Equivalence class NR_4.0_97539.2 Obsolete
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 7KGB|1|a (rep) | Small subunit ribosomal RNA | 16S rRNA | Mycobacterium tuberculosis H37Rv | Bacteria | RF00177 | CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9 | Electron microscopy | 2.7 | 2022-01-19 |
2 | 7MT7|1|a | Small subunit ribosomal RNA | 16S rRNA | Mycobacterium tuberculosis H37Rv | Bacteria | RF00177 | Mtb 70S with P and E site tRNAs | Electron microscopy | 2.71 | 2022-02-02 |
3 | 7MT2|1|a | Small subunit ribosomal RNA | 16S rRNA | Mycobacterium tuberculosis H37Rv | Bacteria | RF00177 | Mtb 70S initiation complex | Electron microscopy | 2.76 | 2022-02-02 |
4 | 8FR8|1|a | Small subunit ribosomal RNA | 16S rRNA (1511-MER) | Mycolicibacterium smegmatis MC2 155 | Bacteria | RF00177 | Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex | Electron microscopy | 2.76 | 2023-05-17 |
5 | 7MSM|1|a | Small subunit ribosomal RNA | 16S rRNA | Mycobacterium tuberculosis H37Rv | Bacteria | RF00177 | Mtb 70SIC in complex with MtbEttA at Trans_R0 state | Electron microscopy | 2.79 | 2022-02-02 |
6 | 7MT3|1|a | Small subunit ribosomal RNA | 16S rRNA | Mycobacterium tuberculosis H37Rv | Bacteria | RF00177 | Mtb 70S with P/E tRNA | Electron microscopy | 2.8 | 2022-02-02 |
7 | 7MSC|1|a | Small subunit ribosomal RNA | 16S rRNA | Mycobacterium tuberculosis H37Rv | Bacteria | RF00177 | Mtb 70SIC in complex with MtbEttA at Pre_R0 state | Electron microscopy | 2.97 | 2022-02-02 |
8 | 7MSZ|1|a | Small subunit ribosomal RNA | 16S rRNA | Mycobacterium tuberculosis H37Rv | Bacteria | RF00177 | Mtb 70SIC in complex with MtbEttA at Trans_R1 state | Electron microscopy | 3.1 | 2022-02-02 |
9 | 7MSH|1|a | Small subunit ribosomal RNA | 16S rRNA | Mycobacterium tuberculosis H37Rv | Bacteria | RF00177 | Mtb 70SIC in complex with MtbEttA at Pre_R1 state | Electron microscopy | 3.23 | 2022-02-02 |
10 | 5ZEB|1|a | Small subunit ribosomal RNA | 16S rRNA | Mycolicibacterium smegmatis | Bacteria | RF00177 | M. Smegmatis P/P state 70S ribosome structure | Electron microscopy | 3.4 | 2018-09-26 |
11 | 5ZEP|1|a | Small subunit ribosomal RNA | 16S rRNA | Mycolicibacterium smegmatis | Bacteria | RF00177 | M. smegmatis hibernating state 70S ribosome structure | Electron microscopy | 3.4 | 2018-09-26 |
12 | 6DZI|1|h | Small subunit ribosomal RNA | 16S rRNA | Mycolicibacterium smegmatis | Bacteria | RF00177 | Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex | Electron microscopy | 3.46 | 2018-09-26 |
13 | 5O5J|1|A | Small subunit ribosomal RNA | 16S rRNA | Mycolicibacterium smegmatis | Bacteria | RF00177 | Structure of the 30S small ribosomal subunit from Mycobacterium smegmatis | Electron microscopy | 3.45 | 2017-07-12 |
14 | 5ZEU|1|a | Small subunit ribosomal RNA | 16S rRNA | Mycolicibacterium smegmatis | Bacteria | RF00177 | M. smegmatis P/P state 30S ribosomal subunit | Electron microscopy | 3.7 | 2018-09-26 |
15 | 6DZK|1|A | Small subunit ribosomal RNA | 16S rRNA | Mycolicibacterium smegmatis | Bacteria | RF00177 | Cryo-EM Structure of Mycobacterium smegmatis C(minus) 30S ribosomal subunit with MPY | Electron microscopy | 3.6 | 2018-09-19 |
16 | 5XYU|1|A | Small subunit ribosomal RNA | 16S RNA | Mycolicibacterium smegmatis | Bacteria | RF00177 | Small subunit of Mycobacterium smegmatis ribosome | Electron microscopy | 3.45 | 2017-09-27 |
Release history
Release | 3.283 | 3.284 | 3.285 | 3.286 | 3.287 | 3.288 | 3.289 | 3.290 | 3.291 | 3.292 | 3.293 | 3.294 | 3.295 | 3.296 | 3.297 | 3.298 | 3.299 | 3.300 | 3.301 | 3.302 | 3.303 | 3.304 | 3.305 | 3.306 | 3.307 | 3.308 | 3.309 | 3.310 | 3.311 | 3.312 | 3.313 | 3.314 | 3.315 | 3.316 | 3.317 | 3.318 | 3.319 | 3.320 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2023-05-17 | 2023-05-24 | 2023-05-31 | 2023-06-07 | 2023-06-14 | 2023-06-21 | 2023-06-28 | 2023-07-05 | 2023-07-12 | 2023-07-19 | 2023-07-26 | 2023-08-02 | 2023-08-09 | 2023-08-16 | 2023-08-23 | 2023-08-30 | 2023-09-06 | 2023-09-13 | 2023-09-20 | 2023-09-27 | 2023-10-04 | 2023-10-11 | 2023-10-18 | 2023-10-25 | 2023-11-01 | 2023-11-08 | 2023-11-15 | 2023-11-24 | 2023-11-29 | 2023-12-06 | 2023-12-13 | 2023-12-20 | 2023-12-27 | 2024-01-03 | 2024-01-10 | 2024-01-17 | 2024-01-24 | 2024-01-31 |
Parents
Children
This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).#S | PDB | Title | Method | Resolution | Length |
---|---|---|---|---|---|
1 | 8FR8|1|a | Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex | ELECTRON MICROSCOPY | 2.76 | 1511 |
2 | 5O5J|1|A | Structure of the 30S small ribosomal subunit from Mycobacterium smegmatis | ELECTRON MICROSCOPY | 3.45 | 1511 |
3 | 5ZEP|1|a | M. smegmatis hibernating state 70S ribosome structure | ELECTRON MICROSCOPY | 3.4 | 1506 |
4 | 5ZEU|1|a | M. smegmatis P/P state 30S ribosomal subunit | ELECTRON MICROSCOPY | 3.7 | 1506 |
5 | 5ZEB|1|a | M. Smegmatis P/P state 70S ribosome structure | ELECTRON MICROSCOPY | 3.4 | 1506 |
6 | 6DZK|1|A | Cryo-EM Structure of Mycobacterium smegmatis C(minus) 30S ribosomal subunit with MPY | ELECTRON MICROSCOPY | 3.6 | 1511 |
7 | 6DZI|1|h | Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex | ELECTRON MICROSCOPY | 3.46 | 1511 |
8 | 5XYU|1|A | Small subunit of Mycobacterium smegmatis ribosome | ELECTRON MICROSCOPY | 3.45 | 1379 |
9 | 7MSZ|1|a | Mtb 70SIC in complex with MtbEttA at Trans_R1 state | ELECTRON MICROSCOPY | 3.1 | 1512 |
10 | 7MSH|1|a | Mtb 70SIC in complex with MtbEttA at Pre_R1 state | ELECTRON MICROSCOPY | 3.23 | 1512 |
11 | 7MT3|1|a | Mtb 70S with P/E tRNA | ELECTRON MICROSCOPY | 2.8 | 1512 |
12 | 7MSM|1|a | Mtb 70SIC in complex with MtbEttA at Trans_R0 state | ELECTRON MICROSCOPY | 2.79 | 1512 |
13 | 7MSC|1|a | Mtb 70SIC in complex with MtbEttA at Pre_R0 state | ELECTRON MICROSCOPY | 2.97 | 1512 |
14 | 7MT2|1|a | Mtb 70S initiation complex | ELECTRON MICROSCOPY | 2.76 | 1512 |
15 | 7MT7|1|a | Mtb 70S with P and E site tRNAs | ELECTRON MICROSCOPY | 2.71 | 1512 |
16 | 7KGB|1|a | CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9 | ELECTRON MICROSCOPY | 2.7 | 1511 |