RNA 3D Hub //

Equivalence class NR_4.0_93855.7 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16ZM6|1|AA (rep)Small subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNAElectron microscopy2.592021-01-13
26ZM5|1|AASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptideElectron microscopy2.892021-01-13
36VMI|1|AASmall subunit ribosomal RNA12s rRNAHomo sapiensMitochondriaRF00177Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)Electron microscopy2.962020-08-05
46VLZ|1|AASmall subunit ribosomal RNA12s rRNAHomo sapiensMitochondriaRF00177Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)Electron microscopy2.972020-08-05
56RW4|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF3Electron microscopy2.972020-06-03
66RW5|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF2 and IF3Electron microscopy3.142020-06-03
77L08|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Cryo-EM structure of the human 55S mitoribosome-RRFmt complex.Electron microscopy3.492021-05-12
87A5I|1|A6Small subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Structure of the human mitoribosome with A- P-and E-site mt-tRNAsElectron microscopy3.72020-12-23
97A5K|1|A6Small subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Structure of the human mitoribosome in the post translocation state bound to mtEF-G1Electron microscopy3.72020-12-23
106ZSC|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with E-site tRNAElectron microscopy3.52020-09-16
116ZSD|1|AASmall subunit ribosomal RNA12SrRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNAElectron microscopy3.72020-09-16
123J9M|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Structure of the human mitochondrial ribosome (class 1)Electron microscopy3.52015-04-15
136ZSA|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNAElectron microscopy42020-10-21
146ZSG|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNAElectron microscopy42020-10-14
156ZS9|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with ribosome recycling factorElectron microscopy42020-10-14
166NU2|1|AASmall subunit ribosomal RNA12S rRNAHomo sapiensMitochondriaRF00177Structural insights into unique features of the human mitochondrial ribosome recyclingElectron microscopy3.92019-04-17

Release history

Release3.1783.1793.1803.1813.1823.183
Date2021-05-122021-05-192021-05-262021-06-022021-06-092021-06-16

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_93855.7NR_4.0_93855.63.178(15) 6NU2|1|AA, 6ZSC|1|AA, 6VMI|1|AA, 7A5K|1|A6, 3J9M|1|AA, 6ZSA|1|AA, 6VLZ|1|AA, 7A5I|1|A6, 6ZS9|1|AA, 6RW5|1|A, 6ZSG|1|AA, 6ZM6|1|AA, 6RW4|1|A, 6ZSD|1|AA, 6ZM5|1|AA(1) 7L08|1|AA(1) 6ZSF|1|AA

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_93855.7NR_4.0_93855.83.184(16) 6ZM6|1|AA, 6ZM5|1|AA, 6VMI|1|AA, 6VLZ|1|AA, 6RW5|1|A, 6RW4|1|A, 6NU2|1|AA, 3J9M|1|AA, 7L08|1|AA, 7A5K|1|A6, 7A5I|1|A6, 6ZSG|1|AA, 6ZSD|1|AA, 6ZSC|1|AA, 6ZSA|1|AA, 6ZS9|1|AA(0) (1) 7OG4|1|AA

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16NU2|1|AAStructural insights into unique features of the human mitochondrial ribosome recyclingELECTRON MICROSCOPY3.9923
27A5K|1|A6Structure of the human mitoribosome in the post translocation state bound to mtEF-G1ELECTRON MICROSCOPY3.7928
37A5I|1|A6Structure of the human mitoribosome with A- P-and E-site mt-tRNAsELECTRON MICROSCOPY3.7928
43J9M|1|AAStructure of the human mitochondrial ribosome (class 1)ELECTRON MICROSCOPY3.5923
56ZS9|1|AAHuman mitochondrial ribosome in complex with ribosome recycling factorELECTRON MICROSCOPY4927
66ZSC|1|AAHuman mitochondrial ribosome in complex with E-site tRNAELECTRON MICROSCOPY3.5927
76ZSD|1|AAHuman mitochondrial ribosome in complex with mRNA, P-site tRNA and E-site tRNAELECTRON MICROSCOPY3.7927
86ZSA|1|AAHuman mitochondrial ribosome bound to mRNA, A-site tRNA and P-site tRNAELECTRON MICROSCOPY4927
96ZSG|1|AAHuman mitochondrial ribosome in complex with mRNA, A-site tRNA, P-site tRNA and E-site tRNAELECTRON MICROSCOPY4927
106ZM6|1|AAHuman mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNAELECTRON MICROSCOPY2.59954
116ZM5|1|AAHuman mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptideELECTRON MICROSCOPY2.89954
126RW5|1|AStructure of human mitochondrial 28S ribosome in complex with mitochondrial IF2 and IF3ELECTRON MICROSCOPY3.14950
136RW4|1|AStructure of human mitochondrial 28S ribosome in complex with mitochondrial IF3ELECTRON MICROSCOPY2.97950
147L08|1|AACryo-EM structure of the human 55S mitoribosome-RRFmt complex.ELECTRON MICROSCOPY3.49944
156VMI|1|AAStructure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)ELECTRON MICROSCOPY2.96944
166VLZ|1|AAStructure of the human mitochondrial ribosome-EF-G1 complex (ClassI)ELECTRON MICROSCOPY2.97944
Copyright 2024 BGSU RNA group. Page generated in 0.2276 s