELECTRON MICROSCOPY3.233221
1146GQV|1|1+6GQV|1|4Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)ELECTRON MICROSCOPY43223
1156GQB|1|1+6GQB|1|4Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)ELECTRON MICROSCOPY3.93223
1167OSA|1|25S+7OSA|1|58SPre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-RAY DIFFRACTION33180
1177OSM|1|25S+7OSM|1|58SIntermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-RAY DIFFRACTION33162
1186RI5|1|A+6RI5|1|yCryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesELECTRON MICROSCOPY3.33147
1196QTZ|1|A+6QTZ|1|yCryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesELECTRON MICROSCOPY3.53146
1206N8O|1|A+6N8O|1|CCryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunitELECTRON MICROSCOPY3.53201
1215T62|1|A+5T62|1|CNmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 ComplexELECTRON MICROSCOPY3.13200
1224V7R|1|D1+4V7R|1|D3Yeast 80S ribosome.X-RAY DIFFRACTION43206
1234V7R|1|B1+4V7R|1|B3Yeast 80S ribosome.X-RAY DIFFRACTION43206
1246S05|1|A+6S05|1|yCryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesELECTRON MICROSCOPY3.93146
1256RZZ|1|A+6RZZ|1|yCryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesELECTRON MICROSCOPY3.23146
1266QIK|1|A+6QIK|1|yCryo-EM structures of Lsg1-TAP pre-60S ribosomal particlesELECTRON MICROSCOPY3.13146
1276N8M|1|A+6N8M|1|CCryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunitELECTRON MICROSCOPY3.53203
1286N8N|1|A+6N8N|1|CCryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunitELECTRON MICROSCOPY3.83203
1296N8L|1|1+6N8L|1|3Cryo-EM structure of early cytoplasmic-late (ECL) pre-60S ribosomal subunitELECTRON MICROSCOPY3.63201
1306N8K|1|1+6N8K|1|3Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunitELECTRON MICROSCOPY3.63201
1317Z34|1|1+7Z34|1|3Structure of pre-60S particle bound to DRG1(AFG2)ELECTRON MICROSCOPY3.83347
1326N8J|1|1+6N8J|1|3Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunitELECTRON MICROSCOPY3.53047
1337OF1|1|1+7OF1|1|2Nog1-TAP associated immature ribosomal particle population A from S. cerevisiaeELECTRON MICROSCOPY3.12787
1346YLH|1|1+6YLH|1|2Rix1-Rea1 pre-60S particle - full composite structureELECTRON MICROSCOPY3.13039
1356YLG|1|1+6YLG|1|2Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)ELECTRON MICROSCOPY33039
1366YLY|1|1+6YLY|1|3pre-60S State NE2 (TAP-Flag-Nop53)ELECTRON MICROSCOPY3.82676
1377UG6|1|1+7UG6|1|2Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922ELECTRON MICROSCOPY2.93058
1387OHQ|1|1+7OHQ|1|2Nog1-TAP associated immature ribosomal particle population C from S. cerevisiaeELECTRON MICROSCOPY3.13053
1397OH3|1|1+7OH3|1|2Nog1-TAP associated immature ribosomal particle population B from S. cerevisiaeELECTRON MICROSCOPY3.43013
1406FT6|1|1+6FT6|1|2Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactorsELECTRON MICROSCOPY3.93058
1413JCT|1|1+3JCT|1|2Cryo-em structure of eukaryotic pre-60S ribosomal subunitsELECTRON MICROSCOPY3.083058
1426M62|1|1+6M62|1|2Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.ELECTRON MICROSCOPY3.22972
1437BTB|1|1+7BTB|1|2Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)ELECTRON MICROSCOPY3.223058
1446YLX|1|1+6YLX|1|2pre-60S State NE1 (TAP-Flag-Nop53)ELECTRON MICROSCOPY3.92534
1457BT6|1|1+7BT6|1|2Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)ELECTRON MICROSCOPY3.122962
1467U0H|1|1+7U0H|1|2State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall modelELECTRON MICROSCOPY2.762722
1477OHV|1|1+7OHV|1|2Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population CELECTRON MICROSCOPY3.92141
1486ELZ|1|1+6ELZ|1|2State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmesELECTRON MICROSCOPY3.32457
1497NAC|1|1+7NAC|1|2State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite modelELECTRON MICROSCOPY3.042657
1507R7A|1|1+7R7A|1|2State E1 nucleolar 60S ribosome biogenesis intermediate - Composite modelELECTRON MICROSCOPY3.042571
1517OHY|1|1+7OHY|1|2Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population BELECTRON MICROSCOPY3.91689
1527OHU|1|1+7OHU|1|2Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population BELECTRON MICROSCOPY3.71692
1537OHP|1|1+7OHP|1|2Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population AELECTRON MICROSCOPY3.91567
1545Z3G|1|A+5Z3G|1|BCryo-EM structure of a nucleolar pre-60S ribosome (Rpf1-TAP)ELECTRON MICROSCOPY3.651501
1556EM1|1|1+6EM1|1|2State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomesELECTRON MICROSCOPY3.61785
1567OHW|1|1+7OHW|1|2Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population BELECTRON MICROSCOPY3.51639
1577OHX|1|1+7OHX|1|2Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population AELECTRON MICROSCOPY3.31561
1586C0F|1|1+6C0F|1|2Yeast nucleolar pre-60S ribosomal subunit (state 2)ELECTRON MICROSCOPY3.71357
1596EM3|1|1State A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomesELECTRON MICROSCOPY3.21250