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Equivalence class NR_4.0_97539.3 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17KGB|1|a (rep)Small subunit ribosomal RNA16S rRNAMycobacterium tuberculosis H37RvBacteriaRF00177CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9Electron microscopy2.72022-01-19
27MT7|1|aSmall subunit ribosomal RNA16S rRNAMycobacterium tuberculosis H37RvBacteriaRF00177Mtb 70S with P and E site tRNAsElectron microscopy2.712022-02-02
37MT2|1|aSmall subunit ribosomal RNA16S rRNAMycobacterium tuberculosis H37RvBacteriaRF00177Mtb 70S initiation complexElectron microscopy2.762022-02-02
48FR8|1|aSmall subunit ribosomal RNA16S rRNA (1511-MER)Mycolicibacterium smegmatis MC2 155BacteriaRF00177Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complexElectron microscopy2.762023-05-17
57MSM|1|aSmall subunit ribosomal RNA16S rRNAMycobacterium tuberculosis H37RvBacteriaRF00177Mtb 70SIC in complex with MtbEttA at Trans_R0 stateElectron microscopy2.792022-02-02
67MT3|1|aSmall subunit ribosomal RNA16S rRNAMycobacterium tuberculosis H37RvBacteriaRF00177Mtb 70S with P/E tRNAElectron microscopy2.82022-02-02
77MSC|1|aSmall subunit ribosomal RNA16S rRNAMycobacterium tuberculosis H37RvBacteriaRF00177Mtb 70SIC in complex with MtbEttA at Pre_R0 stateElectron microscopy2.972022-02-02
88V9L|1|aSmall subunit ribosomal RNA16S Ribosomal RNAMycolicibacterium smegmatis MC2 155BacteriaRF00177Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) and MsmegEF-Tu(GDP) (Composite structure 6)Electron microscopy32024-02-07
97MSZ|1|aSmall subunit ribosomal RNA16S rRNAMycobacterium tuberculosis H37RvBacteriaRF00177Mtb 70SIC in complex with MtbEttA at Trans_R1 stateElectron microscopy3.12022-02-02
108V9J|1|aSmall subunit ribosomal RNA16S Ribosomal RNAMycolicibacterium smegmatis MC2 155BacteriaRF00177Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) (Structure 4)Electron microscopy3.12024-02-07
118V9K|1|aSmall subunit ribosomal RNA16S Ribosomal RNAMycolicibacterium smegmatis MC2 155BacteriaRF00177Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Rv2629 (Balon) (Structure 5)Electron microscopy3.12024-02-07
127MSH|1|aSmall subunit ribosomal RNA16S rRNAMycobacterium tuberculosis H37RvBacteriaRF00177Mtb 70SIC in complex with MtbEttA at Pre_R1 stateElectron microscopy3.232022-02-02
135ZEB|1|aSmall subunit ribosomal RNA16S rRNAMycolicibacterium smegmatisBacteriaRF00177M. Smegmatis P/P state 70S ribosome structureElectron microscopy3.42018-09-26
145ZEP|1|aSmall subunit ribosomal RNA16S rRNAMycolicibacterium smegmatisBacteriaRF00177M. smegmatis hibernating state 70S ribosome structureElectron microscopy3.42018-09-26
156DZI|1|hSmall subunit ribosomal RNA16S rRNAMycolicibacterium smegmatisBacteriaRF00177Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complexElectron microscopy3.462018-09-26
165O5J|1|ASmall subunit ribosomal RNA16S rRNAMycolicibacterium smegmatisBacteriaRF00177Structure of the 30S small ribosomal subunit from Mycobacterium smegmatisElectron microscopy3.452017-07-12
175ZEU|1|aSmall subunit ribosomal RNA16S rRNAMycolicibacterium smegmatisBacteriaRF00177M. smegmatis P/P state 30S ribosomal subunitElectron microscopy3.72018-09-26
186DZK|1|ASmall subunit ribosomal RNA16S rRNAMycolicibacterium smegmatisBacteriaRF00177Cryo-EM Structure of Mycobacterium smegmatis C(minus) 30S ribosomal subunit with MPYElectron microscopy3.62018-09-19
195XYU|1|ASmall subunit ribosomal RNA16S RNAMycolicibacterium smegmatisBacteriaRF00177Small subunit of Mycobacterium smegmatis ribosomeElectron microscopy3.452017-09-27

Release history

Release3.3213.3223.323
Date2024-02-072024-02-142024-02-21

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
18FR8|1|aStructure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complexELECTRON MICROSCOPY2.761511
25ZEB|1|aM. Smegmatis P/P state 70S ribosome structureELECTRON MICROSCOPY3.41506
35ZEU|1|aM. smegmatis P/P state 30S ribosomal subunitELECTRON MICROSCOPY3.71506
45ZEP|1|aM. smegmatis hibernating state 70S ribosome structureELECTRON MICROSCOPY3.41506
55O5J|1|AStructure of the 30S small ribosomal subunit from Mycobacterium smegmatisELECTRON MICROSCOPY3.451511
66DZK|1|ACryo-EM Structure of Mycobacterium smegmatis C(minus) 30S ribosomal subunit with MPYELECTRON MICROSCOPY3.61511
76DZI|1|hCryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complexELECTRON MICROSCOPY3.461511
85XYU|1|ASmall subunit of Mycobacterium smegmatis ribosomeELECTRON MICROSCOPY3.451379
97MSZ|1|aMtb 70SIC in complex with MtbEttA at Trans_R1 stateELECTRON MICROSCOPY3.11512
107MSH|1|aMtb 70SIC in complex with MtbEttA at Pre_R1 stateELECTRON MICROSCOPY3.231512
117KGB|1|aCryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9ELECTRON MICROSCOPY2.71511
127MT7|1|aMtb 70S with P and E site tRNAsELECTRON MICROSCOPY2.711512
137MT2|1|aMtb 70S initiation complexELECTRON MICROSCOPY2.761512
147MSC|1|aMtb 70SIC in complex with MtbEttA at Pre_R0 stateELECTRON MICROSCOPY2.971512
157MSM|1|aMtb 70SIC in complex with MtbEttA at Trans_R0 stateELECTRON MICROSCOPY2.791512
167MT3|1|aMtb 70S with P/E tRNAELECTRON MICROSCOPY2.81512
178V9K|1|aCryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Rv2629 (Balon) (Structure 5)ELECTRON MICROSCOPY3.11511
188V9L|1|aCryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) and MsmegEF-Tu(GDP) (Composite structure 6)ELECTRON MICROSCOPY31511
198V9J|1|aCryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) (Structure 4)ELECTRON MICROSCOPY3.11511
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