Equivalence class NR_4.0_92888.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7Y9X|1|R (rep) | crRNA | Desulfonema ishimotonii | Structure of the Cas7-11-Csx29-guide RNA complex | Electron microscopy | 2.49 | 2022-11-09 | |||
| 2 | 8EEY|1|C+ 8EEY|1|D | crRNA, DR-mismatched target RNA | Desulfonema ishimotonii | Cas7-11 in complex with DR-mismatched target RNA, Csx29 and Csx30 | Electron microscopy | 2.53 | 2022-11-16 | |||
| 3 | 7WAH|1|R+ 7WAH|1|D | crRNA (39-MER), tgRNA (5'-R(P*UP*AP*CP*CP*CP*AP*UP*GP*UP*CP*GP*AP*AP*GP*AP*CP*AP*AP*CP*AP*AP*AP*G)-3') | Escherichia coli | Structure of Cas7-11 in complex with guide RNA and target RNA | Electron microscopy | 2.45 | 2022-06-15 | |||
| 4 | 7Y9Y|1|R+ 7Y9Y|1|D | RNA (38-MER), RNA (27-MER) | Desulfonema ishimotonii | Structure of the Cas7-11-Csx29-guide RNA-target RNA (no PFS) complex | Electron microscopy | 2.77 | 2022-11-09 | |||
| 5 | 8EEX|1|C | crRNA | Desulfonema ishimotonii | Cas7-11 in complex with Csx29 | Electron microscopy | 2.95 | 2022-11-16 |
Release history
| Release | 3.257 | 3.258 | 3.259 | 3.260 | 3.261 | 3.262 | 3.263 | 3.264 | 3.265 | 3.266 | 3.267 | 3.268 | 3.269 | 3.270 | 3.271 | 3.272 | 3.273 | 3.274 | 3.275 | 3.276 | 3.277 | 3.278 | 3.279 | 3.280 | 3.281 | 3.282 | 3.283 | 3.284 | 3.285 | 3.286 | 3.287 | 3.288 | 3.289 | 3.290 | 3.291 | 3.292 | 3.293 | 3.294 | 3.295 | 3.296 | 3.297 | 3.298 | 3.299 | 3.300 | 3.301 | 3.302 | 3.303 | 3.304 | 3.305 | 3.306 | 3.307 | 3.308 | 3.309 | 3.310 | 3.311 | 3.312 | 3.313 | 3.314 | 3.315 | 3.316 | 3.317 | 3.318 | 3.319 | 3.320 | 3.321 | 3.322 | 3.323 | 3.324 | 3.325 | 3.326 | 3.327 | 3.328 | 3.329 | 3.330 | 3.331 | 3.332 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-11-16 | 2022-11-23 | 2022-11-30 | 2022-12-07 | 2022-12-14 | 2022-12-21 | 2022-12-28 | 2023-01-04 | 2023-01-11 | 2023-01-18 | 2023-01-25 | 2023-02-01 | 2023-02-08 | 2023-02-15 | 2023-02-22 | 2023-03-01 | 2023-03-08 | 2023-03-15 | 2023-03-22 | 2023-03-29 | 2023-04-05 | 2023-04-12 | 2023-04-19 | 2023-04-26 | 2023-05-03 | 2023-05-10 | 2023-05-17 | 2023-05-24 | 2023-05-31 | 2023-06-07 | 2023-06-14 | 2023-06-21 | 2023-06-28 | 2023-07-05 | 2023-07-12 | 2023-07-19 | 2023-07-26 | 2023-08-02 | 2023-08-09 | 2023-08-16 | 2023-08-23 | 2023-08-30 | 2023-09-06 | 2023-09-13 | 2023-09-20 | 2023-09-27 | 2023-10-04 | 2023-10-11 | 2023-10-18 | 2023-10-25 | 2023-11-01 | 2023-11-08 | 2023-11-15 | 2023-11-24 | 2023-11-29 | 2023-12-06 | 2023-12-13 | 2023-12-20 | 2023-12-27 | 2024-01-03 | 2024-01-10 | 2024-01-17 | 2024-01-24 | 2024-01-31 | 2024-02-07 | 2024-02-14 | 2024-02-21 | 2024-02-28 | 2024-03-06 | 2024-03-13 | 2024-03-20 | 2024-03-27 | 2024-04-03 | 2024-04-10 | 2024-04-17 | 2024-04-24 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_92888.1 | NR_4.0_15875.1 | 3.257 | (3) 7Y9Y|1|R+7Y9Y|1|D, 7Y9X|1|R, 7WAH|1|R+7WAH|1|D | (2) 8EEY|1|C+8EEY|1|D, 8EEX|1|C | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7WAH|1|R+7WAH|1|D | Structure of Cas7-11 in complex with guide RNA and target RNA | ELECTRON MICROSCOPY | 2.45 | 39 |
| 2 | 8EEY|1|C+8EEY|1|D | Cas7-11 in complex with DR-mismatched target RNA, Csx29 and Csx30 | ELECTRON MICROSCOPY | 2.53 | 38 |
| 3 | 7Y9Y|1|R+7Y9Y|1|D | Structure of the Cas7-11-Csx29-guide RNA-target RNA (no PFS) complex | ELECTRON MICROSCOPY | 2.77 | 38 |
| 4 | 7Y9X|1|R | Structure of the Cas7-11-Csx29-guide RNA complex | ELECTRON MICROSCOPY | 2.49 | 38 |
| 5 | 8EEX|1|C | Cas7-11 in complex with Csx29 | ELECTRON MICROSCOPY | 2.95 | 36 |
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