Equivalence class NR_4.0_95948.1 Current
| # | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
|---|---|---|---|---|---|---|---|
| 1 | 5VCI|1|A+ 5VCI|1|B (rep) | RNA (5'-R(*CP*UP*GP*CP*UP*GP*GP*CP*UP*AP*AP*GP*GP*CP*CP*CP*GP*AP*AP*AP*GP*G)-3'), RNA (5'-R(P*CP*UP*AP*UP*GP*CP*CP*UP*GP*CP*UP*G)-3') | RNA hairpin structure containing tetraloop/receptor motif, complexed with 2-MeImpG analogue | X-RAY DIFFRACTION | 2.6 | 2018-02-21 | |
| 2 | 5VGW|1|A+ 5VGW|1|B | RNA (5'-R(*CP*UP*GP*CP*UP*GP*GP*CP*UP*AP*AP*GP*GP*CP*CP*CP*GP*AP*AP*AP*GP*G)-3'), RNA (5'-R(P*GP*CP*UP*AP*UP*GP*CP*CP*UP*GP*CP*UP*G)-3') | RNA hairpin structure containing tetraloop/receptor motif | X-RAY DIFFRACTION | 2.42 | 2018-02-21 | |
| 3 | 6U8F|1|A+ 6U8F|1|B | RNA (5'-R(*CP*UP*GP*CP*UP*GP*GP*CP*UP*AP*AP*GP*GP*CP*AP*UP*GP*AP*AP*AP*GP*U)-3'), RNA (5'-R(P*CP*UP*AP*UP*GP*CP*CP*UP*GP*CP*UP*G)-3') | RNA hairpin, bound with TNA monomer | X-RAY DIFFRACTION | 2.81 | 2020-12-09 | |
| 4 | 5VCF|1|A+ 5VCF|1|B | RNA (5'-R(*CP*UP*GP*CP*UP*GP*GP*CP*UP*AP*AP*GP*GP*CP*CP*CP*GP*AP*AP*AP*GP*G)-3'), RNA (5'-R(*CP*UP*AP*UP*GP*CP*CP*UP*GP*CP*UP*G)-3') | RNA hairpin structure containing tetraloop/receptor motif, complexed with 2-MeImpG analogue | X-RAY DIFFRACTION | 2.8 | 2018-02-21 | |
| 5 | 6U7Z|1|A+ 6U7Z|1|B | RNA (5'-R(*CP*UP*GP*CP*UP*GP*GP*CP*UP*AP*AP*GP*GP*GP*CP*CP*GP*AP*AP*AP*GP*(TG))-3'), RNA (5'-R(*CP*UP*AP*UP*GP*CP*CP*UP*GP*CP*UP*G)-3') | RNA hairpin structure containing one TNA nucleotide as primer | X-RAY DIFFRACTION | 2.71 | 2020-12-09 | |
| 6 | 6U7Y|1|A+ 6U7Y|1|B | RNA (5'-R(*CP*UP*GP*CP*UP*GP*GP*CP*UP*AP*AP*GP*GP*(TG)P*CP*CP*GP*AP*AP*AP*GP*G)-3'), RNA (5'-R(*CP*UP*AP*UP*GP*CP*CP*UP*GP*CP*UP*G)-3') | RNA hairpin structure containing one TNA nucleotide as template | X-RAY DIFFRACTION | 2.95 | 2020-12-09 |
Release history
| Release | 3.156 |
|---|---|
| Date | 2020-12-09 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_4.0_95948.1 | NR_4.0_08052.1 | 3.156 | (3) 5VGW|1|A+5VGW|1|B, 5VCI|1|A+5VCI|1|B, 5VCF|1|A+5VCF|1|B | (3) 6U8F|1|A+6U8F|1|B, 6U7Z|1|A+6U7Z|1|B, 6U7Y|1|A+6U7Y|1|B | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6U8F|1|A+6U8F|1|B | RNA hairpin, bound with TNA monomer | X-RAY DIFFRACTION | 2.81 | 22 |
| 2 | 5VGW|1|A+5VGW|1|B | RNA hairpin structure containing tetraloop/receptor motif | X-RAY DIFFRACTION | 2.42 | 22 |
| 3 | 5VCF|1|A+5VCF|1|B | RNA hairpin structure containing tetraloop/receptor motif, complexed with 2-MeImpG analogue | X-RAY DIFFRACTION | 2.8 | 22 |
| 4 | 5VCI|1|A+5VCI|1|B | RNA hairpin structure containing tetraloop/receptor motif, complexed with 2-MeImpG analogue | X-RAY DIFFRACTION | 2.6 | 22 |
| 5 | 6U7Y|1|A+6U7Y|1|B | RNA hairpin structure containing one TNA nucleotide as template | X-RAY DIFFRACTION | 2.95 | 22 |
| 6 | 6U7Z|1|A+6U7Z|1|B | RNA hairpin structure containing one TNA nucleotide as primer | X-RAY DIFFRACTION | 2.71 | 22 |