BGSU RNA Site //

Equivalence class NR_4.0_96269.8 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodÅDate
16ZP4|1|1 (rep)Transfer RNAtRNAHomo sapiensEukaryaRF00005SARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 2Electron microscopy2.92020-07-29
26QZP|1|S6Transfer RNAE site tRNA (75-MER)Homo sapiensEukaryaRF00005High-resolution cryo-EM structure of the human 80S ribosomeElectron microscopy2.92019-04-24
36EK0|1|S6Human initiator Met-tRNA-iHomo sapiensEukaryaHigh-resolution cryo-EM structure of the human 80S ribosomeElectron microscopy2.92018-01-24
45T2C|1|AnTransfer RNAtRNAHomo sapiensEukaryaRF00005CryoEM structure of the human ribosome at 3.6 Angstrom resolutionElectron microscopy3.62017-01-25
56Y57|1|B4Transfer RNAP/E tRNA, mRNAHomo sapiensEukaryaRF00005Structure of human ribosome in hybrid-PRE stateElectron microscopy3.52020-04-15
64UG0|1|S6Transfer RNAHUMAN INITIATOR MET-TRNA-IHomo sapiensEukaryaRF00005STRUCTURE OF THE HUMAN 80S RIBOSOMEElectron microscopy3.62015-06-10

Release history

Release3.1373.1383.1393.1403.1413.1423.1433.1443.1453.1463.147
Date2020-07-292020-08-052020-08-122020-08-192020-08-262020-09-022020-09-092020-09-162020-09-232020-09-302020-10-07

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_96269.8NR_4.0_96269.73.137(5) 6Y57|1|B4, 6QZP|1|S6, 6EK0|1|S6, 5T2C|1|An, 4UG0|1|S6(1) 6ZP4|1|1(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_96269.8NR_4.0_96269.93.148(6) 6QZP|1|S6, 6EK0|1|S6, 5T2C|1|An, 4UG0|1|S6, 6ZP4|1|1, 6Y57|1|B4(0) (1) 7A09|1|f

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16Y57|1|B4Structure of human ribosome in hybrid-PRE stateELECTRON MICROSCOPY3.575
26EK0|1|S6High-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.975
36QZP|1|S6High-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.975
44UG0|1|S6STRUCTURE OF THE HUMAN 80S RIBOSOMEELECTRON MICROSCOPY3.675
55T2C|1|AnCryoEM structure of the human ribosome at 3.6 Angstrom resolutionELECTRON MICROSCOPY3.675
66ZP4|1|1SARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 2ELECTRON MICROSCOPY2.975
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