#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
12UUA|1|Y+ 2UUA|1|X (rep)5'-R(*CP*CP*UP*CP*CP*CP*UP*CM0P*AP*CP*6MZP*AP *GP*GP*AP*GP*G)-3', 5'-R(*GP*UP*CP*AP*AP*AP)-3'Thermus thermophilusStructure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUC-codon in the A-site and paromomycin.X-ray diffraction2.92007-05-15
22JRG|1|A5'-R(*CP*CP*UP*CP*CP*CP*UP*(CM0)P*AP*CP*(6MZ)P*AP*GP*GP*AP*GP*G)-3'NMR solution structure of the anticodon of E. coli TRNA-VAL3 with 2 modifications (cmo5U34 M6A37)Solution NMR2007-07-24
32UUC|1|Y+ 2UUC|1|X5'-R(*CP*CP*UP*CP*CP*CP*UP*CM0P*AP*CP*6MZP*AP *GP*GP*AP*GP*G)-3', 5'-R(*GP*UP*AP*AP*AP*AP)-3'Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUA-codon in the A-site and paromomycin.X-ray diffraction3.12007-05-22
42UU9|1|Y+ 2UU9|1|XRNAThermus thermophilusStructure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUG-codon in the A-site and paromomycin.X-ray diffraction3.12007-05-15
52UUB|1|Y+ 2UUB|1|X5'-R(*CP*CP*UP*CP*CP*CP*UP*CM0P*AP*CP*6MZP*AP *GP*GP*AP*GP*G)-3', 5'-R(*GP*UP*UP*AP*AP*AP)-3'Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUU-codon in the A-site and paromomycin.X-ray diffraction2.82007-05-15

Release history

Release2.462.472.482.492.502.512.522.532.542.552.562.572.582.592.602.612.622.632.642.652.662.672.682.692.702.712.722.732.742.752.762.772.782.792.802.812.822.832.842.852.862.872.882.892.902.912.92
Date2015-10-232015-10-302015-11-062015-11-132015-11-202015-11-272015-12-042015-12-112015-12-182015-12-252016-01-012016-01-082016-01-152016-01-222016-01-292016-02-052016-02-122016-02-192016-02-262016-03-042016-03-112016-03-182016-03-252016-04-012016-04-082016-04-152016-04-222016-04-292016-05-062016-05-132016-05-202016-05-272016-06-032016-06-102016-06-172016-06-242016-07-012016-07-082016-07-152016-07-222016-07-292016-08-052016-08-122016-08-192016-08-262016-09-022016-09-09

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_03697.2NR_all_03697.12.46(4) 2UUB|1|Y+2UUB|1|X, 2UUA|1|Y+2UUA|1|X, 2UU9|1|Y+2UU9|1|X, 2UUC|1|Y+2UUC|1|X(1) 2JRG|1|A(0)
NR_all_03697.2NR_all_26935.12.46(1) 2JRG|1|A(4) 2UUC|1|Y+2UUC|1|X, 2UUB|1|Y+2UUB|1|X, 2UUA|1|Y+2UUA|1|X, 2UU9|1|Y+2UU9|1|X(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_03697.2NR_all_03697.32.93(4) 2UUA|1|Y+2UUA|1|X, 2UUC|1|Y+2UUC|1|X, 2UU9|1|Y+2UU9|1|X, 2UUB|1|Y+2UUB|1|X(1) 2JRG|1|A(0)
NR_all_03697.2NR_all_76431.12.93(1) 2JRG|1|A(4) 2UUA|1|Y+2UUA|1|X, 2UUC|1|Y+2UUC|1|X, 2UU9|1|Y+2UU9|1|X, 2UUB|1|Y+2UUB|1|X(0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
12UUB|1|Y+2UUB|1|XStructure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUU-codon in the A-site and paromomycin.X-RAY DIFFRACTION2.89
22UU9|1|Y+2UU9|1|XStructure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUG-codon in the A-site and paromomycin.X-RAY DIFFRACTION3.111
32UUC|1|Y+2UUC|1|XStructure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUA-codon in the A-site and paromomycin.X-RAY DIFFRACTION3.111
42UUA|1|Y+2UUA|1|XStructure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUC-codon in the A-site and paromomycin.X-RAY DIFFRACTION2.911
52JRG|1|ANMR solution structure of the anticodon of E. coli TRNA-VAL3 with 2 modifications (cmo5U34 M6A37)SOLUTION NMR15
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