BGSU RNA Site //

Equivalence class NR_all_12971.5 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodÅDate
17P7Q|1|B (rep)5S ribosomal RNA5S rRNAEnterococcus faecalisBacteriaRF00001E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volumeElectron microscopy2.42022-02-23
26W6P|1|B5S ribosomal RNA5S rRNAEnterococcus faecalisBacteriaRF00001MultiBody Refinement of 70S Ribosome from Enterococcus faecalisElectron microscopy2.92020-10-14
37P7T|1|B5S ribosomal RNA5S rRNAEnterococcus faecalisBacteriaRF00001PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state IIIElectron microscopy2.92022-02-23
47NHK|1|B5S ribosomal RNA5S rRNAEnterococcus faecalisBacteriaRF00001LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalisElectron microscopy2.92021-05-05
57P7S|1|B5S ribosomal RNA5S rRNAEnterococcus faecalisBacteriaRF00001PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state IIElectron microscopy32022-02-23
66WU9|1|B5S ribosomal RNA5S rRNAEnterococcus faecalis OG1RFBacteriaRF0000150S subunit of 70S Ribosome Enterococcus faecalis MultiBody refinementElectron microscopy2.92020-11-04
77P7U|1|B5S ribosomal RNA5S rRNAEnterococcus faecalisBacteriaRF00001E. faecalis 70S ribosome with P-tRNA, state IVElectron microscopy3.12022-02-23
86O90|1|B5S ribosomal RNA4S rRNAEnterococcus faecalisBacteriaRF00001Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05Electron microscopy3.492020-09-23
96O8Z|1|B5S ribosomal RNA5S rRNAEnterococcus faecalisBacteriaRF00001Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04Electron microscopy3.492020-09-16
106O8W|1|B5S ribosomal RNA5S rRNAEnterococcus faecalisBacteriaRF00001Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01Electron microscopy3.532020-09-23
116O8X|1|B5S ribosomal RNA5S rRNAEnterococcus faecalisBacteriaRF00001Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02Electron microscopy3.682020-09-23
126O8Y|1|B5S ribosomal RNA5S rRNAEnterococcus faecalisBacteriaRF00001Cryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class03Electron microscopy4.142020-09-23

Release history

Release3.2193.2203.2213.222
Date2022-02-232022-03-022022-03-092022-03-16

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_12971.5NR_all_12971.43.219(8) 6W6P|1|B, 6O90|1|B, 6O8Z|1|B, 6O8Y|1|B, 6O8X|1|B, 6O8W|1|B, 7NHK|1|B, 6WU9|1|B(4) 7P7Q|1|B, 7P7U|1|B, 7P7T|1|B, 7P7S|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_12971.5NR_all_12971.63.223(12) 7P7U|1|B, 7P7T|1|B, 7P7S|1|B, 7P7Q|1|B, 7NHK|1|B, 6WU9|1|B, 6W6P|1|B, 6O90|1|B, 6O8Z|1|B, 6O8Y|1|B, 6O8X|1|B, 6O8W|1|B(0) (1) 7P7R|1|B

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17NHK|1|BLsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalisELECTRON MICROSCOPY2.9114
27P7Q|1|BE. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volumeELECTRON MICROSCOPY2.4114
37P7S|1|BPoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state IIELECTRON MICROSCOPY3114
47P7T|1|BPoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state IIIELECTRON MICROSCOPY2.9114
57P7U|1|BE. faecalis 70S ribosome with P-tRNA, state IVELECTRON MICROSCOPY3.1114
66O8Y|1|BCryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class03ELECTRON MICROSCOPY4.14116
76O8X|1|BCryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class02ELECTRON MICROSCOPY3.68116
86O90|1|BCryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class05ELECTRON MICROSCOPY3.49116
96O8Z|1|BCryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class04ELECTRON MICROSCOPY3.49116
106WU9|1|B50S subunit of 70S Ribosome Enterococcus faecalis MultiBody refinementELECTRON MICROSCOPY2.9116
116W6P|1|BMultiBody Refinement of 70S Ribosome from Enterococcus faecalisELECTRON MICROSCOPY2.9116
126O8W|1|BCryo-EM image reconstruction of the 70S Ribosome Enterococcus faecalis Class01ELECTRON MICROSCOPY3.53116