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Equivalence class NR_all_00138.2 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18FRU|1|1 (rep)Large subunit ribosomal RNA28S rRNAGiardia intestinalis assemblage AEukaryaRF0254360S subunit of the Giardia lamblia 80S ribosomeElectron microscopy2.492024-01-31
27PWG|1|1+ 7PWG|1|4Large subunit ribosomal RNArRNA 28S, rRNA 5.8S, P-site tRNAGiardia lamblia ATCC 50803EukaryaRF02543Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolutionElectron microscopy2.752022-04-20
37PWO|1|1+ 7PWO|1|42Large subunit ribosomal RNArRNA 28S, rRNA 5.8S, P-site tRNAGiardia lamblia ATCC 50803EukaryaRF02543Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolutionElectron microscopy2.752022-04-20
48BTR|1|Lt+ 8BTR|1|LDLarge subunit ribosomal RNALarge Subunit rRNA, 5.8S rRNAGiardia lamblia ATCC 50803EukaryaRF02543Giardia Ribosome in PRE-T Hybrid State (D2)Electron microscopy3.252023-03-22
58BRM|1|Lt+ 8BRM|1|LDLarge subunit ribosomal RNALarge Subunit rRNA, 5.8S rRNAGiardia lamblia ATCC 50803EukaryaRF02543Giardia ribosome in POST-T state, no E-site tRNA (A6)Electron microscopy3.332023-03-15
68BR8|1|Lt+ 8BR8|1|LDLarge subunit ribosomal RNALarge Subunit rRNA, 5.8S rRNAGiardia lamblia ATCC 50803EukaryaRF02543Giardia ribosome in POST-T state (A1)Electron microscopy3.352023-03-15
78BSI|1|Lt+ 8BSI|1|LDLarge subunit ribosomal RNALarge Subunit rRNA, 5.8S rRNAGiardia intestinalisEukaryaRF02543Giardia ribosome chimeric hybrid-like GDP+Pi bound state (B1)Electron microscopy3.42023-03-15
88BTD|1|Lt+ 8BTD|1|LDLarge subunit ribosomal RNALarge Subunit rRNA, 5.8S rRNAGiardia lamblia ATCC 50803EukaryaRF02543Giardia Ribosome in PRE-T Hybrid State (D1)Electron microscopy4.92023-03-22
98BSJ|1|Lt+ 8BSJ|1|LDLarge subunit ribosomal RNALarge Subunit rRNA, 5.8S rRNAGiardia intestinalisEukaryaRF02543Giardia Ribosome in PRE-T Classical State (C)Electron microscopy6.492023-03-22

Release history

Release3.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.3323.3333.3343.335
Date2024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-012024-05-082024-05-15

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
18BTD|1|Lt+8BTD|1|LDGiardia Ribosome in PRE-T Hybrid State (D1)ELECTRON MICROSCOPY4.92593
28BTR|1|Lt+8BTR|1|LDGiardia Ribosome in PRE-T Hybrid State (D2)ELECTRON MICROSCOPY3.252593
38BSI|1|Lt+8BSI|1|LDGiardia ribosome chimeric hybrid-like GDP+Pi bound state (B1)ELECTRON MICROSCOPY3.42593
48BR8|1|Lt+8BR8|1|LDGiardia ribosome in POST-T state (A1)ELECTRON MICROSCOPY3.352593
58BSJ|1|Lt+8BSJ|1|LDGiardia Ribosome in PRE-T Classical State (C)ELECTRON MICROSCOPY6.492593
67PWG|1|1+7PWG|1|4Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolutionELECTRON MICROSCOPY2.752426
77PWO|1|1+7PWO|1|42Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolutionELECTRON MICROSCOPY2.752424
88FRU|1|160S subunit of the Giardia lamblia 80S ribosomeELECTRON MICROSCOPY2.492551
98BRM|1|Lt+8BRM|1|LDGiardia ribosome in POST-T state, no E-site tRNA (A6)ELECTRON MICROSCOPY3.332594
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