Equivalence class NR_4.0_94467.6 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 6VQV|1|L (rep) | CrRNA (60-MER) | Pseudomonas aeruginosa | Type I-F CRISPR-Csy complex with its inhibitor AcrF9 | Electron microscopy | 2.57 | 2020-03-11 | |||
| 2 | 7ELN|1|J | RNA (60-MER) | Pseudomonas aeruginosa | Structure of Csy-AcrIF24-dsDNA | Electron microscopy | 3 | 2022-04-20 | |||
| 3 | 7ELN|1|T | RNA (60-MER) | Pseudomonas aeruginosa | Structure of Csy-AcrIF24-dsDNA | Electron microscopy | 3 | 2022-04-20 | |||
| 4 | 7ELM|1|T | RNA (60-MER) | Pseudomonas aeruginosa | Structure of Csy-AcrIF24 | Electron microscopy | 2.88 | 2022-04-20 | |||
| 5 | 7JZZ|1|M | RNA (61-MER) | Pseudomonas aeruginosa | CryoEM structure of a CRISPR-Cas complex | Electron microscopy | 3.2 | 2020-12-30 | |||
| 6 | 6B46|1|M | Pseudomonas aeruginosa strain SMC4485 CRISPR repeat sequence | Pseudomonas aeruginosa | Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound anti-CRISPR protein AcrF1 | Electron microscopy | 3.1 | 2017-10-18 | |||
| 7 | 7JZW|1|M | CRISPR repeat sequence | Pseudomonas aeruginosa | CryoEM structure of a CRISPR-Cas complex | Electron microscopy | 3.2 | 2020-12-30 | |||
| 8 | 6VQX|1|K | CrRNA (60-MER) | Pseudomonas aeruginosa | Type I-F CRISPR-Csy complex with its inhibitor AcrF6 | Electron microscopy | 3.15 | 2020-03-11 | |||
| 9 | 7WE6|1|J | RNA (60-MER) | Pseudomonas aeruginosa | Structure of Csy-AcrIF24-dsDNA | Electron microscopy | 3.2 | 2022-04-20 | |||
| 10 | 7WE6|1|T | RNA (60-MER) | Pseudomonas aeruginosa | Structure of Csy-AcrIF24-dsDNA | Electron microscopy | 3.2 | 2022-04-20 | |||
| 11 | 7ELM|1|J | RNA (60-MER) | Pseudomonas aeruginosa | Structure of Csy-AcrIF24 | Electron microscopy | 2.88 | 2022-04-20 | |||
| 12 | 6B47|1|M | Pseudomonas aeruginosa strain SMC4485 CRISPR repeat sequence | Pseudomonas aeruginosa | Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound anti-CRISPR protein AcrF2 | Electron microscopy | 3.2 | 2017-10-18 | |||
| 13 | 7JZX|1|M | RNA (61-MER) | Pseudomonas aeruginosa | CryoEM structure of a CRISPR-Cas complex | Electron microscopy | 3.4 | 2020-12-30 | |||
| 14 | 5UZ9|2|M | CRISPR RNA (60-MER) | Pseudomonas aeruginosa | Cryo EM structure of anti-CRISPRs, AcrF1 and AcrF2, bound to type I-F crRNA-guided CRISPR surveillance complex | Electron microscopy | 3.4 | 2017-04-26 | |||
| 15 | 6B45|1|M | Pseudomonas aeruginosa strain SMC4485 CRISPR repeat sequence | Pseudomonas aeruginosa | Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex | Electron microscopy | 3.5 | 2017-10-18 | |||
| 16 | 7JZY|1|M | RNA (61-MER) | Pseudomonas aeruginosa | CryoEM structure of a CRISPR-Cas complex | Electron microscopy | 3.6 | 2021-09-22 | |||
| 17 | 6B48|1|M | Pseudomonas aeruginosa strain SMC4485 CRISPR repeat sequence | Pseudomonas aeruginosa | Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound anti-CRISPR protein AcrF10 | Electron microscopy | 3.6 | 2017-10-18 | |||
| 18 | 7ECV|1|M | RNA (60-MER) | Pseudomonas aeruginosa | The Csy-AcrIF14 complex | Electron microscopy | 3.43 | 2021-11-17 | |||
| 19 | 7ECW|1|M | RNA (60-MER) | Pseudomonas aeruginosa | The Csy-AcrIF14-dsDNA complex | Electron microscopy | 3.1 | 2021-11-17 | |||
| 20 | 6W1X|1|M | RNA (60-MER) | Pseudomonas aeruginosa | Cryo-EM structure of anti-CRISPR AcrIF9, bound to the type I-F crRNA-guided CRISPR surveillance complex | Electron microscopy | 3.9 | 2020-05-13 | |||
| 21 | 6VQW|1|K | CrRNA (40-MER) | Pseudomonas aeruginosa | Type I-F CRISPR-Csy complex with its inhibitor AcrF8 | Electron microscopy | 3.42 | 2020-03-11 |
Release history
| Release | 3.227 | 3.228 | 3.229 | 3.230 | 3.231 | 3.232 | 3.233 | 3.234 | 3.235 | 3.236 | 3.237 | 3.238 | 3.239 | 3.240 | 3.241 | 3.242 | 3.243 | 3.244 | 3.245 | 3.246 | 3.247 | 3.248 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-04-20 | 2022-04-27 | 2022-05-04 | 2022-05-11 | 2022-05-18 | 2022-05-25 | 2022-06-01 | 2022-06-08 | 2022-06-15 | 2022-06-22 | 2022-06-29 | 2022-07-06 | 2022-07-13 | 2022-07-20 | 2022-07-27 | 2022-08-03 | 2022-08-10 | 2022-08-17 | 2022-08-24 | 2022-08-31 | 2022-09-07 | 2022-09-14 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_94467.6 | NR_4.0_94467.5 | 3.227 | (15) 7JZX|1|M, 6B45|1|M, 6VQW|1|K, 7JZW|1|M, 5UZ9|2|M, 6VQV|1|L, 7ECW|1|M, 6B48|1|M, 7ECV|1|M, 7JZZ|1|M, 6B47|1|M, 6W1X|1|M, 7JZY|1|M, 6B46|1|M, 6VQX|1|K | (6) 7ELM|1|J, 7ELN|1|J, 7WE6|1|J, 7WE6|1|T, 7ELM|1|T, 7ELN|1|T | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_4.0_94467.6 | NR_4.0_94467.7 | 3.249 | (21) 7JZY|1|M, 6B45|1|M, 7WE6|1|T, 6B48|1|M, 6VQX|1|K, 7ELM|1|J, 7ELN|1|T, 7ECW|1|M, 7ELN|1|J, 5UZ9|2|M, 7JZX|1|M, 7WE6|1|J, 6B47|1|M, 6VQW|1|K, 7ECV|1|M, 7ELM|1|T, 7JZW|1|M, 7JZZ|1|M, 6B46|1|M, 6VQV|1|L, 6W1X|1|M | (0) | (5) 7T3L|1|M, 7TAW|1|M, 7TAX|1|M, 7T3J|1|M, 7T3K|1|M |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7ELM|1|J | Structure of Csy-AcrIF24 | ELECTRON MICROSCOPY | 2.88 | 60 |
| 2 | 7ELM|1|T | Structure of Csy-AcrIF24 | ELECTRON MICROSCOPY | 2.88 | 60 |
| 3 | 7JZX|1|M | CryoEM structure of a CRISPR-Cas complex | ELECTRON MICROSCOPY | 3.4 | 61 |
| 4 | 7JZW|1|M | CryoEM structure of a CRISPR-Cas complex | ELECTRON MICROSCOPY | 3.2 | 61 |
| 5 | 7JZZ|1|M | CryoEM structure of a CRISPR-Cas complex | ELECTRON MICROSCOPY | 3.2 | 61 |
| 6 | 7JZY|1|M | CryoEM structure of a CRISPR-Cas complex | ELECTRON MICROSCOPY | 3.6 | 61 |
| 7 | 7ELN|1|T | Structure of Csy-AcrIF24-dsDNA | ELECTRON MICROSCOPY | 3 | 60 |
| 8 | 7ELN|1|J | Structure of Csy-AcrIF24-dsDNA | ELECTRON MICROSCOPY | 3 | 60 |
| 9 | 7WE6|1|J | Structure of Csy-AcrIF24-dsDNA | ELECTRON MICROSCOPY | 3.2 | 60 |
| 10 | 7WE6|1|T | Structure of Csy-AcrIF24-dsDNA | ELECTRON MICROSCOPY | 3.2 | 60 |
| 11 | 6B48|1|M | Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound anti-CRISPR protein AcrF10 | ELECTRON MICROSCOPY | 3.6 | 60 |
| 12 | 6B46|1|M | Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound anti-CRISPR protein AcrF1 | ELECTRON MICROSCOPY | 3.1 | 60 |
| 13 | 6W1X|1|M | Cryo-EM structure of anti-CRISPR AcrIF9, bound to the type I-F crRNA-guided CRISPR surveillance complex | ELECTRON MICROSCOPY | 3.9 | 60 |
| 14 | 5UZ9|2|M | Cryo EM structure of anti-CRISPRs, AcrF1 and AcrF2, bound to type I-F crRNA-guided CRISPR surveillance complex | ELECTRON MICROSCOPY | 3.4 | 60 |
| 15 | 6B45|1|M | Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex | ELECTRON MICROSCOPY | 3.5 | 60 |
| 16 | 7ECW|1|M | The Csy-AcrIF14-dsDNA complex | ELECTRON MICROSCOPY | 3.1 | 44 |
| 17 | 7ECV|1|M | The Csy-AcrIF14 complex | ELECTRON MICROSCOPY | 3.43 | 60 |
| 18 | 6VQX|1|K | Type I-F CRISPR-Csy complex with its inhibitor AcrF6 | ELECTRON MICROSCOPY | 3.15 | 60 |
| 19 | 6B47|1|M | Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound anti-CRISPR protein AcrF2 | ELECTRON MICROSCOPY | 3.2 | 60 |
| 20 | 6VQW|1|K | Type I-F CRISPR-Csy complex with its inhibitor AcrF8 | ELECTRON MICROSCOPY | 3.42 | 40 |
| 21 | 6VQV|1|L | Type I-F CRISPR-Csy complex with its inhibitor AcrF9 | ELECTRON MICROSCOPY | 2.57 | 60 |