Equivalence class NR_4.0_92888.1 Current
| # | IFE | Standardized name | Molecule | Organism | Domain | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7Y9X|1|R (rep) | crRNA | Desulfonema ishimotonii | Bacteria | Structure of the Cas7-11-Csx29-guide RNA complex | Electron microscopy | 2.49 | 2022-11-09 | ||
| 2 | 8EEY|1|C+ 8EEY|1|D | crRNA, DR-mismatched target RNA | Desulfonema ishimotonii | Bacteria + Synthetic | Cas7-11 in complex with DR-mismatched target RNA, Csx29 and Csx30 | Electron microscopy | 2.53 | 2022-11-16 | ||
| 3 | 7WAH|1|R+ 7WAH|1|D | crRNA (39-MER), tgRNA (5'-R(P*UP*AP*CP*CP*CP*AP*UP*GP*UP*CP*GP*AP*AP*GP*AP*CP*AP*AP*CP*AP*AP*AP*G)-3') | Escherichia coli | Bacteria | Structure of Cas7-11 in complex with guide RNA and target RNA | Electron microscopy | 2.45 | 2022-06-15 | ||
| 4 | 7Y9Y|1|R+ 7Y9Y|1|D | RNA (38-MER), RNA (27-MER) | Desulfonema ishimotonii | Bacteria | Structure of the Cas7-11-Csx29-guide RNA-target RNA (no PFS) complex | Electron microscopy | 2.77 | 2022-11-09 | ||
| 5 | 8EEX|1|C | crRNA | Desulfonema ishimotonii | Bacteria | Cas7-11 in complex with Csx29 | Electron microscopy | 2.95 | 2022-11-16 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_92888.1 | NR_4.0_15875.1 | 3.257 | (3) 7Y9Y|1|R+7Y9Y|1|D, 7Y9X|1|R, 7WAH|1|R+7WAH|1|D | (2) 8EEY|1|C+8EEY|1|D, 8EEX|1|C | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7WAH|1|R+7WAH|1|D | Structure of Cas7-11 in complex with guide RNA and target RNA | ELECTRON MICROSCOPY | 2.45 | 39 |
| 2 | 8EEY|1|C+8EEY|1|D | Cas7-11 in complex with DR-mismatched target RNA, Csx29 and Csx30 | ELECTRON MICROSCOPY | 2.53 | 38 |
| 3 | 7Y9Y|1|R+7Y9Y|1|D | Structure of the Cas7-11-Csx29-guide RNA-target RNA (no PFS) complex | ELECTRON MICROSCOPY | 2.77 | 38 |
| 4 | 7Y9X|1|R | Structure of the Cas7-11-Csx29-guide RNA complex | ELECTRON MICROSCOPY | 2.49 | 38 |
| 5 | 8EEX|1|C | Cas7-11 in complex with Csx29 | ELECTRON MICROSCOPY | 2.95 | 36 |