Equivalence class NR_all_19377.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5M3H|1|V+ 5M3H|1|R (rep) | RNA 5'-pAGUAGUAACAAGAGGG, RNA (5'-R(*UP*AP*UP*AP*CP*CP*UP*CP*UP*GP*CP*UP*U)-3') | Influenza A virus | Bat influenza A/H17N10 polymerase bound to four heptad repeats of serine 5 phosphorylated Pol II CTD | X-ray diffraction | 2.5 | 2016-12-21 | |||
| 2 | 6EVK|1|V+ 6EVK|1|R | RNA (5'-R(P*AP*GP*UP*AP*GP*UP*AP*AP*CP*AP*AP*GP*AP*GP*GP*G)-3'), RNA (5'-R(*UP*AP*UP*AP*CP*CP*UP*CP*UP*GP*CP*UP*U)-3') | Influenza A virus | Crystal structure of bat influenza A/H17N10 polymerase with viral RNA promoter and cap analogue m7GTP | X-ray diffraction | 2.9 | 2017-12-13 | |||
| 3 | 6EVJ|1|V+ 6EVJ|1|R | RNA (5'-R(P*AP*GP*UP*AP*GP*UP*AP*AP*CP*AP*AP*GP*AP*GP*G)-3'), RNA (5'-R(*UP*AP*UP*AP*CP*CP*UP*CP*UP*GP*CP*UP*U)-3') | Influenza A virus | Crystal structure of bat influenza A/H17N10 polymerase with viral RNA promoter and capped RNA primer | X-ray diffraction | 3.9 | 2017-12-13 | |||
| 4 | 6EVJ|1|U+ 6EVJ|1|S | RNA (5'-R(P*AP*GP*UP*AP*GP*UP*AP*AP*CP*AP*AP*GP*AP*GP*G)-3'), RNA (5'-R(*UP*AP*UP*AP*CP*CP*UP*CP*UP*GP*CP*UP*U)-3') | Influenza A virus | Crystal structure of bat influenza A/H17N10 polymerase with viral RNA promoter and capped RNA primer | X-ray diffraction | 3.9 | 2017-12-13 |
Release history
| Release | 3.9 | 3.10 | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 | 3.48 | 3.49 | 3.50 | 3.51 | 3.52 | 3.53 | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-02-16 | 2018-02-23 | 2018-03-01 | 2018-03-08 | 2018-03-15 | 2018-03-22 | 2018-03-29 | 2018-04-06 | 2018-04-13 | 2018-04-20 | 2018-04-27 | 2018-05-04 | 2018-05-11 | 2018-05-18 | 2018-05-25 | 2018-06-01 | 2018-06-08 | 2018-06-15 | 2018-06-22 | 2018-06-29 | 2018-07-06 | 2018-07-13 | 2018-07-20 | 2018-07-27 | 2018-08-03 | 2018-08-10 | 2018-08-17 | 2018-08-24 | 2018-08-31 | 2018-09-07 | 2018-09-14 | 2018-09-21 | 2018-09-28 | 2018-10-05 | 2018-10-12 | 2018-10-19 | 2018-10-26 | 2018-11-02 | 2018-11-09 | 2018-11-16 | 2018-11-23 | 2018-11-30 | 2018-12-07 | 2018-12-14 | 2018-12-21 | 2018-12-28 | 2019-01-04 | 2019-01-11 | 2019-01-18 | 2019-01-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_19377.1 | NR_all_63925.1 | 3.9 | (1) 5M3H|1|V+5M3H|1|R | (3) 6EVJ|1|U+6EVJ|1|S, 6EVJ|1|V+6EVJ|1|R, 6EVK|1|V+6EVK|1|R | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_19377.1 | NR_all_19377.2 | 3.59 | (4) 6EVJ|1|U+6EVJ|1|S, 5M3H|1|V+5M3H|1|R, 6EVK|1|V+6EVK|1|R, 6EVJ|1|V+6EVJ|1|R | (0) | (2) 6FHI|1|V+6FHI|1|R, 6FHH|1|V+6FHH|1|R |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5M3H|1|V+5M3H|1|R | Bat influenza A/H17N10 polymerase bound to four heptad repeats of serine 5 phosphorylated Pol II CTD | X-RAY DIFFRACTION | 2.5 | 16 |
| 2 | 6EVK|1|V+6EVK|1|R | Crystal structure of bat influenza A/H17N10 polymerase with viral RNA promoter and cap analogue m7GTP | X-RAY DIFFRACTION | 2.9 | 16 |
| 3 | 6EVJ|1|V+6EVJ|1|R | Crystal structure of bat influenza A/H17N10 polymerase with viral RNA promoter and capped RNA primer | X-RAY DIFFRACTION | 3.9 | 15 |
| 4 | 6EVJ|1|U+6EVJ|1|S | Crystal structure of bat influenza A/H17N10 polymerase with viral RNA promoter and capped RNA primer | X-RAY DIFFRACTION | 3.9 | 15 |