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Equivalence class NR_4.0_93855.11 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17QI4|1|AA (rep)Small subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome at 2.2 A resolutionElectron microscopy2.212022-07-13
27P2E|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycinElectron microscopy2.42022-07-27
36ZM6|1|AASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNAElectron microscopy2.592021-01-13
47PNX|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation aElectron microscopy2.762022-06-15
56ZM5|1|AASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptideElectron microscopy2.892021-01-13
66VMI|1|AASmall subunit ribosomal RNA12s rRNAHomo sapiensMitochondriaRF00177Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)Electron microscopy2.962020-08-05
77PO3|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome small subunitElectron microscopy2.922022-06-15
87PO1|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Initiation complex of human mitochondrial ribosome small subunit with IF3Electron microscopy2.922022-06-15
97PO0|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and IF3Electron microscopy2.92022-06-15
106VLZ|1|AASmall subunit ribosomal RNA12s rRNAHomo sapiensMitochondriaRF00177Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)Electron microscopy2.972020-08-05
116RW4|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF3Electron microscopy2.972020-06-03
127PO2|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Initiation complex of human mitochondrial ribosome small subunit with IF2, fMet-tRNAMet and mRNAElectron microscopy3.092022-06-15
137PNY|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation bElectron microscopy3.062022-06-15
147PNZ|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation cElectron microscopy3.092022-06-15
156RW5|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF2 and IF3Electron microscopy3.142020-06-03
167L08|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.Electron microscopy3.492021-05-12
177A5I|1|A6Small subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Structure of the human mitoribosome with A- P-and E-site mt-tRNAsElectron microscopy3.72020-12-23
187A5K|1|A6Small subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Structure of the human mitoribosome in the post translocation state bound to mtEF-G1Electron microscopy3.72020-12-23
196ZSC|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with E-site tRNAElectron microscopy3.52020-09-16
206ZSD|1|AASmall subunit ribosomal RNA12SrRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNAElectron microscopy3.72020-09-16
213J9M|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Structure of the human mitochondrial ribosome (class 1)Electron microscopy3.52015-04-15
227OG4|1|AASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with P/E-tRNAElectron microscopy3.82021-06-23
236ZSA|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNAElectron microscopy42020-10-21
246ZSG|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNAElectron microscopy42020-10-14
256ZS9|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with ribosome recycling factorElectron microscopy42020-10-14
266NU2|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Structural insights into unique features of the human mitochondrial ribosome recyclingElectron microscopy3.92019-04-17

Release history

Release3.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.260
Date2022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-07

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_93855.11NR_4.0_93855.103.241(25) 7QI4|1|AA, 7PO3|1|A, 7PO2|1|A, 7PO1|1|A, 7PO0|1|A, 7PNZ|1|A, 7PNY|1|A, 7PNX|1|A, 7OG4|1|AA, 7L08|1|AA, 7A5K|1|A6, 7A5I|1|A6, 6ZSG|1|AA, 6ZSD|1|AA, 6ZSC|1|AA, 6ZSA|1|AA, 6ZS9|1|AA, 6ZM6|1|AA, 6ZM5|1|AA, 6VMI|1|AA, 6VLZ|1|AA, 6RW5|1|A, 6RW4|1|A, 6NU2|1|AA, 3J9M|1|AA(1) 7P2E|1|A(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_93855.11NR_4.0_93855.123.261(26) 7L08|1|AA, 6RW4|1|A, 7PNX|1|A, 6VLZ|1|AA, 7PNZ|1|A, 6ZM6|1|AA, 7PO2|1|A, 6ZSC|1|AA, 6ZSG|1|AA, 6NU2|1|AA, 7P2E|1|A, 6ZSA|1|AA, 7QI4|1|AA, 6ZM5|1|AA, 7PO1|1|A, 7A5K|1|A6, 6RW5|1|A, 7PNY|1|A, 6ZSD|1|AA, 3J9M|1|AA, 7OG4|1|AA, 6ZS9|1|AA, 7PO3|1|A, 6VMI|1|AA, 7PO0|1|A, 7A5I|1|A6(0) (6) 8CSR|1|A, 8CSP|1|A, 8CST|1|A, 8CSU|1|A, 8CSS|1|A, 8CSQ|1|A

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16NU2|1|AAStructural insights into unique features of the human mitochondrial ribosome recyclingELECTRON MICROSCOPY3.9923
26VLZ|1|AAStructure of the human mitochondrial ribosome-EF-G1 complex (ClassI)ELECTRON MICROSCOPY2.97944
36VMI|1|AAStructure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)ELECTRON MICROSCOPY2.96944
47L08|1|AACryo-EM structure of the human 55S mitoribosome-RRFmt complex.ELECTRON MICROSCOPY3.49944
53J9M|1|AAStructure of the human mitochondrial ribosome (class 1)ELECTRON MICROSCOPY3.5923
67A5I|1|A6Structure of the human mitoribosome with A- P-and E-site mt-tRNAsELECTRON MICROSCOPY3.7928
77A5K|1|A6Structure of the human mitoribosome in the post translocation state bound to mtEF-G1ELECTRON MICROSCOPY3.7928
86ZS9|1|AAHuman mitochondrial ribosome in complex with ribosome recycling factorELECTRON MICROSCOPY4927
97OG4|1|AAHuman mitochondrial ribosome in complex with P/E-tRNAELECTRON MICROSCOPY3.8924
106ZSC|1|AAHuman mitochondrial ribosome in complex with E-site tRNAELECTRON MICROSCOPY3.5927
116ZSD|1|AAHuman mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNAELECTRON MICROSCOPY3.7927
126ZSA|1|AAHuman mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNAELECTRON MICROSCOPY4927
136ZSG|1|AAHuman mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNAELECTRON MICROSCOPY4927
147QI4|1|AAHuman mitochondrial ribosome at 2.2 A resolutionELECTRON MICROSCOPY2.21949
156ZM6|1|AAHuman mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNAELECTRON MICROSCOPY2.59954
166ZM5|1|AAHuman mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptideELECTRON MICROSCOPY2.89954
177PO2|1|AInitiation complex of human mitochondrial ribosome small subunit with IF2, fMet-tRNAMet and mRNAELECTRON MICROSCOPY3.09950
187PO3|1|AHuman mitochondrial ribosome small subunitELECTRON MICROSCOPY2.92950
197PO1|1|AInitiation complex of human mitochondrial ribosome small subunit with IF3ELECTRON MICROSCOPY2.92950
206RW5|1|AStructure of human mitochondrial 28S ribosome in complex with mitochondrial IF2 and IF3ELECTRON MICROSCOPY3.14950
216RW4|1|AStructure of human mitochondrial 28S ribosome in complex with mitochondrial IF3ELECTRON MICROSCOPY2.97950
227P2E|1|AHuman mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycinELECTRON MICROSCOPY2.4959
237PNZ|1|AAssembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation cELECTRON MICROSCOPY3.09946
247PO0|1|AAssembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and IF3ELECTRON MICROSCOPY2.9946
257PNX|1|AAssembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation aELECTRON MICROSCOPY2.76946
267PNY|1|AAssembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation bELECTRON MICROSCOPY3.06946
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