Equivalence class NR_4.0_96169.2 Current
# | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
---|---|---|---|---|---|---|---|
1 | 7RYG|1|A (rep) | 23S ribosomal RNA | A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S | ELECTRON MICROSCOPY | 2.38 | 2022-02-02 | |
2 | 7RYH|1|A | 23S ribosomal RNA | A. baumannii Ribosome-TP-6076 complex: Empty 70S | ELECTRON MICROSCOPY | 2.43 | 2022-02-02 | |
3 | 7M4Y|1|A | 23s ribosomal RNA | A. baumannii Ribosome-Eravacycline complex: 70S with E-tRNA | ELECTRON MICROSCOPY | 2.5 | 2021-05-19 | |
4 | 7M4W|1|A | 23s ribosomal RNA | A. baumannii Ribosome-Eravacycline complex: 70S Empty | ELECTRON MICROSCOPY | 2.55 | 2021-05-19 | |
5 | 6YSI|1|1 | 23S ribosomal RNA | Acinetobacter baumannii | Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit | ELECTRON MICROSCOPY | 2.5 | 2020-09-16 |
6 | 7M4V|1|A | 23s ribosomal RNA | A. baumannii Ribosome-Eravacycline complex: 50S | ELECTRON MICROSCOPY | 2.54 | 2021-05-19 | |
7 | 7M4X|1|A | 23s ribosomal RNA | A. baumannii Ribosome-Eravacycline complex: 70S with P-tRNA | ELECTRON MICROSCOPY | 2.66 | 2021-05-19 | |
8 | 6V3A|1|AN1 | 23s ribosomal RNA | Acinetobacter baumannii | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA | ELECTRON MICROSCOPY | 2.82 | 2020-02-05 |
9 | 7RYF|1|A | 23S ribosomal RNA | A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S | ELECTRON MICROSCOPY | 2.65 | 2022-02-02 | |
10 | 6YHS|1|1 | 23S ribosomal RNA | Acinetobacter baumannii | Acinetobacter baumannii ribosome-amikacin complex - 50S subunit | ELECTRON MICROSCOPY | 2.7 | 2020-09-16 |
11 | 6V3B|1|AN1 | 23s ribosomal RNA | Acinetobacter baumannii | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state | ELECTRON MICROSCOPY | 2.91 | 2020-02-05 |
12 | 6V3D|1|AN1 | 23s ribosomal RNA | Acinetobacter baumannii | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit | ELECTRON MICROSCOPY | 2.95 | 2020-02-05 |
13 | 7M4Z|1|A | 23s ribosomal RNA | A. baumannii Ribosome-Eravacycline complex: 70S with hpf | ELECTRON MICROSCOPY | 2.92 | 2021-05-19 | |
14 | 6V39|1|AN1 | 23s ribosomal RNA | Acinetobacter baumannii | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA | ELECTRON MICROSCOPY | 3.04 | 2020-02-05 |
Parents
This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
---|---|---|---|---|---|
NR_4.0_96169.2 | NR_4.0_96169.1 | 3.216 | (11) 7M4W|1|A, 7M4V|1|A, 6YSI|1|1, 6YHS|1|1, 6V3D|1|AN1, 6V3B|1|AN1, 6V3A|1|AN1, 6V39|1|AN1, 7M4Z|1|A, 7M4Y|1|A, 7M4X|1|A | (3) 7RYG|1|A, 7RYF|1|A, 7RYH|1|A | (0) |
Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length |
---|---|---|---|---|---|
1 | 6YSI|1|1 | Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit | ELECTRON MICROSCOPY | 2.5 | 2672 |
2 | 6YHS|1|1 | Acinetobacter baumannii ribosome-amikacin complex - 50S subunit | ELECTRON MICROSCOPY | 2.7 | 2672 |
3 | 7M4Y|1|A | A. baumannii Ribosome-Eravacycline complex: 70S with E-tRNA | ELECTRON MICROSCOPY | 2.5 | 2715 |
4 | 7M4W|1|A | A. baumannii Ribosome-Eravacycline complex: 70S Empty | ELECTRON MICROSCOPY | 2.55 | 2715 |
5 | 7M4X|1|A | A. baumannii Ribosome-Eravacycline complex: 70S with P-tRNA | ELECTRON MICROSCOPY | 2.66 | 2715 |
6 | 7M4Z|1|A | A. baumannii Ribosome-Eravacycline complex: 70S with hpf | ELECTRON MICROSCOPY | 2.92 | 2715 |
7 | 7M4V|1|A | A. baumannii Ribosome-Eravacycline complex: 50S | ELECTRON MICROSCOPY | 2.54 | 2717 |
8 | 7RYG|1|A | A. baumannii Ribosome-TP-6076 complex: E-site tRNA 70S | ELECTRON MICROSCOPY | 2.38 | 2673 |
9 | 7RYH|1|A | A. baumannii Ribosome-TP-6076 complex: Empty 70S | ELECTRON MICROSCOPY | 2.43 | 2673 |
10 | 7RYF|1|A | A. baumannii Ribosome-TP-6076 complex: P-site tRNA 70S | ELECTRON MICROSCOPY | 2.65 | 2673 |
11 | 6V39|1|AN1 | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with P-site tRNA | ELECTRON MICROSCOPY | 3.04 | 2877 |
12 | 6V3D|1|AN1 | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit | ELECTRON MICROSCOPY | 2.95 | 2877 |
13 | 6V3B|1|AN1 | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state | ELECTRON MICROSCOPY | 2.91 | 2877 |
14 | 6V3A|1|AN1 | Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNA | ELECTRON MICROSCOPY | 2.82 | 2877 |