#IFECompound(s)RNA source organismTitleMethodResolutionDate
14V9B|1|AC (rep)TRNA-FMET, MRNAThermus thermophilusCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.12014-07-09
24V5M|1|AVTRNA, MRNAThermus thermophilustRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)ELECTRON MICROSCOPY7.82014-07-09
34V95|1|AVP-site fMet-tRNA, mRNAThermus thermophilusCrystal structure of YAEJ bound to the 70S ribosomeX-RAY DIFFRACTION3.22014-07-09
44V8X|1|CVtransfer RNA, BACTERIAL TOXIN YOEBThermus thermophilusStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.352014-07-09
54V9A|1|ACTRNA-FMET, MRNAThermus thermophilusCrystal Structure of the 70S ribosome with tetracycline.X-RAY DIFFRACTION3.32014-07-09
64V5N|1|AVTRNA, MRNAThermus thermophilustRNA translocation on the 70S ribosome: the post- translocational translocation intermediate TI(POST)ELECTRON MICROSCOPY7.62014-07-09
74V9N|1|AWP-site tRNA-fMet, messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')Thermus thermophilusCrystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.X-RAY DIFFRACTION3.42014-07-09
84V9N|1|CWP-site tRNA-fMet, messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')Thermus thermophilusCrystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.X-RAY DIFFRACTION3.42014-07-09
94V8X|1|AVtransfer RNA, 5'-R(*GP*GP*CP*AP*AP*GP*GP*AP*GP*GP*UP*AP*AP*AP *AP*AP*UP*G U2M A2M A2MP*AP*AP*AP*A)-3'Thermus thermophilusStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.352014-07-09
104V7J|1|AvRNA (77-MER), RNA (5'-R(*GP*GP*CP*AP*AP*GP*GP*AP*GP*GP*UP*A*AP*AP*AP*AP*UP*GP*(OMU)P*(A2M)P*(OMG)P*AP*AP*AP*A)-3')Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.32014-07-09
114V7J|1|BvRNA (77-MER), RNA (5'-R(*GP*GP*CP*AP*AP*GP*GP*AP*GP*GP*UP*A*AP*AP*AP*AP*UP*GP*(OMU)P*(A2M)P*(OMG)P*AP*AP*AP*A)-3')Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.32014-07-09
124V9B|1|CCTRNA-FMET, MRNAThermus thermophilusCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.12014-07-09
134V95|1|CVP-site fMet-tRNA, mRNAThermus thermophilusCrystal structure of YAEJ bound to the 70S ribosomeX-RAY DIFFRACTION3.22014-07-09
144V7K|1|BvRNA (77-MER), RNA (5'-R(*A*AP*GP*UP*AP*AP*AP*AP*AP*UP*GP*UP*A*(CCC))-3')Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.62014-07-09
154WT8|1|C4P site trNA, mRNAThermus thermophilusCrystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-RAY DIFFRACTION3.42015-01-21
164V9A|1|CCTRNA-FMET, MRNAThermus thermophilusCrystal Structure of the 70S ribosome with tetracycline.X-RAY DIFFRACTION3.32014-07-09
174L47|1|QVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Thermus thermophilusCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION3.222014-08-06
184L47|1|XVP-site tRNA fMet, messenger RNA, A-site ASL SufA6Thermus thermophilusCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION3.222014-08-06
194V68|1|AVP-SITE TRNA, SYNTHETIC MRNAThermus thermophilusT. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.ELECTRON MICROSCOPY6.42014-07-09
204V7K|1|AvRNA (77-MER), RNA (5'-R(*A*AP*GP*UP*AP*AP*AP*AP*AP*UP*GP*UP*A*(CCC))-3')Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.62014-07-09
214V8U|1|AWRNAThermus thermophilusCrystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-RAY DIFFRACTION3.72014-07-09
224V8U|1|CWRNAThermus thermophilusCrystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-RAY DIFFRACTION3.72014-07-09
234V4J|1|zP-site tRNAfMET, MRNAThermus thermophilusInteractions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome.X-RAY DIFFRACTION3.832014-07-09
244V9B|1|ADTRNA-FMETThermus thermophilusCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.12014-07-09
254V7K|1|BwRNA (77-MER)Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.62014-07-09
264V8X|1|CWtransfer RNAThermus thermophilusStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.352014-07-09
274V5A|1|AWTRNA-FMETEscherichia coliStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.52014-07-09
284V7K|1|AwRNA (77-MER)Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.62014-07-09
294V8X|1|AWtransfer RNAThermus thermophilusStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.352014-07-09
304V7J|1|BwRNA (77-MER)Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.32014-07-09
314V7J|1|AwRNA (77-MER)Thermus thermophilusStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.32014-07-09
324V5A|1|CWTRNA-FMETEscherichia coliStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.52014-07-09
334V9B|1|CDTRNA-FMETThermus thermophilusCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.12014-07-09

Release history

Release2.72.82.92.102.112.122.132.142.152.162.172.182.192.202.212.222.232.242.252.262.272.282.29
Date2015-01-232015-01-302015-02-062015-02-132015-02-202015-02-272015-03-062015-03-132015-03-202015-03-272015-04-032015-04-102015-04-172015-04-242015-05-012015-05-082015-05-152015-05-222015-05-292015-06-052015-06-122015-06-192015-06-26

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_20721.2NR_20.0_20721.32.30(33) 4V9B|1|CC, 4V9N|1|AW, 4WT8|1|C4, 4L47|1|QV, 4V4J|1|z, 4V5A|1|CW, 4V5N|1|AV, 4V7J|1|Av, 4V7J|1|Bv, 4V7K|1|Av, 4V7K|1|Bv, 4V8U|1|AW, 4V8X|1|AV, 4V8X|1|CV, 4V95|1|AV, 4V9A|1|AC, 4V9B|1|AC, 4V9B|1|AD, 4V9B|1|CD, 4V9N|1|CW, 4L47|1|XV, 4V5A|1|AW, 4V5M|1|AV, 4V68|1|AV, 4V7J|1|Aw, 4V7J|1|Bw, 4V7K|1|Aw, 4V7K|1|Bw, 4V8U|1|CW, 4V8X|1|AW, 4V8X|1|CW, 4V95|1|CV, 4V9A|1|CC(0) (2) 3JA1|1|S2, 3J9Z|1|S6
NR_all_20721.2NR_3.5_20721.32.30(23) 4V9A|1|CC, 4V8X|1|AV, 4V8X|1|AW, 4V9B|1|AC, 4V9B|1|AD, 4V8X|1|CV, 4V9N|1|AW, 4V8X|1|CW, 4V9B|1|CC, 4V9N|1|CW, 4V9B|1|CD, 4V95|1|AV, 4WT8|1|C4, 4V95|1|CV, 4V7J|1|Bv, 4V7J|1|Bw, 4V9A|1|AC, 4V7J|1|Aw, 4L47|1|QV, 4L47|1|XV, 4V5A|1|AW, 4V5A|1|CW, 4V7J|1|Av(10) 4V5M|1|AV, 4V68|1|AV, 4V7K|1|Aw, 4V7K|1|Bw, 4V8U|1|CW, 4V5N|1|AV, 4V7K|1|Bv, 4V4J|1|z, 4V7K|1|Av, 4V8U|1|AW(0)
NR_all_20721.2NR_4.0_20721.32.30(30) 4V9B|1|CD, 4V8U|1|AW, 4V4J|1|z, 4V9N|1|AW, 4V8U|1|CW, 4V9N|1|CW, 4V5A|1|AW, 4V8X|1|AV, 4V8X|1|CV, 4V5A|1|CW, 4WT8|1|C4, 4V8X|1|AW, 4V8X|1|CW, 4V7J|1|Av, 4V95|1|AV, 4V7J|1|Aw, 4V95|1|CV, 4V7J|1|Bv, 4V9A|1|AC, 4V7J|1|Bw, 4V9A|1|CC, 4V7K|1|Av, 4V9B|1|AC, 4V7K|1|Aw, 4V9B|1|AD, 4V7K|1|Bv, 4L47|1|QV, 4V9B|1|CC, 4V7K|1|Bw, 4L47|1|XV(3) 4V5N|1|AV, 4V68|1|AV, 4V5M|1|AV(2) 3JA1|1|S2, 3J9Z|1|S6
NR_all_20721.2NR_all_20721.32.30(33) 4V9A|1|AC, 4V9B|1|AC, 4L47|1|QV, 4V4J|1|z, 4V5A|1|CW, 4V5N|1|AV, 4V7J|1|Av, 4V7J|1|Bv, 4V7K|1|Av, 4V7K|1|Bv, 4V8U|1|AW, 4V8X|1|AV, 4V8X|1|CV, 4V95|1|AV, 4V9B|1|CC, 4V9N|1|AW, 4WT8|1|C4, 4V95|1|CV, 4V9A|1|CC, 4V9B|1|AD, 4L47|1|XV, 4V5A|1|AW, 4V5M|1|AV, 4V68|1|AV, 4V7J|1|Aw, 4V7J|1|Bw, 4V7K|1|Aw, 4V7K|1|Bw, 4V8U|1|CW, 4V8X|1|AW, 4V8X|1|CW, 4V9B|1|CD, 4V9N|1|CW(0) (2) 3J9Z|1|S6, 3JA1|1|S2

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength