Equivalence class NR_all_07902.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5GAN|1|V+ 5GAN|1|W (rep) | U4 spliceosomal RNA + U6 spliceosomal RNA | U4 snRNA, U6 snRNA | Saccharomyces cerevisiae | Eukarya | RF00015 + RF00026 | The overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 Angstrom | Electron microscopy | 3.7 | 2016-01-27 |
| 2 | 5GAO|1|V | Saccharomyces cerevisiae strain UOA_M2 chromosome 5 sequence | Saccharomyces cerevisiae | Head region of the yeast spliceosomal U4/U6.U5 tri-snRNP | Electron microscopy | 4.2 | 2016-01-27 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_07902.1 | NR_20.0_07902.2 | 2.64 | (2) 5GAO|1|V, 5GAN|1|V+5GAN|1|W | (0) | (1) 3JCM|1|E |
| NR_all_07902.1 | NR_4.0_07902.2 | 2.64 | (1) 5GAN|1|V+5GAN|1|W | (1) 5GAO|1|V | (1) 3JCM|1|E |
| NR_all_07902.1 | NR_all_07902.2 | 2.64 | (2) 5GAO|1|V, 5GAN|1|V+5GAN|1|W | (0) | (1) 3JCM|1|E |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5GAN|1|V+5GAN|1|W | The overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 Angstrom | ELECTRON MICROSCOPY | 3.7 | 124 |
| 2 | 5GAO|1|V | Head region of the yeast spliceosomal U4/U6.U5 tri-snRNP | ELECTRON MICROSCOPY | 4.2 | 57 |