#IFECompound(s)RNA source organismTitleMethodResolutionDate
14U4U|1|7 (rep)5S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Lycorine bound to the yeast 80S ribosomeX-RAY DIFFRACTION32014-10-22
24U4N|1|75S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Edeine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.12014-10-22
34U4R|1|75S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.82014-10-22
45FCJ|1|75S ribosomal RNASaccharomyces cerevisiaeStructure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosomeX-RAY DIFFRACTION3.12016-05-11
54U4Q|1|75S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-RAY DIFFRACTION32014-10-22
64U3M|1|75.8s rRNASaccharomyces cerevisiaeCrystal structure of Anisomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION32014-10-22
74U55|1|75S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22
84U6F|1|35S ribosomal RNASaccharomyces cerevisiaeCrystal structure of T-2 toxin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.12014-10-22
94U51|1|75S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Narciclasine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22
104U3U|1|35S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Cycloheximide bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.92014-10-22
114U4R|1|35S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Lactimidomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.82014-10-22
124U52|1|35S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Nagilactone C bound to the yeast 80S ribosomeX-RAY DIFFRACTION32014-10-22
134U3N|1|35S ribosomal RNASaccharomyces cerevisiaeCrystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22
144U3U|1|75S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Cycloheximide bound to the yeast 80S ribosomeX-RAY DIFFRACTION2.92014-10-22
154U50|1|75S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Verrucarin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22
164U52|1|75S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Nagilactone C bound to the yeast 80S ribosomeX-RAY DIFFRACTION32014-10-22
174U4Z|1|75S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.12014-10-22
185APO|1|75S ribosomal RNASaccharomyces cerevisiaeStructure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and C-terminally tagged Rei1ELECTRON MICROSCOPY3.412015-12-16
194U3N|1|75S ribosomal RNASaccharomyces cerevisiaeCrystal structure of CCA trinucleotide bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22
204V8T|1|75S RIBOSOMAL RNASaccharomyces cerevisiaeCryo-EM Structure of the 60S Ribosomal Subunit in Complex with Arx1 and Rei1ELECTRON MICROSCOPY8.12014-07-09
214V88|1|A35S rRNASaccharomyces cerevisiaeThe structure of the eukaryotic ribosome at 3.0 A resolution.X-RAY DIFFRACTION32014-07-09
224V88|1|A75S rRNASaccharomyces cerevisiaeThe structure of the eukaryotic ribosome at 3.0 A resolution.X-RAY DIFFRACTION32014-07-09
234V8Z|1|B75S RIBOSOMAL RNASaccharomyces cerevisiaeCryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation ComplexELECTRON MICROSCOPY6.62014-07-09
244V8Y|1|B75S RIBOSOMAL RNASaccharomyces cerevisiaeCryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation ComplexELECTRON MICROSCOPY4.32014-07-09
254U4N|1|35S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Edeine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.12014-10-22
265FCJ|1|35S ribosomal RNASaccharomyces cerevisiaeStructure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosomeX-RAY DIFFRACTION3.12016-05-11
275I4L|1|35S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.12016-06-22
284U4Q|1|35S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Homoharringtonine bound to the yeast 80S ribosomeX-RAY DIFFRACTION32014-10-22
295FCI|1|35S ribosomal RNASaccharomyces cerevisiaeStructure of the vacant uL3 W255C mutant 80S yeast ribosomeX-RAY DIFFRACTION3.42016-05-11
304U53|1|35S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.32014-10-22
314U3M|1|35.8s rRNASaccharomyces cerevisiaeCrystal structure of Anisomycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION32014-10-22
324U4Z|1|35S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Phyllanthoside bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.12014-10-22
334U55|1|35S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Cryptopleurine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22
344U4U|1|35S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Lycorine bound to the yeast 80S ribosomeX-RAY DIFFRACTION32014-10-22
354U51|1|35S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Narciclasine bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22
365I4L|1|75S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Amicoumacin A bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.12016-06-22
375DC3|1|75S ribosomal RNASaccharomyces cerevisiaeComplex of yeast 80S ribosome with non-modified eIF5AX-RAY DIFFRACTION3.252016-06-01
384U4Y|1|75S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Pactamycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22
394U6F|1|75S ribosomal RNASaccharomyces cerevisiaeCrystal structure of T-2 toxin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.12014-10-22
405DC3|1|35S ribosomal RNASaccharomyces cerevisiaeComplex of yeast 80S ribosome with non-modified eIF5AX-RAY DIFFRACTION3.252016-06-01
414U56|1|35S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Blasticidin S bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.452014-10-22
424U4Y|1|35S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Pactamycin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22
434U53|1|75S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Deoxynivalenol bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.32014-10-22
444U50|1|35S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Verrucarin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.22014-10-22
454U4O|1|35S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Geneticin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.62014-10-22
463J78|1|5S5S ribosomal RNASaccharomyces cerevisiaeStructures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)ELECTRON MICROSCOPY6.32014-08-06
474U56|1|75S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Blasticidin S bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.452014-10-22
485APN|1|75S rRNASaccharomyces cerevisiaeStructure of the yeast 60S ribosomal subunit in complex with Arx1, Alb1 and N-terminally tagged Rei1ELECTRON MICROSCOPY3.912015-12-16
495FCI|1|75S ribosomal RNASaccharomyces cerevisiaeStructure of the vacant uL3 W255C mutant 80S yeast ribosomeX-RAY DIFFRACTION3.42016-05-11
503J6Y|1|5S5S ribosomal RNASaccharomyces cerevisiaeS. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 2 degree rotation (Class I)ELECTRON MICROSCOPY6.12014-06-11
514U4O|1|75S ribosomal RNASaccharomyces cerevisiaeCrystal structure of Geneticin bound to the yeast 80S ribosomeX-RAY DIFFRACTION3.62014-10-22
523JCT|1|3RDN5-2 rRNASaccharomyces cerevisiaeCryo-em structure of eukaryotic pre-60S ribosomal subunitsELECTRON MICROSCOPY3.082016-06-01
533J77|1|5S5S ribosomal RNASaccharomyces cerevisiaeStructures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)ELECTRON MICROSCOPY6.22014-08-06
543J6X|1|5S5S ribosomal RNASaccharomyces cerevisiaeS. cerevisiae 80S ribosome bound with Taura syndrome virus (TSV) IRES, 5 degree rotation (Class II)ELECTRON MICROSCOPY6.12014-06-11
554V6I|1|DC5S rRNASaccharomyces cerevisiaeLocalization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosomeELECTRON MICROSCOPY8.82014-07-09
565GAK|1|35S rRNASaccharomyces cerevisiaeYeast 60S ribosomal subunit with A-site tRNA, P-site tRNA and eIF-5AELECTRON MICROSCOPY3.882016-02-24
574V7R|1|D25S ribosomal RNASaccharomyces cerevisiaeYeast 80S ribosome.X-RAY DIFFRACTION42014-07-09
584V7R|1|B25S ribosomal RNASaccharomyces cerevisiaeYeast 80S ribosome.X-RAY DIFFRACTION42014-07-09
595FL8|1|z5S ribosomal RNASaccharomyces cerevisiaeCRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLEELECTRON MICROSCOPY9.52015-12-02
604V7F|1|35S ribosomal RNASaccharomyces cerevisiaeArx1 pre-60S particle.ELECTRON MICROSCOPY8.72014-07-09

Release history

Release2.812.822.832.842.852.862.872.882.892.90
Date2016-06-242016-07-012016-07-082016-07-152016-07-222016-07-292016-08-052016-08-122016-08-192016-08-26

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_18586.7NR_20.0_18586.82.91(59) 4U51|1|7, 4U52|1|7, 4U53|1|7, 4U55|1|7, 3J6X|1|5S, 4U56|1|7, 3J77|1|5S, 4U6F|1|7, 3JCT|1|3, 4V7F|1|3, 4U3M|1|7, 4V7R|1|D2, 4U3N|1|7, 4V88|1|A7, 4U3U|1|7, 4V8Y|1|B7, 4U4N|1|7, 5APN|1|7, 4U4O|1|7, 5DC3|1|3, 4U4Q|1|7, 5FCI|1|3, 4U4R|1|7, 5FCJ|1|3, 4U4U|1|7, 5GAK|1|3, 4U4Y|1|7, 5I4L|1|7, 4U4Z|1|7, 4U50|1|7, 4U52|1|3, 4U53|1|3, 4U55|1|3, 4U56|1|3, 3J6Y|1|5S, 4U6F|1|3, 3J78|1|5S, 4V6I|1|DC, 4U3M|1|3, 4V7R|1|B2, 4U3N|1|3, 4V88|1|A3, 4U3U|1|3, 4V8T|1|7, 4U4N|1|3, 4V8Z|1|B7, 4U4O|1|3, 5APO|1|7, 4U4Q|1|3, 5DC3|1|7, 4U4R|1|3, 5FCI|1|7, 4U4U|1|3, 5FCJ|1|7, 4U4Y|1|3, 5I4L|1|3, 4U4Z|1|3, 4U50|1|3, 4U51|1|3(1) 5FL8|1|z(2) 5DAT|1|7, 5DAT|1|3
NR_all_18586.7NR_3.0_18586.82.91(14) 4U3M|1|3, 4U4R|1|7, 4U4R|1|3, 4U4U|1|3, 4U52|1|7, 4U4U|1|7, 4U52|1|3, 4U3U|1|3, 4U3M|1|7, 4U3U|1|7, 4V88|1|A7, 4V88|1|A3, 4U4Q|1|7, 4U4Q|1|3(46) 4U4N|1|3, 5GAK|1|3, 4U55|1|3, 4U4Y|1|3, 3J6Y|1|5S, 4U6F|1|3, 4U3N|1|3, 4V7R|1|B2, 4U4O|1|3, 4V8Z|1|B7, 4U4Z|1|3, 5DC3|1|7, 4U51|1|3, 5FCJ|1|7, 5I4L|1|7, 3J78|1|5S, 4U50|1|3, 4U53|1|3, 4U56|1|3, 4V6I|1|DC, 4V8T|1|7, 5APO|1|7, 5FCI|1|7, 4U4O|1|7, 5APN|1|7, 4U4Z|1|7, 5FCI|1|3, 4U51|1|7, 5FL8|1|z, 4U55|1|7, 3J6X|1|5S, 4U6F|1|7, 3JCT|1|3, 4V7R|1|D2, 4U4N|1|7, 4U4Y|1|7, 4U50|1|7, 4U53|1|7, 4U56|1|7, 3J77|1|5S, 4V7F|1|3, 4U3N|1|7, 4V8Y|1|B7, 5DC3|1|3, 5FCJ|1|3, 5I4L|1|3(0)
NR_all_18586.7NR_3.5_18586.82.91(44) 4U4Z|1|3, 4U4Y|1|3, 4U4U|1|3, 4U4Q|1|7, 4U4N|1|7, 4U3U|1|7, 4U4R|1|3, 4U4Q|1|3, 4U4Y|1|7, 4U4U|1|7, 4U4N|1|3, 4U4R|1|7, 4U3U|1|3, 4V88|1|A7, 4U3N|1|7, 4U6F|1|7, 4U3M|1|7, 5FCJ|1|7, 5FCI|1|3, 5FCI|1|7, 4U56|1|7, 4V88|1|A3, 4U3N|1|3, 4U6F|1|3, 5I4L|1|3, 5FCJ|1|3, 4U3M|1|3, 5DC3|1|3, 4U51|1|3, 4U50|1|3, 5I4L|1|7, 4U52|1|7, 4U51|1|7, 5DC3|1|7, 4U50|1|7, 5APO|1|7, 4U4Z|1|7, 4U53|1|3, 4U52|1|3, 4U53|1|7, 4U55|1|7, 3JCT|1|3, 4U56|1|3, 4U55|1|3(16) 5FL8|1|z, 4V8T|1|7, 3J78|1|5S, 5GAK|1|3, 4U4O|1|7, 3J6Y|1|5S, 3J77|1|5S, 4V7F|1|3, 4V7R|1|D2, 4V6I|1|DC, 4V8Y|1|B7, 5APN|1|7, 4U4O|1|3, 3J6X|1|5S, 4V8Z|1|B7, 4V7R|1|B2(2) 5DAT|1|3, 5DAT|1|7
NR_all_18586.7NR_4.0_18586.82.91(50) 4U4U|1|7, 4U4R|1|3, 4V7R|1|D2, 4U56|1|7, 4U4Y|1|3, 4U6F|1|3, 4U4R|1|7, 4V88|1|A3, 4U4Q|1|3, 4U6F|1|7, 4U4U|1|3, 4U56|1|3, 4U4Q|1|7, 4V7R|1|B2, 5I4L|1|3, 5FCJ|1|3, 5FCI|1|3, 5APN|1|7, 4U51|1|3, 4U4Z|1|3, 5I4L|1|7, 5APO|1|7, 4U4Z|1|7, 5FCJ|1|7, 5FCI|1|7, 4U51|1|7, 5DC3|1|3, 4U50|1|3, 5GAK|1|3, 4V88|1|A7, 4U4Y|1|7, 5DC3|1|7, 4U50|1|7, 4U52|1|7, 4U3M|1|7, 4U55|1|3, 4U55|1|7, 4U53|1|3, 4U3N|1|3, 3JCT|1|3, 4U53|1|7, 4U3N|1|7, 4U52|1|3, 4U3M|1|3, 4U4O|1|7, 4U3U|1|7, 4U4N|1|3, 4U4N|1|7, 4U3U|1|3, 4U4O|1|3(10) 4V8Z|1|B7, 3J6X|1|5S, 4V7F|1|3, 4V8Y|1|B7, 3J77|1|5S, 4V6I|1|DC, 5FL8|1|z, 3J6Y|1|5S, 4V8T|1|7, 3J78|1|5S(2) 5DAT|1|7, 5DAT|1|3
NR_all_18586.7NR_all_18586.82.91(60) 3J6Y|1|5S, 3J78|1|5S, 4U3M|1|3, 4U3N|1|3, 4U3U|1|3, 5GAK|1|3, 4U4Z|1|3, 5I4L|1|7, 4U50|1|3, 4U51|1|3, 4U52|1|3, 4U53|1|3, 4U55|1|3, 4U56|1|3, 4U6F|1|3, 4V6I|1|DC, 4V7R|1|B2, 4V88|1|A3, 4V8T|1|7, 4U4N|1|3, 4V8Z|1|B7, 4U4O|1|3, 5APO|1|7, 4U4Q|1|3, 5DC3|1|7, 4U4R|1|3, 5FCI|1|7, 4U4U|1|3, 5FCJ|1|7, 4U4Y|1|3, 3J6X|1|5S, 3J77|1|5S, 3JCT|1|3, 4U3M|1|7, 4U3N|1|7, 4U3U|1|7, 5FL8|1|z, 4U4Y|1|7, 5I4L|1|3, 4U4Z|1|7, 4U50|1|7, 4U51|1|7, 4U52|1|7, 4U53|1|7, 4U55|1|7, 4U56|1|7, 4U6F|1|7, 4V7F|1|3, 4V7R|1|D2, 4V88|1|A7, 4V8Y|1|B7, 4U4N|1|7, 5APN|1|7, 4U4O|1|7, 5DC3|1|3, 4U4Q|1|7, 5FCI|1|3, 4U4R|1|7, 5FCJ|1|3, 4U4U|1|7(0) (2) 5DAT|1|3, 5DAT|1|7

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength