Equivalence class NR_4.0_93339.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6UU0|1|333 (rep) | RNA 3-mer (de novo synthesized) | synthetic construct | E. coli sigma-S transcription initiation complex with a 3-nt RNA and a mismatching GTP ('Fresh' crystal soaked with GTP for 1 hour) | X-ray diffraction | 3.9 | 2020-08-26 | |||
| 2 | 6XL9|1|R | RNA (5'-D(*(GTP))-R(P*AP*G)-3') | Escherichia coli O157:H7 | Cryo-EM structure of EcmrR-RNAP-promoter initial transcribing complex with 3-nt RNA transcript (EcmrR-RPitc-3nt) | Electron microscopy | 2.5 | 2021-04-07 | |||
| 3 | 6B6H|1|3 | NASCENT RNA 3-MER | Escherichia coli | The cryo-EM structure of a bacterial class I transcription activation complex | Electron microscopy | 3.9 | 2017-11-15 |
Release history
| Release | 3.173 |
|---|---|
| Date | 2021-04-07 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_93339.2 | NR_4.0_93339.1 | 3.173 | (2) 6UU0|1|333, 6B6H|1|3 | (1) 6XL9|1|R | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_93339.2 | NR_4.0_93339.3 | 3.174 | (3) 6B6H|1|3, 6UU0|1|333, 6XL9|1|R | (0) | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|