Equivalence class NR_all_05887.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7YSE|1|E (rep) | RNA (76-MER) | Escherichia coli | Bacteria | Crystal structure of E. coli hetertetrameric GlyRS in complex with tRNA | X-ray diffraction | 2.907 | 2023-02-01 | ||
| 2 | 7F36|1|F | Transfer RNA | RNA (76-MER) | Escherichia coli | Bacteria | RF00005 | TacT complexed with acetyl-glycyl-tRNAGly | X-ray diffraction | 3.098 | 2021-12-22 |
| 3 | 7F36|1|G | Transfer RNA | RNA (76-MER) | Escherichia coli | Bacteria | RF00005 | TacT complexed with acetyl-glycyl-tRNAGly | X-ray diffraction | 3.098 | 2021-12-22 |
| 4 | 7F36|1|E | Transfer RNA | RNA (76-MER) | Escherichia coli | Bacteria | RF00005 | TacT complexed with acetyl-glycyl-tRNAGly | X-ray diffraction | 3.098 | 2021-12-22 |
| 5 | 7F36|1|H | Transfer RNA | RNA (76-MER) | Escherichia coli | Bacteria | RF00005 | TacT complexed with acetyl-glycyl-tRNAGly | X-ray diffraction | 3.098 | 2021-12-22 |
| 6 | 7YSE|1|F | RNA (76-MER) | Escherichia coli | Bacteria | Crystal structure of E. coli hetertetrameric GlyRS in complex with tRNA | X-ray diffraction | 2.907 | 2023-02-01 | ||
| 7 | 7ZQ6|1|M | Transfer RNA | Gly-tRNA | Escherichia coli | Bacteria | RF00005 | 70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain | Electron microscopy | 2.75 | 2022-08-10 |
| 8 | 6OM6|1|5 | Transfer RNA | tRNA(gly), mRNA | Escherichia coli | Bacteria | RF00005 | Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA | Electron microscopy | 3.1 | 2021-02-10 |
| 9 | 3J46|1|p | Transfer RNA | P-tRNA | Escherichia coli | Bacteria | RF00005 | Structure of the SecY protein translocation channel in action | Electron microscopy | 10.1 | 2013-10-23 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_05887.1 | NR_all_04953.1 | 3.268 | (4) 7F36|1|G, 7F36|1|F, 7F36|1|E, 7F36|1|H | (5) 7ZQ6|1|M, 7YSE|1|F, 7YSE|1|E, 6OM6|1|5, 3J46|1|p | (0) |
| NR_all_05887.1 | NR_all_26825.1 | 3.268 | (3) 7ZQ6|1|M, 6OM6|1|5, 3J46|1|p | (6) 7YSE|1|F, 7YSE|1|E, 7F36|1|H, 7F36|1|G, 7F36|1|F, 7F36|1|E | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7F36|1|F | TacT complexed with acetyl-glycyl-tRNAGly | X-RAY DIFFRACTION | 3.098 | 76 |
| 2 | 7F36|1|G | TacT complexed with acetyl-glycyl-tRNAGly | X-RAY DIFFRACTION | 3.098 | 76 |
| 3 | 7F36|1|E | TacT complexed with acetyl-glycyl-tRNAGly | X-RAY DIFFRACTION | 3.098 | 73 |
| 4 | 7F36|1|H | TacT complexed with acetyl-glycyl-tRNAGly | X-RAY DIFFRACTION | 3.098 | 72 |
| 5 | 7YSE|1|F | Crystal structure of E. coli hetertetrameric GlyRS in complex with tRNA | X-RAY DIFFRACTION | 2.907 | 64 |
| 6 | 7YSE|1|E | Crystal structure of E. coli hetertetrameric GlyRS in complex with tRNA | X-RAY DIFFRACTION | 2.907 | 76 |
| 7 | 6OM6|1|5 | Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA | ELECTRON MICROSCOPY | 3.1 | 74 |
| 8 | 7ZQ6|1|M | 70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain | ELECTRON MICROSCOPY | 2.75 | 76 |
| 9 | 3J46|1|p | Structure of the SecY protein translocation channel in action | ELECTRON MICROSCOPY | 10.1 | 76 |