Equivalence class NR_4.0_92888.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7Y9X|1|R (rep) | crRNA | Desulfonema ishimotonii | Structure of the Cas7-11-Csx29-guide RNA complex | Electron microscopy | 2.49 | 38 | 2022-11-09 | |||
| 2 | 8EEY|1|C+ 8EEY|1|D | crRNA, DR-mismatched target RNA | Desulfonema ishimotonii | Cas7-11 in complex with DR-mismatched target RNA, Csx29 and Csx30 | Electron microscopy | 2.53 | 66 | 2022-11-16 | |||
| 3 | 7WAH|1|R+ 7WAH|1|D | crRNA (39-MER), tgRNA (5'-R(P*UP*AP*CP*CP*CP*AP*UP*GP*UP*CP*GP*AP*AP*GP*AP*CP*AP*AP*CP*AP*AP*AP*G)-3') | Escherichia coli | Structure of Cas7-11 in complex with guide RNA and target RNA | Electron microscopy | 2.45 | 62 | 2022-06-15 | |||
| 4 | 7Y9Y|1|R+ 7Y9Y|1|D | RNA (27-MER), RNA (38-MER) | Desulfonema ishimotonii | Structure of the Cas7-11-Csx29-guide RNA-target RNA (no PFS) complex | Electron microscopy | 2.77 | 61 | 2022-11-09 | |||
| 5 | 8EEX|1|C | crRNA | Desulfonema ishimotonii | Cas7-11 in complex with Csx29 | Electron microscopy | 2.95 | 36 | 2022-11-16 |
Release history
| Release | 3.257 | 3.258 | 3.259 | 3.260 | 3.261 | 3.262 | 3.263 | 3.264 | 3.265 | 3.266 | 3.267 | 3.268 | 3.269 | 3.270 | 3.271 | 3.272 | 3.273 | 3.274 | 3.275 | 3.276 | 3.277 | 3.278 | 3.279 | 3.280 | 3.281 | 3.282 | 3.283 | 3.284 | 3.285 | 3.286 | 3.287 | 3.288 | 3.289 | 3.290 | 3.291 | 3.292 | 3.293 | 3.294 | 3.295 | 3.296 | 3.297 | 3.298 | 3.299 | 3.300 | 3.301 | 3.302 | 3.303 | 3.304 | 3.305 | 3.306 | 3.307 | 3.308 | 3.309 | 3.310 | 3.311 | 3.312 | 3.313 | 3.314 | 3.315 | 3.316 | 3.317 | 3.318 | 3.319 | 3.320 | 3.321 | 3.322 | 3.323 | 3.324 | 3.325 | 3.326 | 3.327 | 3.328 | 3.329 | 3.330 | 3.331 | 3.332 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-11-16 | 2022-11-23 | 2022-11-30 | 2022-12-07 | 2022-12-14 | 2022-12-21 | 2022-12-28 | 2023-01-04 | 2023-01-11 | 2023-01-18 | 2023-01-25 | 2023-02-01 | 2023-02-08 | 2023-02-15 | 2023-02-22 | 2023-03-01 | 2023-03-08 | 2023-03-15 | 2023-03-22 | 2023-03-29 | 2023-04-05 | 2023-04-12 | 2023-04-19 | 2023-04-26 | 2023-05-03 | 2023-05-10 | 2023-05-17 | 2023-05-24 | 2023-05-31 | 2023-06-07 | 2023-06-14 | 2023-06-21 | 2023-06-28 | 2023-07-05 | 2023-07-12 | 2023-07-19 | 2023-07-26 | 2023-08-02 | 2023-08-09 | 2023-08-16 | 2023-08-23 | 2023-08-30 | 2023-09-06 | 2023-09-13 | 2023-09-20 | 2023-09-27 | 2023-10-04 | 2023-10-11 | 2023-10-18 | 2023-10-25 | 2023-11-01 | 2023-11-08 | 2023-11-15 | 2023-11-24 | 2023-11-29 | 2023-12-06 | 2023-12-13 | 2023-12-20 | 2023-12-27 | 2024-01-03 | 2024-01-10 | 2024-01-17 | 2024-01-24 | 2024-01-31 | 2024-02-07 | 2024-02-14 | 2024-02-21 | 2024-02-28 | 2024-03-06 | 2024-03-13 | 2024-03-20 | 2024-03-27 | 2024-04-03 | 2024-04-10 | 2024-04-17 | 2024-04-24 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_92888.1 | NR_4.0_15875.1 | 3.257 | (3) 7WAH|1|R+7WAH|1|D, 7Y9X|1|R, 7Y9Y|1|R+7Y9Y|1|D | (2) 8EEX|1|C, 8EEY|1|C+8EEY|1|D | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 7WAH|1|R+ 7WAH|1|D | Structure of Cas7-11 in complex with guide RNA and target RNA | ELECTRON MICROSCOPY | 2.45 | 62 | |
| 2 | 8EEY|1|C+ 8EEY|1|D | Cas7-11 in complex with DR-mismatched target RNA, Csx29 and Csx30 | ELECTRON MICROSCOPY | 2.53 | 66 | |
| 3 | 7Y9Y|1|R+ 7Y9Y|1|D | Structure of the Cas7-11-Csx29-guide RNA-target RNA (no PFS) complex | ELECTRON MICROSCOPY | 2.77 | 61 | |
| 4 | 7Y9X|1|R | Structure of the Cas7-11-Csx29-guide RNA complex | ELECTRON MICROSCOPY | 2.49 | 38 | |
| 5 | 8EEX|1|C | Cas7-11 in complex with Csx29 | ELECTRON MICROSCOPY | 2.95 | 36 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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