BGSU RNA Site //

Equivalence class NR_4.0_96169.2 Current

#IFEStandardized nameMoleculeOrganismDomainRfamTitleMethodÅDate
17RYG|1|A (rep)Large subunit ribosomal RNA23S ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF02541A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70SELECTRON MICROSCOPY2.382022-02-02
27RYH|1|ALarge subunit ribosomal RNA23S ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF02541A. baumannii Ribosome-TP-6076 complex: Empty 70SELECTRON MICROSCOPY2.432022-02-02
37M4Y|1|ALarge subunit ribosomal RNA23s ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF02541A. baumannii Ribosome-Eravacycline complex: 70S with E-tRNAELECTRON MICROSCOPY2.52021-05-19
47M4W|1|ALarge subunit ribosomal RNA23s ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF02541A. baumannii Ribosome-Eravacycline complex: 70S EmptyELECTRON MICROSCOPY2.552021-05-19
56YSI|1|1Large subunit ribosomal RNA23S ribosomal RNAAcinetobacter baumanniiBacteriaRF02541Acinetobacter baumannii ribosome-tigecycline complex - 50S subunitELECTRON MICROSCOPY2.52020-09-16
67M4V|1|ALarge subunit ribosomal RNA23s ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF02541A. baumannii Ribosome-Eravacycline complex: 50SELECTRON MICROSCOPY2.542021-05-19
77M4X|1|ALarge subunit ribosomal RNA23s ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF02541A. baumannii Ribosome-Eravacycline complex: 70S with P-tRNAELECTRON MICROSCOPY2.662021-05-19
86V3A|1|AN1Large subunit ribosomal RNA23s ribosomal RNAAcinetobacter baumanniiBacteriaRF02541Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNAELECTRON MICROSCOPY2.822020-02-05
97RYF|1|ALarge subunit ribosomal RNA23S ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF02541A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70SELECTRON MICROSCOPY2.652022-02-02
106YHS|1|1Large subunit ribosomal RNA23S ribosomal RNAAcinetobacter baumanniiBacteriaRF02541Acinetobacter baumannii ribosome-amikacin complex - 50S subunitELECTRON MICROSCOPY2.72020-09-16
116V3B|1|AN1Large subunit ribosomal RNA23s ribosomal RNAAcinetobacter baumanniiBacteriaRF02541Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty stateELECTRON MICROSCOPY2.912020-02-05
126V3D|1|AN1Large subunit ribosomal RNA23s ribosomal RNAAcinetobacter baumanniiBacteriaRF02541Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunitELECTRON MICROSCOPY2.952020-02-05
137M4Z|1|ALarge subunit ribosomal RNA23s ribosomal RNAAcinetobacter baumannii AB0057BacteriaRF02541A. baumannii Ribosome-Eravacycline complex: 70S with hpfELECTRON MICROSCOPY2.922021-05-19
146V39|1|AN1Large subunit ribosomal RNA23s ribosomal RNAAcinetobacter baumanniiBacteriaRF02541Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNAELECTRON MICROSCOPY3.042020-02-05

Release history

Release3.2163.2173.2183.2193.2203.2213.2223.2233.2243.2253.2263.2273.2283.2293.2303.2313.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.274
Date2022-02-022022-02-092022-02-162022-02-232022-03-022022-03-092022-03-162022-03-232022-03-302022-04-062022-04-132022-04-202022-04-272022-05-042022-05-112022-05-182022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-15

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_96169.2NR_4.0_96169.13.216(11) 7M4X|1|A, 7M4W|1|A, 7M4V|1|A, 6YSI|1|1, 6YHS|1|1, 6V3D|1|AN1, 6V3B|1|AN1, 6V3A|1|AN1, 6V39|1|AN1, 7M4Z|1|A, 7M4Y|1|A(3) 7RYH|1|A, 7RYG|1|A, 7RYF|1|A(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16YSI|1|1Acinetobacter baumannii ribosome-tigecycline complex - 50S subunitELECTRON MICROSCOPY2.52672
26YHS|1|1Acinetobacter baumannii ribosome-amikacin complex - 50S subunitELECTRON MICROSCOPY2.72672
37M4Y|1|AA. baumannii Ribosome-Eravacycline complex: 70S with E-tRNAELECTRON MICROSCOPY2.52715
47M4W|1|AA. baumannii Ribosome-Eravacycline complex: 70S EmptyELECTRON MICROSCOPY2.552715
57M4X|1|AA. baumannii Ribosome-Eravacycline complex: 70S with P-tRNAELECTRON MICROSCOPY2.662715
67M4Z|1|AA. baumannii Ribosome-Eravacycline complex: 70S with hpfELECTRON MICROSCOPY2.922715
77M4V|1|AA. baumannii Ribosome-Eravacycline complex: 50SELECTRON MICROSCOPY2.542717
87RYG|1|AA. baumannii Ribosome-TP-6076 complex: E-site tRNA 70SELECTRON MICROSCOPY2.382673
97RYH|1|AA. baumannii Ribosome-TP-6076 complex: Empty 70SELECTRON MICROSCOPY2.432673
107RYF|1|AA. baumannii Ribosome-TP-6076 complex: P-site tRNA 70SELECTRON MICROSCOPY2.652673
116V39|1|AN1Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNAELECTRON MICROSCOPY3.042877
126V3D|1|AN1Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunitELECTRON MICROSCOPY2.952877
136V3B|1|AN1Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty stateELECTRON MICROSCOPY2.912877
146V3A|1|AN1Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNAELECTRON MICROSCOPY2.822877