BGSU RNA Site //

Equivalence class NR_4.0_94066.4 Obsolete

#IFEStandardized nameMoleculeOrganismDomainRfamTitleMethodÅDate
16HA1|1|a (rep)Small subunit ribosomal RNA16S ribosomal RNABacillus subtilisBacteriaRF00177Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycinELECTRON MICROSCOPY3.12018-08-29
27O5B|1|ASmall subunit ribosomal RNA16S rRNA (1533-MER)Bacillus subtilis subsp. subtilis str. 168BacteriaRF00177Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP boundELECTRON MICROSCOPY3.332022-02-02
37QV2|1|aSmall subunit ribosomal RNA16S ribosomal RNA, mRNABacillus subtilis subsp. subtilis str. 168BacteriaRF00177Bacillus subtilis collided disome (Collided 70S)ELECTRON MICROSCOPY3.52022-03-09
46HA8|1|aSmall subunit ribosomal RNA16S rRNABacillus subtilisBacteriaRF00177Cryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosomeELECTRON MICROSCOPY3.52018-08-29
57QV1|1|aSmall subunit ribosomal RNA16S ribosomal RNABacillus subtilis subsp. subtilis str. 168BacteriaRF00177Bacillus subtilis collided disome (Leading 70S)ELECTRON MICROSCOPY3.52022-03-09
65NJT|1|ASmall subunit ribosomal RNA16S ribosomal RNABacillus subtilisBacteriaRF00177Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.ELECTRON MICROSCOPY3.82017-06-14
73J9W|1|AASmall subunit ribosomal RNA16S ribosomal RNA, mRNABacillus subtilisBacteriaRF00177Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complexELECTRON MICROSCOPY3.92015-04-29

Release history

Release3.221
Date2022-03-09

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_94066.4NR_4.0_94066.33.221(5) 7O5B|1|A, 6HA8|1|a, 6HA1|1|a, 5NJT|1|A, 3J9W|1|AA(2) 7QV2|1|a, 7QV1|1|a(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_94066.4NR_4.0_94066.53.222(7) 3J9W|1|AA, 5NJT|1|A, 6HA1|1|a, 6HA8|1|a, 7O5B|1|A, 7QV1|1|a, 7QV2|1|a(0) (0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15NJT|1|AStructure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.ELECTRON MICROSCOPY3.81544
23J9W|1|AACryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complexELECTRON MICROSCOPY3.91544
36HA1|1|aCryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycinELECTRON MICROSCOPY3.11533
46HA8|1|aCryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosomeELECTRON MICROSCOPY3.51533
57QV2|1|aBacillus subtilis collided disome (Collided 70S)ELECTRON MICROSCOPY3.51545
67QV1|1|aBacillus subtilis collided disome (Leading 70S)ELECTRON MICROSCOPY3.51533
77O5B|1|ACryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP boundELECTRON MICROSCOPY3.331533