BGSU RNA Site //

Equivalence class NR_4.0_90633.8 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodÅDate
15HL7|1|X (rep)Large subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lefamulinX-ray diffraction3.552016-12-21
24WCE|1|XLarge subunit ribosomal RNA23S rRNAStaphylococcus aureusBacteriaRF02541The crystal structure of the large ribosomal subunit of Staphylococcus aureusX-ray diffraction3.532015-10-21
34WF9|1|XLarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycinX-ray diffraction3.432015-10-21
44WFB|1|XLarge subunit ribosomal RNA23S rRNAStaphylococcus aureusBacteriaRF02541The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205X-ray diffraction3.432015-10-21
54WFA|1|XLarge subunit ribosomal RNA23S rRNAStaphylococcus aureusBacteriaRF02541The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolidX-ray diffraction3.392015-10-21
65NRG|1|XLarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02X-ray diffraction3.442017-08-09
75HKV|1|XLarge subunit ribosomal RNA23s ribosomal RNAStaphylococcus aureusBacteriaRF02541The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lincomycinX-ray diffraction3.662017-05-03
85ND8|1|ALarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541Hibernating ribosome from Staphylococcus aureus (Unrotated state)Electron microscopy3.72017-06-28
95LI0|1|ALarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF0254170S ribosome from Staphylococcus aureusElectron microscopy3.82016-12-28
105ND9|1|ALarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541Hibernating ribosome from Staphylococcus aureus (Rotated state)Electron microscopy3.72017-06-28
115T7V|1|BLarge subunit ribosomal RNA23S ribosomal RNAStaphylococcus aureusBacteriaRF02541Methicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)Electron microscopy3.62017-05-31
125TCU|1|BLarge subunit ribosomal RNA23S RRNAStaphylococcus aureusBacteriaRF02541Methicillin sensitive Staphylococcus aureus 70S ribosomeElectron microscopy3.92017-05-24

Release history

Release2.1412.1422.1432.1442.1452.1462.1472.148
Date2017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-30

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_90633.8NR_4.0_90633.72.141(11) 5TCU|1|B, 5T7V|1|B, 5ND9|1|A, 5ND8|1|A, 5LI0|1|A, 5HL7|1|X, 5HKV|1|X, 4WFB|1|X, 4WFA|1|X, 4WF9|1|X, 4WCE|1|X(1) 5NRG|1|X(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_90633.8NR_4.0_90633.92.149(12) 5T7V|1|B, 5NRG|1|X, 5ND9|1|A, 5ND8|1|A, 5LI0|1|A, 5HL7|1|X, 5HKV|1|X, 4WFB|1|X, 4WFA|1|X, 4WF9|1|X, 4WCE|1|X, 5TCU|1|B(0) (1) 5NGM|1|AA

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15NRG|1|XThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02X-RAY DIFFRACTION3.442711
25HKV|1|XThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lincomycinX-RAY DIFFRACTION3.662695
35HL7|1|XThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lefamulinX-RAY DIFFRACTION3.552705
44WCE|1|XThe crystal structure of the large ribosomal subunit of Staphylococcus aureusX-RAY DIFFRACTION3.532708
54WFA|1|XThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with linezolidX-RAY DIFFRACTION3.392711
64WFB|1|XThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with BC-3205X-RAY DIFFRACTION3.432707
74WF9|1|XThe crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with telithromycinX-RAY DIFFRACTION3.432712
85LI0|1|A70S ribosome from Staphylococcus aureusELECTRON MICROSCOPY3.82914
95ND8|1|AHibernating ribosome from Staphylococcus aureus (Unrotated state)ELECTRON MICROSCOPY3.72912
105ND9|1|AHibernating ribosome from Staphylococcus aureus (Rotated state)ELECTRON MICROSCOPY3.72914
115TCU|1|BMethicillin sensitive Staphylococcus aureus 70S ribosomeELECTRON MICROSCOPY3.92755
125T7V|1|BMethicillin Resistant, Linezolid resistant Staphylococcus aureus 70S ribosome (delta S145 uL3)ELECTRON MICROSCOPY3.62768
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