NR_4.0_90506.63

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	5TBW\|1\|1+ 5TBW\|1\|4 (rep)	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-ray diffraction	3	2017-07-26
2	5TBW\|1\|AR+ 5TBW\|1\|AT	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-ray diffraction	3	2017-07-26
3	4V88\|1\|A5+ 4V88\|1\|A8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-ray diffraction	3	2014-07-09
4	4V88\|1\|A1+ 4V88\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-ray diffraction	3	2014-07-09
5	7OSA\|1\|25S+ 7OSA\|1\|58S	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-ray diffraction	3	2021-12-08
6	5I4L\|1\|5+ 5I4L\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-ray diffraction	3.1	2016-06-22
7	5I4L\|1\|1+ 5I4L\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-ray diffraction	3.1	2016-06-22
8	5MEI\|1\|AR+ 5MEI\|1\|AT	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Agelastatin A bound to the 80S ribosome	X-ray diffraction	3.5	2017-06-28
9	5MEI\|1\|1+ 5MEI\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Agelastatin A bound to the 80S ribosome	X-ray diffraction	3.5	2017-06-28
10	6HHQ\|1\|AR+ 6HHQ\|1\|AT	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-ray diffraction	3.1	2019-02-20
11	6HHQ\|1\|1+ 6HHQ\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-ray diffraction	3.1	2019-02-20
12	5OBM\|1\|5+ 5OBM\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-ray diffraction	3.4	2017-12-13
13	5OBM\|1\|1+ 5OBM\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-ray diffraction	3.4	2017-12-13
14	5LYB\|1\|5+ 5LYB\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA, aminoacyl-tRNA fragment ACCPmn	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-ray diffraction	3.25	2016-11-23
15	5NDV\|1\|1+ 5NDV\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-ray diffraction	3.3	2017-12-13
16	5ON6\|1\|1+ 5ON6\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of haemanthamine bound to the 80S ribosome	X-ray diffraction	3.1	2018-02-28
17	5LYB\|1\|1+ 5LYB\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA, aminoacyl-tRNA fragment ACCPmn	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-ray diffraction	3.25	2016-11-23
18	5ON6\|1\|AR+ 5ON6\|1\|AT	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of haemanthamine bound to the 80S ribosome	X-ray diffraction	3.1	2018-02-28
19	7OSM\|1\|25S+ 7OSM\|1\|58S	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-ray diffraction	3	2021-12-08
20	5NDV\|1\|5+ 5NDV\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-ray diffraction	3.3	2017-12-13
21	5NDW\|1\|1+ 5NDW\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-ray diffraction	3.7	2017-12-13
22	5NDW\|1\|5+ 5NDW\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-ray diffraction	3.7	2017-12-13
23	5NDG\|1\|5+ 5NDG\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-ray diffraction	3.7	2017-12-13
24	5NDG\|1\|1+ 5NDG\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-ray diffraction	3.7	2017-12-13
25	5TGM\|1\|1+ 5TGM\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA, Peptidyl-tRNA analog ACCA-Leu-Phe	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.5	2017-01-18
26	5TGM\|1\|5+ 5TGM\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA, Peptidyl-tRNA analog ACCA-Leu-Phe	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.5	2017-01-18
27	4V7R\|1\|B1+ 4V7R\|1\|B3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S ribosome.	X-ray diffraction	4	2014-07-09
28	4V7R\|1\|D1+ 4V7R\|1\|D3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S ribosome.	X-ray diffraction	4	2014-07-09
29	5DAT\|1\|5+ 5DAT\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-ray diffraction	3.15	2016-08-31
30	5DGV\|1\|5+ 5DGV\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(CPCP(8AN)(Pro)*(Pro))-3')	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.1	2016-12-14
31	5DAT\|1\|1+ 5DAT\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-ray diffraction	3.15	2016-08-31
32	5DGV\|1\|1+ 5DGV\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(CPCP(8AN)(Pro)*(Pro))-3')	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.1	2016-12-14
33	5DGE\|1\|5+ 5DGE\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(CPCP*(NA))-3')	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-ray diffraction	3.45	2017-01-25
34	5TGA\|1\|5+ 5TGA\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.3	2016-11-23
35	5DGF\|1\|5+ 5DGF\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.3	2016-12-14
36	5TGA\|1\|1+ 5TGA\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.3	2016-11-23
37	5DGF\|1\|1+ 5DGF\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.3	2016-12-14
38	5DGE\|1\|1+ 5DGE\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA, DNA (5'-R(CPCP*(NA))-3')	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-ray diffraction	3.45	2017-01-25
39	5DC3\|1\|5+ 5DC3\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with non-modified eIF5A	X-ray diffraction	3.25	2016-06-01
40	5DC3\|1\|1+ 5DC3\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Complex of yeast 80S ribosome with non-modified eIF5A	X-ray diffraction	3.25	2016-06-01
41	8CCS\|1\|AA+ 8CCS\|1\|CC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex	Electron microscopy	1.97	2023-09-20
42	8CDR\|1\|AA+ 8CDR\|1\|CC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	Electron microscopy	2.04	2023-09-20
43	8CEH\|1\|AA+ 8CEH\|1\|CC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Translocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	Electron microscopy	2.05	2023-09-20
44	8EVT\|1\|A1+ 8EVT\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) refined against a composite map	Electron microscopy	2.2	2023-09-06
45	8CGN\|1\|AA+ 8CGN\|1\|CC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Non-rotated 80S S. cerevisiae ribosome with ligands	Electron microscopy	2.28	2023-09-20
46	7ZW0\|1\|LA+ 7ZW0\|1\|LD	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA (RDN25-1), 5.8S ribosomal RNA (RDN58-1)	Saccharomyces cerevisiae W303	Eukarya	RF02543 + RF00002	FAP-80S Complex - Rotated state	Electron microscopy	2.4	2022-10-05
47	8AGX\|1\|f+ 8AGX\|1\|i	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast RQC complex in state with the RING domain of Ltn1 in the IN position	Electron microscopy	2.4	2023-03-08
48	7TOP\|1\|A25S+ 7TOP\|1\|A58S	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20	Electron microscopy	2.4	2022-05-25
49	8EVP\|1\|A1+ 8EVP\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure I	Electron microscopy	2.38	2023-09-06
50	8AAF\|1\|f+ 8AAF\|1\|i	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast RQC complex in state G	Electron microscopy	2.5	2023-03-08
51	8EWC\|1\|A1+ 8EWC\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure II	Electron microscopy	2.45	2023-09-06
52	8CIV\|1\|AA+ 8CIV\|1\|CC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	Electron microscopy	2.47	2023-09-20
53	7ZUX\|1\|5+ 7ZUX\|1\|3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Collided ribosome in a disome unit from S. cerevisiae	Electron microscopy	2.5	2023-02-22
54	8EUB\|1\|A1+ 8EUB\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure I	Electron microscopy	2.52	2023-09-06
55	8HFR\|1\|1e+ 8HFR\|1\|3n	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	NPC-trapped pre-60S particle	Electron microscopy	2.64	2023-04-12
56	8AGZ\|1\|f+ 8AGZ\|1\|i	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position	Electron microscopy	2.6	2023-03-08
57	8AGT\|1\|f+ 8AGT\|1\|i	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast RQC complex in state F	Electron microscopy	2.6	2023-03-08
58	8AGV\|1\|f+ 8AGV\|1\|i	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast RQC complex in state H	Electron microscopy	2.6	2023-03-08
59	8AGW\|1\|f+ 8AGW\|1\|i	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast RQC complex in state D	Electron microscopy	2.6	2023-03-08
60	7UOO\|1\|1+ 7UOO\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae BY4741	Eukarya	RF02543 + RF00002	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state	Electron microscopy	2.34	2023-03-15
61	8CG8\|1\|AA+ 8CG8\|1\|CC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Translocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	Electron microscopy	2.57	2023-09-20
62	7V08\|1\|1+ 7V08\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae BY4741	Eukarya	RF02543 + RF00002	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain	Electron microscopy	2.36	2023-03-15
63	8EVS\|1\|A1+ 8EVS\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure II	Electron microscopy	2.62	2023-09-06
64	8AGU\|1\|f+ 8AGU\|1\|i	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast RQC complex in state E	Electron microscopy	2.7	2023-03-08
65	7UQB\|1\|1+ 7UQB\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae BY4741	Eukarya	RF02543 + RF00002	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1-D52A strain with AlF4	Electron microscopy	2.43	2023-03-15
66	6T4Q\|1\|C1+ 6T4Q\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.	Electron microscopy	2.6	2019-12-25
67	7UQZ\|1\|1+ 7UQZ\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae BY4741	Eukarya	RF02543 + RF00002	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strain	Electron microscopy	2.44	2023-03-15
68	7TOO\|1\|A25S+ 7TOO\|1\|A58S	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	Electron microscopy	2.7	2022-05-25
69	8CF5\|1\|AA+ 8CF5\|1\|CC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	Electron microscopy	2.71	2023-09-20
70	8EVQ\|1\|A1+ 8EVQ\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I	Electron microscopy	2.72	2023-09-06
71	8CDL\|1\|AA+ 8CDL\|1\|CC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complex	Electron microscopy	2.72	2023-09-20
72	7MPJ\|1\|A1+ 7MPJ\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Stm1 bound vacant 80S structure isolated from nop1-D243A	Electron microscopy	2.7	2022-05-11
73	6WOO\|1\|5+ 6WOO\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP	Electron microscopy	2.9	2020-09-23
74	6TB3\|1\|BQ+ 6TB3\|1\|BS	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complex	Electron microscopy	2.8	2020-04-22
75	6SNT\|1\|1+ 6SNT\|1\|3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, Saccharomyces cerevisiae S288C 25S ribosomal RNA (RDN25-1), rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S ribosome stalled on SDD1 mRNA.	Electron microscopy	2.8	2020-03-04
76	8EVR\|1\|A1+ 8EVR\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II	Electron microscopy	2.87	2023-09-06
77	8EWB\|1\|A1+ 8EWB\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure III	Electron microscopy	2.87	2023-09-06
78	7AZY\|1\|E+ 7AZY\|1\|G	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Context-specific inhibition of eukaryotic translation by macrolide antibiotics	Electron microscopy	2.877	2021-05-19
79	4U4R\|1\|1+ 4U4R\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-ray diffraction	2.8	2014-10-22
80	4U4R\|1\|5+ 4U4R\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-ray diffraction	2.8	2014-10-22
81	8BIP\|1\|1+ 8BIP\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex	Electron microscopy	3.1	2023-02-08
82	7UG6\|1\|1+ 7UG6\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922	Electron microscopy	2.9	2022-12-21
83	4U3U\|1\|5+ 4U3U\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-ray diffraction	2.9	2014-10-22
84	4U3U\|1\|1+ 4U3U\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-ray diffraction	2.9	2014-10-22
85	7N8B\|1\|A1+ 7N8B\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S, 5.8S	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cycloheximide bound vacant 80S structure isolated from cbf5-D95A	Electron microscopy	3.05	2022-05-11
86	7MPI\|1\|A1+ 7MPI\|1\|A4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8 S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Stm1 bound vacant 80S structure isolated from cbf5-D95A	Electron microscopy	3.05	2022-05-11
87	7ZS5\|1\|1+ 7ZS5\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA	Electron microscopy	3.2	2023-02-22
88	5T62\|1\|A+ 5T62\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S Ribosomal RNA, 5.8S Ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 Complex	Electron microscopy	3.1	2017-02-08
89	4U3M\|1\|1+ 4U3M\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25s rRNA, 5.8s rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
90	6YLG\|1\|1+ 6YLG\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)	Electron microscopy	3	2020-07-29
91	4U4Q\|1\|5+ 4U4Q\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
92	8CKU\|1\|AA+ 8CKU\|1\|CC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin	Electron microscopy	3.11	2023-09-20
93	4U3M\|1\|5+ 4U3M\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25s rRNA, 5.8s rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
94	4U4U\|1\|1+ 4U4U\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
95	4U4Q\|1\|1+ 4U4Q\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
96	4U4U\|1\|5+ 4U4U\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
97	4U52\|1\|5+ 4U52\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
98	4U52\|1\|1+ 4U52\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-ray diffraction	3	2014-10-22
99	7RR5\|1\|C1+ 7RR5\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of ribosomal complex bound with Rbg1/Tma46	Electron microscopy	3.23	2021-11-10
100	7U0H\|1\|1+ 7U0H\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae BY4741	Eukarya	RF02543 + RF00002	State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model	Electron microscopy	2.76	2022-12-14
101	6Q8Y\|1\|BQ+ 6Q8Y\|1\|BS	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complex	Electron microscopy	3.1	2019-03-13
102	7OHQ\|1\|1+ 7OHQ\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae	Electron microscopy	3.1	2021-11-03
103	6YLH\|1\|1+ 6YLH\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Rix1-Rea1 pre-60S particle - full composite structure	Electron microscopy	3.1	2020-07-29
104	4U6F\|1\|1+ 4U6F\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
105	6T7T\|1\|C1+ 6T7T\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of yeast 80S ribosome stalled on poly(A) tract.	Electron microscopy	3.1	2019-12-25
106	4U6F\|1\|5+ 4U6F\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
107	6QIK\|1\|A+ 6QIK\|1\|y	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.1	2019-06-26
108	7B7D\|1\|LA+ 7B7D\|1\|LC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs	Electron microscopy	3.3	2021-03-10
109	6XIR\|1\|1+ 6XIR\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	35S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative Stress	Electron microscopy	3.2	2020-08-26
110	5M1J\|1\|14+ 5M1J\|1\|44	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Nonstop ribosomal complex bound with Dom34 and Hbs1	Electron microscopy	3.3	2017-01-18
111	4U4N\|1\|5+ 4U4N\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Edeine bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
112	6TNU\|1\|BQ+ 6TNU\|1\|BS	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.	Electron microscopy	3.1	2020-04-22
113	4U4Z\|1\|5+ 4U4Z\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
114	4U4N\|1\|1+ 4U4N\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Edeine bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
115	4U4Z\|1\|1+ 4U4Z\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-ray diffraction	3.1	2014-10-22
116	6RZZ\|1\|A+ 6RZZ\|1\|y	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.2	2019-06-26
117	6T7I\|1\|C1+ 6T7I\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.	Electron microscopy	3.2	2019-12-25
118	7BT6\|1\|1+ 7BT6\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	RDN25-1 rRNA, RDN5.8-1 rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)	Electron microscopy	3.12	2020-10-28
119	7BTB\|1\|1+ 7BTB\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	RDN25-1 rRNA, RDN5.8-1 rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)	Electron microscopy	3.22	2020-10-28
120	4U3N\|1\|5+ 4U3N\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
121	4U4Y\|1\|5+ 4U4Y\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
122	3JCT\|1\|1+ 3JCT\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	RDN25-1 rRNA, RDN58-1 rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-em structure of eukaryotic pre-60S ribosomal subunits	Electron microscopy	3.08	2016-06-01
123	4U3N\|1\|1+ 4U3N\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
124	4U55\|1\|5+ 4U55\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
125	4U4Y\|1\|1+ 4U4Y\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
126	6S47\|1\|AA+ 6S47\|1\|AC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	28S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1	Electron microscopy	3.28	2019-07-24
127	4U51\|1\|5+ 4U51\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
128	4U51\|1\|1+ 4U51\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
129	4U55\|1\|1+ 4U55\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
130	4U50\|1\|5+ 4U50\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
131	6R87\|1\|1+ 6R87\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)	Electron microscopy	3.4	2019-06-26
132	5H4P\|1\|1+ 5H4P\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1	Electron microscopy	3.07	2017-01-25
133	6M62\|1\|1+ 6M62\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	RDN25-1 rRNA, RDN58-1 rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.	Electron microscopy	3.2	2020-08-26
134	4U50\|1\|1+ 4U50\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-ray diffraction	3.2	2014-10-22
135	6Z6K\|1\|C1+ 6Z6K\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomes	Electron microscopy	3.4	2020-07-29
136	6Z6J\|1\|C1+ 6Z6J\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of yeast Lso2 bound to 80S ribosomes under native condition	Electron microscopy	3.4	2020-07-29
137	6R86\|1\|1+ 6R86\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast Vms1-60S ribosomal subunit complex (post-state)	Electron microscopy	3.4	2019-07-31
138	6RI5\|1\|A+ 6RI5\|1\|y	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S RNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.3	2019-06-26
139	7ZPQ\|1\|5+ 7ZPQ\|1\|3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)	Electron microscopy	3.47	2023-02-22
140	7OF1\|1\|1+ 7OF1\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae	Electron microscopy	3.1	2021-11-03
141	5JUP\|1\|B+ 5JUP\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)	Electron microscopy	3.5	2016-10-05
142	6HD7\|1\|1+ 6HD7\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of the ribosome-NatA complex	Electron microscopy	3.4	2018-12-19
143	6QT0\|1\|A+ 6QT0\|1\|y	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.4	2019-06-26
144	4U53\|1\|1+ 4U53\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-ray diffraction	3.3	2014-10-22
145	6N8M\|1\|A+ 6N8M\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S RNA, Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunit	Electron microscopy	3.5	2019-03-13
146	6N8O\|1\|A+ 6N8O\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunit	Electron microscopy	3.5	2019-03-13
147	7NAC\|1\|1+ 7NAC\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae BY4741	Eukarya	RF02543 + RF00002	State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model	Electron microscopy	3.04	2022-11-09
148	4U53\|1\|5+ 4U53\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-ray diffraction	3.3	2014-10-22
149	7OH3\|1\|1+ 7OH3\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Nog1-TAP associated immature ribosomal particle population B from S. cerevisiae	Electron microscopy	3.4	2021-11-03
150	6SV4\|1\|YQ+ 6SV4\|1\|YS	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	The cryo-EM structure of SDD1-stalled collided trisome.	Electron microscopy	3.3	2020-03-04
151	6SV4\|1\|BQ+ 6SV4\|1\|BS	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	The cryo-EM structure of SDD1-stalled collided trisome.	Electron microscopy	3.3	2020-03-04
152	6SV4\|1\|ZQ+ 6SV4\|1\|ZS	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	The cryo-EM structure of SDD1-stalled collided trisome.	Electron microscopy	3.3	2020-03-04
153	6R84\|1\|1+ 6R84\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)	Electron microscopy	3.6	2019-06-26
154	7R7A\|1\|1+ 7R7A\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae BY4741	Eukarya	RF02543 + RF00002	State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model	Electron microscopy	3.04	2022-11-09
155	7Z34\|1\|1+ 7Z34\|1\|3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	35S pre-ribosomal RNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Structure of pre-60S particle bound to DRG1(AFG2)	Electron microscopy	3.8	2022-09-21
156	6N8L\|1\|1+ 6N8L\|1\|3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of early cytoplasmic-late (ECL) pre-60S ribosomal subunit	Electron microscopy	3.6	2019-03-13
157	6N8K\|1\|1+ 6N8K\|1\|3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunit	Electron microscopy	3.6	2019-03-13
158	5APO\|1\|5+ 5APO\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1	Electron microscopy	3.41	2015-12-16
159	8BJQ\|1\|1+ 8BJQ\|1\|C3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex	Electron microscopy	3.8	2023-02-08
160	8BQX\|1\|BQ+ 8BQX\|1\|BS	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S ribosome in complex with Map1 (conformation 2)	Electron microscopy	3.8	2023-03-22
161	6QTZ\|1\|A+ 6QTZ\|1\|y	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.5	2019-06-26
162	6N8J\|1\|1+ 6N8J\|1\|3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunit	Electron microscopy	3.5	2019-03-13
163	6OIG\|1\|5+ 6OIG\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Subunit joining exposes nascent pre-40S rRNA for processing and quality control	Electron microscopy	3.8	2020-09-30
164	4U56\|1\|1+ 4U56\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-ray diffraction	3.45	2014-10-22
165	4U56\|1\|5+ 4U56\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-ray diffraction	3.45	2014-10-22
166	8BQD\|1\|BQ+ 8BQD\|1\|BS	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 80S ribosome in complex with Map1 (conformation 1)	Electron microscopy	3.9	2023-03-22
167	8CMJ\|1\|AA+ 8CMJ\|1\|CC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Translocation intermediate 4 (TI-4*) of 80S S. cerevisiae ribosome with eEF2 in the absence of sordarin	Electron microscopy	3.79	2023-09-20
168	6N8N\|1\|A+ 6N8N\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunit	Electron microscopy	3.8	2019-03-13
169	7NRC\|1\|LA+ 7NRC\|1\|LC	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA (3184-MER), 5.8S rRNA (158-MER)	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A	Electron microscopy	3.9	2021-05-05
170	5MC6\|1\|BQ+ 5MC6\|1\|BS	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae	Electron microscopy	3.8	2017-01-18
171	6GQB\|1\|1+ 6GQB\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S ribosomal RNA, Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)	Electron microscopy	3.9	2018-07-11
172	5JUU\|1\|B+ 5JUU\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)	Electron microscopy	4	2016-10-05
173	6T83\|1\|1b+ 6T83\|1\|3b	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	Electron microscopy	4	2019-12-25
174	5JUT\|1\|B+ 5JUT\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)	Electron microscopy	4	2016-10-05
175	5JUO\|1\|B+ 5JUO\|1\|C	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)	Electron microscopy	4	2016-10-05
176	6T83\|1\|Aa+ 6T83\|1\|Ca	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	Electron microscopy	4	2019-12-25
177	6S05\|1\|A+ 6S05\|1\|y	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	Electron microscopy	3.9	2019-06-26
178	6GQV\|1\|1+ 6GQV\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)	Electron microscopy	4	2018-07-11
179	6FT6\|1\|1+ 6FT6\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 7S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors	Electron microscopy	3.9	2018-03-28
180	6ELZ\|1\|1+ 6ELZ\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmes	Electron microscopy	3.3	2017-12-27
181	5APN\|1\|5+ 5APN\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1	Electron microscopy	3.91	2015-12-16
182	6YLY\|1\|1+ 6YLY\|1\|3	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	pre-60S State NE2 (TAP-Flag-Nop53)	Electron microscopy	3.8	2020-07-29
183	4U4O\|1\|5+ 4U4O\|1\|8	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-ray diffraction	3.6	2014-10-22
184	4U4O\|1\|1+ 4U4O\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-ray diffraction	3.6	2014-10-22
185	6YLX\|1\|1+ 6YLX\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	pre-60S State NE1 (TAP-Flag-Nop53)	Electron microscopy	3.9	2020-07-29
186	5GAK\|1\|1+ 5GAK\|1\|4	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5A	Electron microscopy	3.88	2016-02-24
187	7OHX\|1\|1+ 7OHX\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population A	Electron microscopy	3.3	2021-11-03
188	7OHV\|1\|1+ 7OHV\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population C	Electron microscopy	3.9	2021-11-03
189	6EM1\|1\|1+ 6EM1\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes	Electron microscopy	3.6	2017-12-27
190	6EM3\|1\|1	Large subunit ribosomal RNA	25S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF02543	State A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes	Electron microscopy	3.2	2017-12-27
191	7OHU\|1\|1+ 7OHU\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population B	Electron microscopy	3.7	2021-11-03
192	7OHY\|1\|1+ 7OHY\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population B	Electron microscopy	3.9	2021-11-03
193	7OHW\|1\|1+ 7OHW\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population B	Electron microscopy	3.5	2021-11-03
194	7OHP\|1\|1+ 7OHP\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae S288C	Eukarya	RF02543 + RF00002	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population A	Electron microscopy	3.9	2021-11-03
195	6C0F\|1\|1+ 6C0F\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	5.8S rRNA, Saccharomyces cerevisiae S288c 35S pre-ribosomal RNA miscRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Yeast nucleolar pre-60S ribosomal subunit (state 2)	Electron microscopy	3.7	2018-03-14
196	8E5T\|1\|1+ 8E5T\|1\|2	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S ribosomal RNA, 5.8S ribosomal RNA	Saccharomyces cerevisiae BY4741	Eukarya	RF02543 + RF00002	Yeast co-transcriptional Noc1-Noc2 RNP assembly checkpoint intermediate	Electron microscopy	4	2023-04-12
197	5Z3G\|1\|A+ 5Z3G\|1\|B	Large subunit ribosomal RNA + 5.8S ribosomal RNA	25S rRNA, 5.8S rRNA	Saccharomyces cerevisiae	Eukarya	RF02543 + RF00002	Cryo-EM structure of a nucleolar pre-60S ribosome (Rpf1-TAP)	Electron microscopy	3.65	2018-04-11

Release history

Release	3.301	3.302	3.303	3.304	3.305	3.306	3.307	3.308	3.309	3.310	3.311	3.312	3.313	3.314	3.315	3.316
Date	2023-09-20	2023-09-27	2023-10-04	2023-10-11	2023-10-18	2023-10-25	2023-11-01	2023-11-08	2023-11-15	2023-11-24	2023-11-29	2023-12-06	2023-12-13	2023-12-20	2023-12-27	2024-01-03

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_4.0_90506.63	NR_4.0_90506.62	3.301	(187) 3JCT\|1\|1+3JCT\|1\|2, 4U3M\|1\|1+4U3M\|1\|4, 4U3M\|1\|5+4U3M\|1\|8, 4U3N\|1\|1+4U3N\|1\|4, 4U3N\|1\|5+4U3N\|1\|8, 4U3U\|1\|1+4U3U\|1\|4, 4U3U\|1\|5+4U3U\|1\|8, 4U4N\|1\|1+4U4N\|1\|4, 4U4N\|1\|5+4U4N\|1\|8, 4U4O\|1\|1+4U4O\|1\|4, 4U4O\|1\|5+4U4O\|1\|8, 4U4Q\|1\|1+4U4Q\|1\|4, 4U4Q\|1\|5+4U4Q\|1\|8, 4U4R\|1\|1+4U4R\|1\|4, 4U4R\|1\|5+4U4R\|1\|8, 4U4U\|1\|1+4U4U\|1\|4, 4U4U\|1\|5+4U4U\|1\|8, 4U4Y\|1\|1+4U4Y\|1\|4, 4U4Y\|1\|5+4U4Y\|1\|8, 4U4Z\|1\|1+4U4Z\|1\|4, 4U4Z\|1\|5+4U4Z\|1\|8, 4U50\|1\|1+4U50\|1\|4, 4U50\|1\|5+4U50\|1\|8, 4U51\|1\|1+4U51\|1\|4, 4U51\|1\|5+4U51\|1\|8, 4U52\|1\|1+4U52\|1\|4, 4U52\|1\|5+4U52\|1\|8, 4U53\|1\|1+4U53\|1\|4, 4U53\|1\|5+4U53\|1\|8, 4U55\|1\|1+4U55\|1\|4, 4U55\|1\|5+4U55\|1\|8, 4U56\|1\|1+4U56\|1\|4, 4U56\|1\|5+4U56\|1\|8, 4U6F\|1\|1+4U6F\|1\|4, 4U6F\|1\|5+4U6F\|1\|8, 4V7R\|1\|B1+4V7R\|1\|B3, 4V7R\|1\|D1+4V7R\|1\|D3, 4V88\|1\|A1+4V88\|1\|A4, 4V88\|1\|A5+4V88\|1\|A8, 5APN\|1\|5+5APN\|1\|8, 5APO\|1\|5+5APO\|1\|8, 5DAT\|1\|1+5DAT\|1\|4, 5DAT\|1\|5+5DAT\|1\|8, 5DC3\|1\|1+5DC3\|1\|4, 5DC3\|1\|5+5DC3\|1\|8, 5DGE\|1\|1+5DGE\|1\|4, 5DGE\|1\|5+5DGE\|1\|8, 5DGF\|1\|1+5DGF\|1\|4, 5DGF\|1\|5+5DGF\|1\|8, 5DGV\|1\|1+5DGV\|1\|4, 5DGV\|1\|5+5DGV\|1\|8, 5GAK\|1\|1+5GAK\|1\|4, 5H4P\|1\|1+5H4P\|1\|4, 5I4L\|1\|1+5I4L\|1\|4, 5I4L\|1\|5+5I4L\|1\|8, 5JUO\|1\|B+5JUO\|1\|C, 5JUP\|1\|B+5JUP\|1\|C, 5JUT\|1\|B+5JUT\|1\|C, 5JUU\|1\|B+5JUU\|1\|C, 5LYB\|1\|1+5LYB\|1\|4, 5LYB\|1\|5+5LYB\|1\|8, 5M1J\|1\|14+5M1J\|1\|44, 5MC6\|1\|BQ+5MC6\|1\|BS, 5MEI\|1\|1+5MEI\|1\|4, 5MEI\|1\|AR+5MEI\|1\|AT, 5NDG\|1\|1+5NDG\|1\|4, 5NDG\|1\|5+5NDG\|1\|8, 5NDV\|1\|1+5NDV\|1\|4, 5NDV\|1\|5+5NDV\|1\|8, 5NDW\|1\|1+5NDW\|1\|4, 5NDW\|1\|5+5NDW\|1\|8, 5OBM\|1\|1+5OBM\|1\|4, 5OBM\|1\|5+5OBM\|1\|8, 5ON6\|1\|1+5ON6\|1\|4, 5ON6\|1\|AR+5ON6\|1\|AT, 5T62\|1\|A+5T62\|1\|C, 5TBW\|1\|1+5TBW\|1\|4, 5TBW\|1\|AR+5TBW\|1\|AT, 5TGA\|1\|1+5TGA\|1\|4, 5TGA\|1\|5+5TGA\|1\|8, 5TGM\|1\|1+5TGM\|1\|4, 5TGM\|1\|5+5TGM\|1\|8, 5Z3G\|1\|A+5Z3G\|1\|B, 6C0F\|1\|1+6C0F\|1\|2, 6ELZ\|1\|1+6ELZ\|1\|2, 6EM1\|1\|1+6EM1\|1\|2, 6EM3\|1\|1, 6FT6\|1\|1+6FT6\|1\|2, 6GQB\|1\|1+6GQB\|1\|4, 6GQV\|1\|1+6GQV\|1\|4, 6HD7\|1\|1+6HD7\|1\|4, 6HHQ\|1\|1+6HHQ\|1\|4, 6HHQ\|1\|AR+6HHQ\|1\|AT, 6M62\|1\|1+6M62\|1\|2, 6N8J\|1\|1+6N8J\|1\|3, 6N8K\|1\|1+6N8K\|1\|3, 6N8L\|1\|1+6N8L\|1\|3, 6N8M\|1\|A+6N8M\|1\|C, 6N8N\|1\|A+6N8N\|1\|C, 6N8O\|1\|A+6N8O\|1\|C, 6OIG\|1\|5+6OIG\|1\|8, 6Q8Y\|1\|BQ+6Q8Y\|1\|BS, 6QIK\|1\|A+6QIK\|1\|y, 6QT0\|1\|A+6QT0\|1\|y, 6QTZ\|1\|A+6QTZ\|1\|y, 6R84\|1\|1+6R84\|1\|4, 6R86\|1\|1+6R86\|1\|4, 6R87\|1\|1+6R87\|1\|4, 6RI5\|1\|A+6RI5\|1\|y, 6RZZ\|1\|A+6RZZ\|1\|y, 6S05\|1\|A+6S05\|1\|y, 6S47\|1\|AA+6S47\|1\|AC, 6SNT\|1\|1+6SNT\|1\|3, 6SV4\|1\|BQ+6SV4\|1\|BS, 6SV4\|1\|YQ+6SV4\|1\|YS, 6SV4\|1\|ZQ+6SV4\|1\|ZS, 6T4Q\|1\|C1+6T4Q\|1\|C3, 6T7I\|1\|C1+6T7I\|1\|C3, 6T7T\|1\|C1+6T7T\|1\|C3, 6T83\|1\|1b+6T83\|1\|3b, 6T83\|1\|Aa+6T83\|1\|Ca, 6TB3\|1\|BQ+6TB3\|1\|BS, 6TNU\|1\|BQ+6TNU\|1\|BS, 6WOO\|1\|5+6WOO\|1\|8, 6XIR\|1\|1+6XIR\|1\|4, 6YLG\|1\|1+6YLG\|1\|2, 6YLH\|1\|1+6YLH\|1\|2, 6YLX\|1\|1+6YLX\|1\|2, 6YLY\|1\|1+6YLY\|1\|3, 6Z6J\|1\|C1+6Z6J\|1\|C3, 6Z6K\|1\|C1+6Z6K\|1\|C3, 7AZY\|1\|E+7AZY\|1\|G, 7B7D\|1\|LA+7B7D\|1\|LC, 7BT6\|1\|1+7BT6\|1\|2, 7BTB\|1\|1+7BTB\|1\|2, 7MPI\|1\|A1+7MPI\|1\|A4, 7MPJ\|1\|A1+7MPJ\|1\|A4, 7N8B\|1\|A1+7N8B\|1\|A4, 7NAC\|1\|1+7NAC\|1\|2, 7NRC\|1\|LA+7NRC\|1\|LC, 7OF1\|1\|1+7OF1\|1\|2, 7OH3\|1\|1+7OH3\|1\|2, 7OHP\|1\|1+7OHP\|1\|2, 7OHQ\|1\|1+7OHQ\|1\|2, 7OHU\|1\|1+7OHU\|1\|2, 7OHV\|1\|1+7OHV\|1\|2, 7OHW\|1\|1+7OHW\|1\|2, 7OHX\|1\|1+7OHX\|1\|2, 7OHY\|1\|1+7OHY\|1\|2, 7OSA\|1\|25S+7OSA\|1\|58S, 7OSM\|1\|25S+7OSM\|1\|58S, 7R7A\|1\|1+7R7A\|1\|2, 7RR5\|1\|C1+7RR5\|1\|C3, 7TOO\|1\|A25S+7TOO\|1\|A58S, 7TOP\|1\|A25S+7TOP\|1\|A58S, 7U0H\|1\|1+7U0H\|1\|2, 7UG6\|1\|1+7UG6\|1\|2, 7UOO\|1\|1+7UOO\|1\|2, 7UQB\|1\|1+7UQB\|1\|2, 7UQZ\|1\|1+7UQZ\|1\|2, 7V08\|1\|1+7V08\|1\|2, 7Z34\|1\|1+7Z34\|1\|3, 7ZPQ\|1\|5+7ZPQ\|1\|3, 7ZS5\|1\|1+7ZS5\|1\|4, 7ZUX\|1\|5+7ZUX\|1\|3, 7ZW0\|1\|LA+7ZW0\|1\|LD, 8AAF\|1\|f+8AAF\|1\|i, 8AGT\|1\|f+8AGT\|1\|i, 8AGU\|1\|f+8AGU\|1\|i, 8AGV\|1\|f+8AGV\|1\|i, 8AGW\|1\|f+8AGW\|1\|i, 8AGX\|1\|f+8AGX\|1\|i, 8AGZ\|1\|f+8AGZ\|1\|i, 8BIP\|1\|1+8BIP\|1\|C3, 8BJQ\|1\|1+8BJQ\|1\|C3, 8BQD\|1\|BQ+8BQD\|1\|BS, 8BQX\|1\|BQ+8BQX\|1\|BS, 8E5T\|1\|1+8E5T\|1\|2, 8EUB\|1\|A1+8EUB\|1\|A4, 8EVP\|1\|A1+8EVP\|1\|A4, 8EVQ\|1\|A1+8EVQ\|1\|A4, 8EVR\|1\|A1+8EVR\|1\|A4, 8EVS\|1\|A1+8EVS\|1\|A4, 8EVT\|1\|A1+8EVT\|1\|A4, 8EWB\|1\|A1+8EWB\|1\|A4, 8EWC\|1\|A1+8EWC\|1\|A4, 8HFR\|1\|1e+8HFR\|1\|3n	(10) 8CCS\|1\|AA+8CCS\|1\|CC, 8CDL\|1\|AA+8CDL\|1\|CC, 8CDR\|1\|AA+8CDR\|1\|CC, 8CEH\|1\|AA+8CEH\|1\|CC, 8CF5\|1\|AA+8CF5\|1\|CC, 8CG8\|1\|AA+8CG8\|1\|CC, 8CGN\|1\|AA+8CGN\|1\|CC, 8CIV\|1\|AA+8CIV\|1\|CC, 8CKU\|1\|AA+8CKU\|1\|CC, 8CMJ\|1\|AA+8CMJ\|1\|CC	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	Length
1	6OIG\|1\|5+ 6OIG\|1\|8	Subunit joining exposes nascent pre-40S rRNA for processing and quality control	ELECTRON MICROSCOPY	3.8	3243
2	5JUO\|1\|B+ 5JUO\|1\|C	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure I (fully rotated 40S subunit)	ELECTRON MICROSCOPY	4	3309
3	5JUP\|1\|B+ 5JUP\|1\|C	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)	ELECTRON MICROSCOPY	3.5	3309
4	5JUU\|1\|B+ 5JUU\|1\|C	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure V (least rotated 40S subunit)	ELECTRON MICROSCOPY	4	3307
5	5JUT\|1\|B+ 5JUT\|1\|C	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure IV (almost non-rotated 40S subunit)	ELECTRON MICROSCOPY	4	3309
6	6WOO\|1\|5+ 6WOO\|1\|8	CryoEM structure of yeast 80S ribosome with Met-tRNAiMet, eIF5B, and GDP	ELECTRON MICROSCOPY	2.9	3271
7	8EVP\|1\|A1+ 8EVP\|1\|A4	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure I	ELECTRON MICROSCOPY	2.38	3156
8	8EWC\|1\|A1+ 8EWC\|1\|A4	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), Structure II	ELECTRON MICROSCOPY	2.45	3156
9	8EVS\|1\|A1+ 8EVS\|1\|A4	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure II	ELECTRON MICROSCOPY	2.62	3181
10	8EWB\|1\|A1+ 8EWB\|1\|A4	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure III	ELECTRON MICROSCOPY	2.87	3156
11	8EUB\|1\|A1+ 8EUB\|1\|A4	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure I	ELECTRON MICROSCOPY	2.52	3156
12	8EVQ\|1\|A1+ 8EVQ\|1\|A4	Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I	ELECTRON MICROSCOPY	2.72	3156
13	8EVR\|1\|A1+ 8EVR\|1\|A4	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II	ELECTRON MICROSCOPY	2.87	3178
14	5M1J\|1\|14+ 5M1J\|1\|44	Nonstop ribosomal complex bound with Dom34 and Hbs1	ELECTRON MICROSCOPY	3.3	3295
15	8AGW\|1\|f+ 8AGW\|1\|i	Yeast RQC complex in state D	ELECTRON MICROSCOPY	2.6	3217
16	6R87\|1\|1+ 6R87\|1\|4	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state without Arb1)	ELECTRON MICROSCOPY	3.4	3316
17	6R84\|1\|1+ 6R84\|1\|4	Yeast Vms1 (Q295L)-60S ribosomal subunit complex (pre-state with Arb1)	ELECTRON MICROSCOPY	3.6	3316
18	5APO\|1\|5+ 5APO\|1\|8	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1	ELECTRON MICROSCOPY	3.41	3092
19	5APN\|1\|5+ 5APN\|1\|8	Structure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1	ELECTRON MICROSCOPY	3.91	3092
20	7B7D\|1\|LA+ 7B7D\|1\|LC	Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs	ELECTRON MICROSCOPY	3.3	3223
21	7ZS5\|1\|1+ 7ZS5\|1\|4	Structure of 60S ribosomal subunit from S. cerevisiae with eIF6 and tRNA	ELECTRON MICROSCOPY	3.2	3248
22	6R86\|1\|1+ 6R86\|1\|4	Yeast Vms1-60S ribosomal subunit complex (post-state)	ELECTRON MICROSCOPY	3.4	3260
23	6QT0\|1\|A+ 6QT0\|1\|y	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.4	3164
24	5NDV\|1\|5+ 5NDV\|1\|8	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	3087
25	5OBM\|1\|5+ 5OBM\|1\|8	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	3134
26	4U4O\|1\|5+ 4U4O\|1\|8	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.6	3150
27	4U56\|1\|5+ 4U56\|1\|8	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	3150
28	4U55\|1\|5+ 4U55\|1\|8	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3150
29	4U4Z\|1\|5+ 4U4Z\|1\|8	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3150
30	4U4N\|1\|5+ 4U4N\|1\|8	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3150
31	5I4L\|1\|5+ 5I4L\|1\|8	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3150
32	5TGA\|1\|5+ 5TGA\|1\|8	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	3152
33	5LYB\|1\|5+ 5LYB\|1\|8	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	3150
34	4V88\|1\|A5+ 4V88\|1\|A8	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	3150
35	4U4R\|1\|5+ 4U4R\|1\|8	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	3150
36	4U3U\|1\|5+ 4U3U\|1\|8	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	3150
37	4U3N\|1\|5+ 4U3N\|1\|8	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3151
38	4U4Y\|1\|5+ 4U4Y\|1\|8	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3150
39	4U3M\|1\|5+ 4U3M\|1\|8	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3150
40	4U6F\|1\|5+ 4U6F\|1\|8	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3150
41	4U52\|1\|5+ 4U52\|1\|8	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3150
42	4U4Q\|1\|5+ 4U4Q\|1\|8	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3150
43	4U4U\|1\|5+ 4U4U\|1\|8	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3150
44	4U51\|1\|5+ 4U51\|1\|8	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3150
45	4U53\|1\|5+ 4U53\|1\|8	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	3150
46	4U50\|1\|5+ 4U50\|1\|8	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3150
47	5TGM\|1\|5+ 5TGM\|1\|8	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	3150
48	5DGV\|1\|5+ 5DGV\|1\|8	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	3149
49	5DGE\|1\|5+ 5DGE\|1\|8	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	3150
50	5DGF\|1\|5+ 5DGF\|1\|8	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	3169
51	5DAT\|1\|5+ 5DAT\|1\|8	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	3169
52	5DC3\|1\|5+ 5DC3\|1\|8	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	3169
53	5TBW\|1\|AR+ 5TBW\|1\|AT	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3149
54	6HHQ\|1\|AR+ 6HHQ\|1\|AT	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3147
55	5ON6\|1\|AR+ 5ON6\|1\|AT	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	3149
56	5MEI\|1\|AR+ 5MEI\|1\|AT	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	3149
57	6SV4\|1\|ZQ+ 6SV4\|1\|ZS	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	3127
58	6SV4\|1\|YQ+ 6SV4\|1\|YS	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	3127
59	6SV4\|1\|BQ+ 6SV4\|1\|BS	The cryo-EM structure of SDD1-stalled collided trisome.	ELECTRON MICROSCOPY	3.3	3127
60	6T83\|1\|Aa+ 6T83\|1\|Ca	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	ELECTRON MICROSCOPY	4	3127
61	5NDG\|1\|5+ 5NDG\|1\|8	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	3127
62	5NDW\|1\|5+ 5NDW\|1\|8	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	3080
63	7MPJ\|1\|A1+ 7MPJ\|1\|A4	Stm1 bound vacant 80S structure isolated from nop1-D243A	ELECTRON MICROSCOPY	2.7	3067
64	7MPI\|1\|A1+ 7MPI\|1\|A4	Stm1 bound vacant 80S structure isolated from cbf5-D95A	ELECTRON MICROSCOPY	3.05	3096
65	7N8B\|1\|A1+ 7N8B\|1\|A4	Cycloheximide bound vacant 80S structure isolated from cbf5-D95A	ELECTRON MICROSCOPY	3.05	3115
66	8EVT\|1\|A1+ 8EVT\|1\|A4	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES) refined against a composite map	ELECTRON MICROSCOPY	2.2	3176
67	6Z6J\|1\|C1+ 6Z6J\|1\|C3	Cryo-EM structure of yeast Lso2 bound to 80S ribosomes under native condition	ELECTRON MICROSCOPY	3.4	3127
68	6Z6K\|1\|C1+ 6Z6K\|1\|C3	Cryo-EM structure of yeast reconstituted Lso2 bound to 80S ribosomes	ELECTRON MICROSCOPY	3.4	3127
69	7TOP\|1\|A25S+ 7TOP\|1\|A58S	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20	ELECTRON MICROSCOPY	2.4	3194
70	7TOO\|1\|A25S+ 7TOO\|1\|A58S	Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20	ELECTRON MICROSCOPY	2.7	3194
71	7RR5\|1\|C1+ 7RR5\|1\|C3	Structure of ribosomal complex bound with Rbg1/Tma46	ELECTRON MICROSCOPY	3.23	3221
72	8BQX\|1\|BQ+ 8BQX\|1\|BS	Yeast 80S ribosome in complex with Map1 (conformation 2)	ELECTRON MICROSCOPY	3.8	3301
73	7NRC\|1\|LA+ 7NRC\|1\|LC	Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A	ELECTRON MICROSCOPY	3.9	3184
74	6TNU\|1\|BQ+ 6TNU\|1\|BS	Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.	ELECTRON MICROSCOPY	3.1	3184
75	8BQD\|1\|BQ+ 8BQD\|1\|BS	Yeast 80S ribosome in complex with Map1 (conformation 1)	ELECTRON MICROSCOPY	3.9	3299
76	5MC6\|1\|BQ+ 5MC6\|1\|BS	Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae	ELECTRON MICROSCOPY	3.8	3165
77	6Q8Y\|1\|BQ+ 6Q8Y\|1\|BS	Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complex	ELECTRON MICROSCOPY	3.1	3161
78	7AZY\|1\|E+ 7AZY\|1\|G	Context-specific inhibition of eukaryotic translation by macrolide antibiotics	ELECTRON MICROSCOPY	2.877	3161
79	7ZW0\|1\|LA+ 7ZW0\|1\|LD	FAP-80S Complex - Rotated state	ELECTRON MICROSCOPY	2.4	3217
80	5H4P\|1\|1+ 5H4P\|1\|4	Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1	ELECTRON MICROSCOPY	3.07	3091
81	7ZUX\|1\|5+ 7ZUX\|1\|3	Collided ribosome in a disome unit from S. cerevisiae	ELECTRON MICROSCOPY	2.5	3163
82	8BIP\|1\|1+ 8BIP\|1\|C3	Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex	ELECTRON MICROSCOPY	3.1	3301
83	8BJQ\|1\|1+ 8BJQ\|1\|C3	Structure of a yeast 80S ribosome-bound N-Acetyltransferase B complex	ELECTRON MICROSCOPY	3.8	3301
84	7ZPQ\|1\|5+ 7ZPQ\|1\|3	Structure of the RQT-bound 80S ribosome from S. cerevisiae (C1)	ELECTRON MICROSCOPY	3.47	3184
85	6T7I\|1\|C1+ 6T7I\|1\|C3	Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.	ELECTRON MICROSCOPY	3.2	3184
86	6T7T\|1\|C1+ 6T7T\|1\|C3	Structure of yeast 80S ribosome stalled on poly(A) tract.	ELECTRON MICROSCOPY	3.1	3184
87	6T4Q\|1\|C1+ 6T4Q\|1\|C3	Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.	ELECTRON MICROSCOPY	2.6	3184
88	6SNT\|1\|1+ 6SNT\|1\|3	Yeast 80S ribosome stalled on SDD1 mRNA.	ELECTRON MICROSCOPY	2.8	3184
89	6TB3\|1\|BQ+ 6TB3\|1\|BS	yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complex	ELECTRON MICROSCOPY	2.8	3223
90	6T83\|1\|1b+ 6T83\|1\|3b	Structure of yeast disome (di-ribosome) stalled on poly(A) tract.	ELECTRON MICROSCOPY	4	3184
91	6S47\|1\|AA+ 6S47\|1\|AC	Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1	ELECTRON MICROSCOPY	3.28	3149
92	5OBM\|1\|1+ 5OBM\|1\|4	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	3100
93	4U4O\|1\|1+ 4U4O\|1\|4	Crystal structure of Geneticin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.6	3149
94	5MEI\|1\|1+ 5MEI\|1\|4	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	3149
95	5ON6\|1\|1+ 5ON6\|1\|4	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	3149
96	6HHQ\|1\|1+ 6HHQ\|1\|4	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3149
97	4U56\|1\|1+ 4U56\|1\|4	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	3149
98	4U4Z\|1\|1+ 4U4Z\|1\|4	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3149
99	4U55\|1\|1+ 4U55\|1\|4	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3149
100	4U4N\|1\|1+ 4U4N\|1\|4	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3149
101	5I4L\|1\|1+ 5I4L\|1\|4	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3149
102	4U4U\|1\|1+ 4U4U\|1\|4	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3149
103	4U4Q\|1\|1+ 4U4Q\|1\|4	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3149
104	4U51\|1\|1+ 4U51\|1\|4	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3149
105	4U53\|1\|1+ 4U53\|1\|4	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	3149
106	4U50\|1\|1+ 4U50\|1\|4	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3149
107	4U52\|1\|1+ 4U52\|1\|4	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3149
108	4U6F\|1\|1+ 4U6F\|1\|4	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	3149
109	4U3M\|1\|1+ 4U3M\|1\|4	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3149
110	4U4Y\|1\|1+ 4U4Y\|1\|4	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3149
111	4U3N\|1\|1+ 4U3N\|1\|4	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	3150
112	4U3U\|1\|1+ 4U3U\|1\|4	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	3149
113	4U4R\|1\|1+ 4U4R\|1\|4	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	3149
114	4V88\|1\|A1+ 4V88\|1\|A4	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	3149
115	5LYB\|1\|1+ 5LYB\|1\|4	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	3149
116	5TGA\|1\|1+ 5TGA\|1\|4	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	3151
117	5TGM\|1\|1+ 5TGM\|1\|4	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	3149
118	5DGV\|1\|1+ 5DGV\|1\|4	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	3148
119	5DGE\|1\|1+ 5DGE\|1\|4	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	3149
120	5TBW\|1\|1+ 5TBW\|1\|4	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	3149
121	5DC3\|1\|1+ 5DC3\|1\|4	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	3149
122	5DAT\|1\|1+ 5DAT\|1\|4	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	3149
123	5DGF\|1\|1+ 5DGF\|1\|4	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	3149
124	5NDG\|1\|1+ 5NDG\|1\|4	Crystal structure of geneticin (G418) bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	3078
125	5NDW\|1\|1+ 5NDW\|1\|4	Crystal structure of aminoglycoside TC007 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.7	3090
126	5NDV\|1\|1+ 5NDV\|1\|4	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	3078
127	8AGX\|1\|f+ 8AGX\|1\|i	Yeast RQC complex in state with the RING domain of Ltn1 in the IN position	ELECTRON MICROSCOPY	2.4	3216
128	8AGZ\|1\|f+ 8AGZ\|1\|i	Yeast RQC complex in state with the RING domain of Ltn1 in the OUT position	ELECTRON MICROSCOPY	2.6	3216
129	8AGT\|1\|f+ 8AGT\|1\|i	Yeast RQC complex in state F	ELECTRON MICROSCOPY	2.6	3217
130	8AAF\|1\|f+ 8AAF\|1\|i	Yeast RQC complex in state G	ELECTRON MICROSCOPY	2.5	3217
131	8AGV\|1\|f+ 8AGV\|1\|i	Yeast RQC complex in state H	ELECTRON MICROSCOPY	2.6	3217
132	8AGU\|1\|f+ 8AGU\|1\|i	Yeast RQC complex in state E	ELECTRON MICROSCOPY	2.7	3216
133	5GAK\|1\|1+ 5GAK\|1\|4	Yeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5A	ELECTRON MICROSCOPY	3.88	3165
134	6HD7\|1\|1+ 6HD7\|1\|4	Cryo-EM structure of the ribosome-NatA complex	ELECTRON MICROSCOPY	3.4	3335
135	5T62\|1\|A+ 5T62\|1\|C	Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis: 60S-Nmd3-Tif6-Lsg1 Complex	ELECTRON MICROSCOPY	3.1	3200
136	6N8O\|1\|A+ 6N8O\|1\|C	Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.5	3201
137	6QTZ\|1\|A+ 6QTZ\|1\|y	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.5	3146
138	6RI5\|1\|A+ 6RI5\|1\|y	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.3	3147
139	8CGN\|1\|AA+ 8CGN\|1\|CC	Non-rotated 80S S. cerevisiae ribosome with ligands	ELECTRON MICROSCOPY	2.28	3155
140	8CIV\|1\|AA+ 8CIV\|1\|CC	Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	ELECTRON MICROSCOPY	2.47	3155
141	8CEH\|1\|AA+ 8CEH\|1\|CC	Translocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	ELECTRON MICROSCOPY	2.05	3155
142	8CDR\|1\|AA+ 8CDR\|1\|CC	Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	ELECTRON MICROSCOPY	2.04	3155
143	8CG8\|1\|AA+ 8CG8\|1\|CC	Translocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	ELECTRON MICROSCOPY	2.57	3155
144	8CMJ\|1\|AA+ 8CMJ\|1\|CC	Translocation intermediate 4 (TI-4*) of 80S S. cerevisiae ribosome with eEF2 in the absence of sordarin	ELECTRON MICROSCOPY	3.79	3155
145	7OSM\|1\|25S+ 7OSM\|1\|58S	Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-RAY DIFFRACTION	3	3162
146	7OSA\|1\|25S+ 7OSA\|1\|58S	Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands	X-RAY DIFFRACTION	3	3180
147	8CDL\|1\|AA+ 8CDL\|1\|CC	80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complex	ELECTRON MICROSCOPY	2.72	3148
148	8CCS\|1\|AA+ 8CCS\|1\|CC	80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex	ELECTRON MICROSCOPY	1.97	3148
149	8CF5\|1\|AA+ 8CF5\|1\|CC	Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin	ELECTRON MICROSCOPY	2.71	3148
150	8CKU\|1\|AA+ 8CKU\|1\|CC	Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin	ELECTRON MICROSCOPY	3.11	3148
151	6GQB\|1\|1+ 6GQB\|1\|4	Cryo-EM reconstruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GDP+AlF4/sordarin)	ELECTRON MICROSCOPY	3.9	3223
152	6GQV\|1\|1+ 6GQV\|1\|4	Cryo-EM recosntruction of yeast 80S ribosome in complex with mRNA, tRNA and eEF2 (GMPPCP)	ELECTRON MICROSCOPY	4	3223
153	6XIR\|1\|1+ 6XIR\|1\|4	Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative Stress	ELECTRON MICROSCOPY	3.2	3113
154	4V7R\|1\|B1+ 4V7R\|1\|B3	Yeast 80S ribosome.	X-RAY DIFFRACTION	4	3206
155	4V7R\|1\|D1+ 4V7R\|1\|D3	Yeast 80S ribosome.	X-RAY DIFFRACTION	4	3206
156	6S05\|1\|A+ 6S05\|1\|y	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.9	3146
157	6RZZ\|1\|A+ 6RZZ\|1\|y	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.2	3146
158	6QIK\|1\|A+ 6QIK\|1\|y	Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles	ELECTRON MICROSCOPY	3.1	3146
159	6N8N\|1\|A+ 6N8N\|1\|C	Cryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.8	3203
160	6N8M\|1\|A+ 6N8M\|1\|C	Cryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.5	3203
161	6N8L\|1\|1+ 6N8L\|1\|3	Cryo-EM structure of early cytoplasmic-late (ECL) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.6	3201
162	7Z34\|1\|1+ 7Z34\|1\|3	Structure of pre-60S particle bound to DRG1(AFG2)	ELECTRON MICROSCOPY	3.8	3347
163	6N8K\|1\|1+ 6N8K\|1\|3	Cryo-EM structure of early cytoplasmic-immediate (ECI) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.6	3201
164	8HFR\|1\|1e+ 8HFR\|1\|3n	NPC-trapped pre-60S particle	ELECTRON MICROSCOPY	2.64	3274
165	6YLH\|1\|1+ 6YLH\|1\|2	Rix1-Rea1 pre-60S particle - full composite structure	ELECTRON MICROSCOPY	3.1	3039
166	6YLG\|1\|1+ 6YLG\|1\|2	Rix1-Rea1 pre-60S particle - 60S core, body 1 (rigid body refinement)	ELECTRON MICROSCOPY	3	3039
167	7OF1\|1\|1+ 7OF1\|1\|2	Nog1-TAP associated immature ribosomal particle population A from S. cerevisiae	ELECTRON MICROSCOPY	3.1	2787
168	6N8J\|1\|1+ 6N8J\|1\|3	Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunit	ELECTRON MICROSCOPY	3.5	3047
169	6YLY\|1\|1+ 6YLY\|1\|3	pre-60S State NE2 (TAP-Flag-Nop53)	ELECTRON MICROSCOPY	3.8	2676
170	7UQB\|1\|1+ 7UQB\|1\|2	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1-D52A strain with AlF4	ELECTRON MICROSCOPY	2.43	2936
171	7UQZ\|1\|1+ 7UQZ\|1\|2	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a SPB1 D52A strain	ELECTRON MICROSCOPY	2.44	2933
172	7V08\|1\|1+ 7V08\|1\|2	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state from a Spb1 D52A suppressor 3 strain	ELECTRON MICROSCOPY	2.36	2933
173	7UOO\|1\|1+ 7UOO\|1\|2	Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state	ELECTRON MICROSCOPY	2.34	2935
174	7BTB\|1\|1+ 7BTB\|1\|2	Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.22 Angstroms resolution(state R2)	ELECTRON MICROSCOPY	3.22	3058
175	3JCT\|1\|1+ 3JCT\|1\|2	Cryo-em structure of eukaryotic pre-60S ribosomal subunits	ELECTRON MICROSCOPY	3.08	3058
176	6FT6\|1\|1+ 6FT6\|1\|2	Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors	ELECTRON MICROSCOPY	3.9	3058
177	7UG6\|1\|1+ 7UG6\|1\|2	Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922	ELECTRON MICROSCOPY	2.9	3058
178	7OHQ\|1\|1+ 7OHQ\|1\|2	Nog1-TAP associated immature ribosomal particle population C from S. cerevisiae	ELECTRON MICROSCOPY	3.1	3053
179	7OH3\|1\|1+ 7OH3\|1\|2	Nog1-TAP associated immature ribosomal particle population B from S. cerevisiae	ELECTRON MICROSCOPY	3.4	3013
180	6M62\|1\|1+ 6M62\|1\|2	Cryo-Em structure of eukaryotic pre-60S ribosome subunit from Saccharomyces cerevisiae rpf2 delta 255-344 strain, C4 state.	ELECTRON MICROSCOPY	3.2	2972
181	7BT6\|1\|1+ 7BT6\|1\|2	Cryo-EM structure of pre-60S ribosome from Saccharomyces cerevisiae rpl4delta63-87 strain at 3.12 Angstroms resolution(state R1)	ELECTRON MICROSCOPY	3.12	2962
182	6YLX\|1\|1+ 6YLX\|1\|2	pre-60S State NE1 (TAP-Flag-Nop53)	ELECTRON MICROSCOPY	3.9	2534
183	7U0H\|1\|1+ 7U0H\|1\|2	State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model	ELECTRON MICROSCOPY	2.76	2722
184	7OHV\|1\|1+ 7OHV\|1\|2	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population C	ELECTRON MICROSCOPY	3.9	2141
185	6ELZ\|1\|1+ 6ELZ\|1\|2	State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosmes	ELECTRON MICROSCOPY	3.3	2457
186	7NAC\|1\|1+ 7NAC\|1\|2	State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model	ELECTRON MICROSCOPY	3.04	2657
187	7R7A\|1\|1+ 7R7A\|1\|2	State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model	ELECTRON MICROSCOPY	3.04	2571
188	7OHY\|1\|1+ 7OHY\|1\|2	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population B	ELECTRON MICROSCOPY	3.9	1689
189	7OHU\|1\|1+ 7OHU\|1\|2	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population B	ELECTRON MICROSCOPY	3.7	1692
190	7OHP\|1\|1+ 7OHP\|1\|2	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population A	ELECTRON MICROSCOPY	3.9	1567
191	7OHW\|1\|1+ 7OHW\|1\|2	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut down, population B	ELECTRON MICROSCOPY	3.5	1639
192	7OHX\|1\|1+ 7OHX\|1\|2	Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut down, population A	ELECTRON MICROSCOPY	3.3	1561
193	6EM1\|1\|1+ 6EM1\|1\|2	State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes	ELECTRON MICROSCOPY	3.6	1785
194	5Z3G\|1\|A+ 5Z3G\|1\|B	Cryo-EM structure of a nucleolar pre-60S ribosome (Rpf1-TAP)	ELECTRON MICROSCOPY	3.65	1501
195	6C0F\|1\|1+ 6C0F\|1\|2	Yeast nucleolar pre-60S ribosomal subunit (state 2)	ELECTRON MICROSCOPY	3.7	1357
196	8E5T\|1\|1+ 8E5T\|1\|2	Yeast co-transcriptional Noc1-Noc2 RNP assembly checkpoint intermediate	ELECTRON MICROSCOPY	4	743
197	6EM3\|1\|1	State A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes	ELECTRON MICROSCOPY	3.2	1250

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_4.0_90506.63 Obsolete

Release history

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