Equivalence class NR_4.0_94467.5 Obsolete
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 6VQV|1|L (rep) | CrRNA (60-MER) | Pseudomonas aeruginosa | Type I-F CRISPR-Csy complex with its inhibitor AcrF9 | Electron microscopy | 2.57 | 2020-03-11 | |||
2 | 7JZZ|1|M | RNA (61-MER) | Pseudomonas aeruginosa | CryoEM structure of a CRISPR-Cas complex | Electron microscopy | 3.2 | 2020-12-30 | |||
3 | 6B46|1|M | Pseudomonas aeruginosa strain SMC4485 CRISPR repeat sequence | Pseudomonas aeruginosa | Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound anti-CRISPR protein AcrF1 | Electron microscopy | 3.1 | 2017-10-18 | |||
4 | 7JZW|1|M | CRISPR repeat sequence | Pseudomonas aeruginosa | CryoEM structure of a CRISPR-Cas complex | Electron microscopy | 3.2 | 2020-12-30 | |||
5 | 6VQX|1|K | CrRNA (60-MER) | Pseudomonas aeruginosa | Type I-F CRISPR-Csy complex with its inhibitor AcrF6 | Electron microscopy | 3.15 | 2020-03-11 | |||
6 | 6B47|1|M | Pseudomonas aeruginosa strain SMC4485 CRISPR repeat sequence | Pseudomonas aeruginosa | Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound anti-CRISPR protein AcrF2 | Electron microscopy | 3.2 | 2017-10-18 | |||
7 | 7JZX|1|M | RNA (61-MER) | Pseudomonas aeruginosa | CryoEM structure of a CRISPR-Cas complex | Electron microscopy | 3.4 | 2020-12-30 | |||
8 | 5UZ9|2|M | CRISPR RNA (60-MER) | Pseudomonas aeruginosa | Cryo EM structure of anti-CRISPRs, AcrF1 and AcrF2, bound to type I-F crRNA-guided CRISPR surveillance complex | Electron microscopy | 3.4 | 2017-04-26 | |||
9 | 6B45|1|M | Pseudomonas aeruginosa strain SMC4485 CRISPR repeat sequence | Pseudomonas aeruginosa | Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex | Electron microscopy | 3.5 | 2017-10-18 | |||
10 | 7JZY|1|M | RNA (61-MER) | Pseudomonas aeruginosa | CryoEM structure of a CRISPR-Cas complex | Electron microscopy | 3.6 | 2021-09-22 | |||
11 | 6B48|1|M | Pseudomonas aeruginosa strain SMC4485 CRISPR repeat sequence | Pseudomonas aeruginosa | Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound anti-CRISPR protein AcrF10 | Electron microscopy | 3.6 | 2017-10-18 | |||
12 | 7ECV|1|M | RNA (60-MER) | Pseudomonas aeruginosa | The Csy-AcrIF14 complex | Electron microscopy | 3.43 | 2021-11-17 | |||
13 | 7ECW|1|M | RNA (60-MER) | Pseudomonas aeruginosa | The Csy-AcrIF14-dsDNA complex | Electron microscopy | 3.1 | 2021-11-17 | |||
14 | 6W1X|1|M | RNA (60-MER) | Pseudomonas aeruginosa | Cryo-EM structure of anti-CRISPR AcrIF9, bound to the type I-F crRNA-guided CRISPR surveillance complex | Electron microscopy | 3.9 | 2020-05-13 | |||
15 | 6VQW|1|K | CrRNA (40-MER) | Pseudomonas aeruginosa | Type I-F CRISPR-Csy complex with its inhibitor AcrF8 | Electron microscopy | 3.42 | 2020-03-11 |
Release history
Release | 3.205 | 3.206 | 3.207 | 3.208 | 3.209 | 3.210 | 3.211 | 3.212 | 3.213 | 3.214 | 3.215 | 3.216 | 3.217 | 3.218 | 3.219 | 3.220 | 3.221 | 3.222 | 3.223 | 3.224 | 3.225 | 3.226 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2021-11-17 | 2021-11-24 | 2021-12-01 | 2021-12-08 | 2021-12-15 | 2021-12-22 | 2021-12-29 | 2022-01-05 | 2022-01-12 | 2022-01-19 | 2022-01-26 | 2022-02-02 | 2022-02-09 | 2022-02-16 | 2022-02-23 | 2022-03-02 | 2022-03-09 | 2022-03-16 | 2022-03-23 | 2022-03-30 | 2022-04-06 | 2022-04-13 |
Parents
Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
---|---|---|---|---|---|
NR_4.0_94467.5 | NR_4.0_94467.6 | 3.227 | (15) 7ECV|1|M, 7JZX|1|M, 6B45|1|M, 6B48|1|M, 6VQX|1|K, 7JZZ|1|M, 6VQW|1|K, 7JZW|1|M, 6B47|1|M, 6W1X|1|M, 5UZ9|2|M, 7JZY|1|M, 6VQV|1|L, 7ECW|1|M, 6B46|1|M | (0) | (6) 7WE6|1|J, 7ELN|1|J, 7ELM|1|J, 7ELN|1|T, 7ELM|1|T, 7WE6|1|T |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length |
---|---|---|---|---|---|
1 | 6VQV|1|L | Type I-F CRISPR-Csy complex with its inhibitor AcrF9 | ELECTRON MICROSCOPY | 2.57 | 60 |
2 | 6VQW|1|K | Type I-F CRISPR-Csy complex with its inhibitor AcrF8 | ELECTRON MICROSCOPY | 3.42 | 40 |
3 | 6B47|1|M | Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound anti-CRISPR protein AcrF2 | ELECTRON MICROSCOPY | 3.2 | 60 |
4 | 6VQX|1|K | Type I-F CRISPR-Csy complex with its inhibitor AcrF6 | ELECTRON MICROSCOPY | 3.15 | 60 |
5 | 7ECV|1|M | The Csy-AcrIF14 complex | ELECTRON MICROSCOPY | 3.43 | 60 |
6 | 7ECW|1|M | The Csy-AcrIF14-dsDNA complex | ELECTRON MICROSCOPY | 3.1 | 44 |
7 | 6B45|1|M | Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex | ELECTRON MICROSCOPY | 3.5 | 60 |
8 | 5UZ9|2|M | Cryo EM structure of anti-CRISPRs, AcrF1 and AcrF2, bound to type I-F crRNA-guided CRISPR surveillance complex | ELECTRON MICROSCOPY | 3.4 | 60 |
9 | 6W1X|1|M | Cryo-EM structure of anti-CRISPR AcrIF9, bound to the type I-F crRNA-guided CRISPR surveillance complex | ELECTRON MICROSCOPY | 3.9 | 60 |
10 | 6B46|1|M | Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound anti-CRISPR protein AcrF1 | ELECTRON MICROSCOPY | 3.1 | 60 |
11 | 6B48|1|M | Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound anti-CRISPR protein AcrF10 | ELECTRON MICROSCOPY | 3.6 | 60 |
12 | 7JZX|1|M | CryoEM structure of a CRISPR-Cas complex | ELECTRON MICROSCOPY | 3.4 | 61 |
13 | 7JZW|1|M | CryoEM structure of a CRISPR-Cas complex | ELECTRON MICROSCOPY | 3.2 | 61 |
14 | 7JZZ|1|M | CryoEM structure of a CRISPR-Cas complex | ELECTRON MICROSCOPY | 3.2 | 61 |
15 | 7JZY|1|M | CryoEM structure of a CRISPR-Cas complex | ELECTRON MICROSCOPY | 3.6 | 61 |
Coloring options: