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Equivalence class NR_4.0_90840.3 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14ZDO|1|E (rep)Selenocysteine transfer RNAselenocysteine tRNAHomo sapiensEukaryaRF01852The crystal structure of T325S mutant of human SepSecS in complex with selenocysteine tRNA (tRNASec)X-ray diffraction2.652016-04-20
23A3A|1|ASelenocysteine transfer RNAselenocysteine tRNAHomo sapiensEukaryaRF01852Crystal structure of human selenocystine tRNAX-ray diffraction3.12009-08-11
34RQE|1|BSelenocysteine transfer RNAselenocysteine tRNAHomo sapiensEukaryaRF01852human Seryl-tRNA synthetase dimer complexed with two molecules of tRNAsecX-ray diffraction42015-11-04
44RQE|1|DSelenocysteine transfer RNAselenocysteine tRNAHomo sapiensEukaryaRF01852human Seryl-tRNA synthetase dimer complexed with two molecules of tRNAsecX-ray diffraction42015-11-04
54ZDP|1|ESelenocysteine transfer RNAselenocysteine tRNAHomo sapiensEukaryaRF01852The crystal structure of Y334C mutant of human SepSecS in complex with selenocysteine tRNA (tRNASec)X-ray diffraction2.72016-04-20
64RQF|1|CSelenocysteine transfer RNAselenocysteine tRNAHomo sapiensEukaryaRF01852human Seryl-tRNA synthetase dimer complexed with one molecule of tRNAsecX-ray diffraction3.52015-11-04
73HL2|1|ESelenocysteine transfer RNAtRNASecHomo sapiensEukaryaRF01852The crystal structure of the human SepSecS-tRNASec complexX-ray diffraction2.812009-10-06
87ZJW|1|FSelenocysteine transfer RNAhuman Ser-tRNA-SecHomo sapiensEukaryaRF01852Rabbit 80S ribosome as it decodes the Sec-UGA codonElectron microscopy2.82022-10-19

Release history

Release3.2533.2543.255
Date2022-10-192022-10-262022-11-02

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_90840.3NR_4.0_90840.23.253(7) 4RQE|1|B, 3HL2|1|E, 3A3A|1|A, 4ZDP|1|E, 4ZDO|1|E, 4RQF|1|C, 4RQE|1|D(1) 7ZJW|1|F(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_90840.3NR_4.0_90840.43.256(8) 3A3A|1|A, 7ZJW|1|F, 4ZDP|1|E, 4ZDO|1|E, 4RQF|1|C, 4RQE|1|D, 4RQE|1|B, 3HL2|1|E(0) (1) 7MDL|1|E

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14ZDO|1|EThe crystal structure of T325S mutant of human SepSecS in complex with selenocysteine tRNA (tRNASec)X-RAY DIFFRACTION2.65150
24ZDP|1|EThe crystal structure of Y334C mutant of human SepSecS in complex with selenocysteine tRNA (tRNASec)X-RAY DIFFRACTION2.7148
33HL2|1|EThe crystal structure of the human SepSecS-tRNASec complexX-RAY DIFFRACTION2.81164
43A3A|1|ACrystal structure of human selenocystine tRNAX-RAY DIFFRACTION3.186
54RQF|1|Chuman Seryl-tRNA synthetase dimer complexed with one molecule of tRNAsecX-RAY DIFFRACTION3.563
64RQE|1|Bhuman Seryl-tRNA synthetase dimer complexed with two molecules of tRNAsecX-RAY DIFFRACTION484
74RQE|1|Dhuman Seryl-tRNA synthetase dimer complexed with two molecules of tRNAsecX-RAY DIFFRACTION483
87ZJW|1|FRabbit 80S ribosome as it decodes the Sec-UGA codonELECTRON MICROSCOPY2.890
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