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Equivalence class NR_all_09297.1 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17O5B|1|U (rep)Transfer RNAtRNA, mRNABacillus subtilis subsp. subtilis str. 168BacteriaRF00005Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP boundElectron microscopy3.332022-02-02
27QV1|1|HTransfer RNAP-site tRNA, mRNABacillus subtilis subsp. subtilis str. 168BacteriaRF00005Bacillus subtilis collided disome (Leading 70S)Electron microscopy3.52022-03-09
37QV2|1|HTransfer RNAA/P-site tRNA, mRNABacillus subtilis subsp. subtilis str. 168BacteriaRF00005Bacillus subtilis collided disome (Collided 70S)Electron microscopy3.52022-03-09
47QV2|1|xTransfer RNAP/E-site tRNA, mRNABacillus subtilis subsp. subtilis str. 168BacteriaRF00005Bacillus subtilis collided disome (Collided 70S)Electron microscopy3.52022-03-09
53J9W|1|AXTransfer RNAtRNA-Asp, mRNABacillus subtilisBacteriaRF00005Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complexElectron microscopy3.92015-04-29
67QV3|1|HTransfer RNAP-site tRNA, mRNABacillus subtilis subsp. subtilis str. 168BacteriaRF00005Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)Electron microscopy5.142022-03-09

Release history

Release3.221
Date2022-03-09

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_09297.1NR_all_04831.13.221(2) 7O5B|1|U, 3J9W|1|AX(4) 7QV3|1|H, 7QV2|1|x, 7QV2|1|H, 7QV1|1|H(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_09297.1NR_all_09297.23.222(6) 7QV1|1|H, 7O5B|1|U, 3J9W|1|AX, 7QV3|1|H, 7QV2|1|x, 7QV2|1|H(0) (3) 7QGU|1|z, 7QH4|1|y, 7QH4|1|1

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17O5B|1|UCryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP boundELECTRON MICROSCOPY3.3377
27QV3|1|HBacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)ELECTRON MICROSCOPY5.1477
37QV1|1|HBacillus subtilis collided disome (Leading 70S)ELECTRON MICROSCOPY3.577
43J9W|1|AXCryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complexELECTRON MICROSCOPY3.977
57QV2|1|HBacillus subtilis collided disome (Collided 70S)ELECTRON MICROSCOPY3.577
67QV2|1|xBacillus subtilis collided disome (Collided 70S)ELECTRON MICROSCOPY3.576
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