#IFECompound(s)RNA source organismTitleMethodResolutionDate
14KZY|1|i (rep)18S Ribosomal RNAOryctolagus cuniculusRabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.X-RAY DIFFRACTION7.012013-07-24
24KZZ|1|i18S Ribosomal RNAOryctolagus cuniculusRabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1AX-RAY DIFFRACTION7.032013-07-24
34KZX|1|i18S ribosomal RNAOryctolagus cuniculusRabbit 40S ribosomal subunit in complex with eIF1.X-RAY DIFFRACTION7.812013-07-24
46R5Q|1|K18S ribosomal RNAOryctolagus cuniculusStructure of XBP1u-paused ribosome nascent chain complex (post-state)ELECTRON MICROSCOPY32019-07-10
56P5I|1|218S rRNAOryctolagus cuniculusStructure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 1)ELECTRON MICROSCOPY3.12019-09-18
66P5K|1|218S rRNAOryctolagus cuniculusStructure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 3)ELECTRON MICROSCOPY3.12019-09-18
76P5J|1|218S rRNAOryctolagus cuniculusStructure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 2)ELECTRON MICROSCOPY3.12019-09-18
86P4G|1|218S rRNAOryctolagus cuniculusStructure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Virus IRES (Class 1)ELECTRON MICROSCOPY3.12019-09-18
96R6P|1|K18S rRNAOryctolagus cuniculusStructure of XBP1u-paused ribosome nascent chain complex (rotated state)ELECTRON MICROSCOPY3.12019-07-10
106P4H|1|218S rRNAOryctolagus cuniculusStructure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Virus IRES (Class 2)ELECTRON MICROSCOPY3.22019-09-18
116P5N|1|218S rRNAOryctolagus cuniculusStructure of a mammalian 80S ribosome in complex with a single translocated Israeli Acute Paralysis Virus IRES and eRF1ELECTRON MICROSCOPY3.22019-09-25
126D9J|1|218S rRNAOryctolagus cuniculusMammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.ELECTRON MICROSCOPY3.22018-06-06
135LZS|1|918S ribosomal RNAOryctolagus cuniculusStructure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin BELECTRON MICROSCOPY3.312016-11-30
141VX5|1|218S ribosomal RNAStructure of the 80S mammalian ribosome bound to eEF2. This entry contains the small ribosomal subunit.ELECTRON MICROSCOPY3.52014-06-18
153J74|1|S218S ribosomal RNAStructure of the 80S mammalian ribosome bound to eEF2ELECTRON MICROSCOPY3.52014-06-18
166MTD|1|918S rRNAOryctolagus cuniculusRabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)ELECTRON MICROSCOPY3.32018-11-21
175LZV|1|918S ribosomal RNAOryctolagus cuniculusStructure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.ELECTRON MICROSCOPY3.352016-11-30
186D90|1|218S rRNAOryctolagus cuniculusMammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.ELECTRON MICROSCOPY3.22018-06-06
196MTC|1|918S rRNAOryctolagus cuniculusRabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)ELECTRON MICROSCOPY3.42018-11-21
206MTE|1|918S rRNAOryctolagus cuniculusRabbit 80S ribosome with eEF2 and SERBP1 (rotated state)ELECTRON MICROSCOPY3.42018-11-21
216GZ5|1|B118S ribosomal RNAOryctolagus cuniculustRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)ELECTRON MICROSCOPY3.52018-12-05
225LZZ|1|918S ribosomal RNAOryctolagus cuniculusStructure of the mammalian rescue complex with Pelota and Hbs1l (combined)ELECTRON MICROSCOPY3.472016-11-30
235LZW|1|918S ribosomal RNAOryctolagus cuniculusStructure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.ELECTRON MICROSCOPY3.532016-11-30
245LZX|1|918S ribosomal RNAOryctolagus cuniculusStructure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.ELECTRON MICROSCOPY3.672016-11-30
256GZ3|1|B118S ribosomal RNAOryctolagus cuniculustRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)ELECTRON MICROSCOPY3.62018-12-05
266GZ4|1|B118S ribosomal RNAOryctolagus cuniculustRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)ELECTRON MICROSCOPY3.62018-12-05
275LZT|1|918S ribosomal RNAOryctolagus cuniculusStructure of the mammalian ribosomal termination complex with eRF1 and eRF3.ELECTRON MICROSCOPY3.652016-11-30
286MTB|1|918S rRNAOryctolagus cuniculusRabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)ELECTRON MICROSCOPY3.62018-11-21
296HCJ|1|A218S ribosomal RNAOryctolagus cuniculusStructure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAsELECTRON MICROSCOPY3.82018-10-17
301VX2|1|218S ribosomal RNAStructure of the translating mammalian ribosome-Sec61 complex. This entry contains the small ribosomal subunit.ELECTRON MICROSCOPY3.92014-06-18
313J73|1|S218S ribosomal RNAStructure of the translating mammalian ribosome-Sec61 complexELECTRON MICROSCOPY3.92014-06-18
326R6G|1|K18S ribosomal RNAOryctolagus cuniculusStructure of XBP1u-paused ribosome nascent chain complex with SRP.ELECTRON MICROSCOPY3.72019-07-10
335LZU|1|918S ribosomal RNAOryctolagus cuniculusStructure of the mammalian ribosomal termination complex with accommodated eRF1ELECTRON MICROSCOPY3.752016-11-30
346HCF|1|A118S ribosomal RNAOryctolagus cuniculusStructure of the rabbit 80S ribosome stalled on globin mRNA at the stop codonELECTRON MICROSCOPY3.92018-10-17
356R7Q|1|K18S ribosomal RNAOryctolagus cuniculusStructure of XBP1u-paused ribosome nascent chain complex with Sec61.ELECTRON MICROSCOPY3.92019-07-10
363JAH|1|918S ribosomal RNAOryctolagus cuniculusStructure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codonELECTRON MICROSCOPY3.452015-08-12
375LZY|1|918S ribosomal RNAOryctolagus cuniculusStructure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.ELECTRON MICROSCOPY3.992016-11-30
385FLX|1|118S RRNAOryctolagus cuniculusMammalian 40S HCV-IRES complexELECTRON MICROSCOPY3.92015-12-23
393JAG|1|918S ribosomal RNAOryctolagus cuniculusStructure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codonELECTRON MICROSCOPY3.652015-08-12
403JAI|1|918S ribosomal RNAOryctolagus cuniculusStructure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codonELECTRON MICROSCOPY3.652015-08-12
415K0Y|1|A18S ribosomal RNAOryctolagus cuniculusm48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 ternary complex and eIF3 i and g subunits relocated to the intersubunit faceELECTRON MICROSCOPY5.82016-07-13
426HCQ|1|A218S ribosomal RNAOryctolagus cuniculusStructure of the rabbit collided di-ribosome (collided monosome)ELECTRON MICROSCOPY6.52018-10-17
436HCM|1|A118S ribosomal RNAOryctolagus cuniculusStructure of the rabbit collided di-ribosome (stalled monosome)ELECTRON MICROSCOPY6.82018-10-17
444UJE|1|B118S Ribosomal RNAOryctolagus cuniculusRegulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangementELECTRON MICROSCOPY6.92014-07-16
453JAN|1|S218S ribosomal RNAOryctolagus cuniculusStructure of the scanning state of the mammalian SRP-ribosome complexELECTRON MICROSCOPY3.752015-08-05
463JAJ|1|S218S ribosomal RNAOryctolagus cuniculusStructure of the engaged state of the mammalian SRP-ribosome complexELECTRON MICROSCOPY3.752015-08-05
474UJD|1|C118S Ribosomal RNAOryctolagus cuniculusmammalian 80S HCV-IRES initiation complex with eIF5B PRE-like stateELECTRON MICROSCOPY8.92014-07-30
484D61|1|118S RRNAOryctolagus cuniculusCryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated stateELECTRON MICROSCOPY92015-03-04
494D5L|1|118S RRNA 2Oryctolagus cuniculusCryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated stateELECTRON MICROSCOPY92015-02-04
504UJC|1|C118S RIBOSOMAL RNAOryctolagus cuniculusmammalian 80S HCV-IRES initiation complex with eIF5B POST-like stateELECTRON MICROSCOPY9.52014-07-30

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14UJD|1|C1mammalian 80S HCV-IRES initiation complex with eIF5B PRE-like stateELECTRON MICROSCOPY8.91742
24UJC|1|C1mammalian 80S HCV-IRES initiation complex with eIF5B POST-like stateELECTRON MICROSCOPY9.51742
34D5L|1|1Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated stateELECTRON MICROSCOPY91742
44D61|1|1Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated stateELECTRON MICROSCOPY91742
54UJE|1|B1Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangementELECTRON MICROSCOPY6.91742
65K0Y|1|Am48S late-stage initiation complex, purified from rabbit reticulocytes lysates, displaying eIF2 ternary complex and eIF3 i and g subunits relocated to the intersubunit faceELECTRON MICROSCOPY5.81776
74KZX|1|iRabbit 40S ribosomal subunit in complex with eIF1.X-RAY DIFFRACTION7.811797
84KZY|1|iRabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.X-RAY DIFFRACTION7.011840
94KZZ|1|iRabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1AX-RAY DIFFRACTION7.031797
103JAN|1|S2Structure of the scanning state of the mammalian SRP-ribosome complexELECTRON MICROSCOPY3.751742
113JAJ|1|S2Structure of the engaged state of the mammalian SRP-ribosome complexELECTRON MICROSCOPY3.751742
123JAI|1|9Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codonELECTRON MICROSCOPY3.651719
133JAG|1|9Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAA stop codonELECTRON MICROSCOPY3.651719
143JAH|1|9Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codonELECTRON MICROSCOPY3.451719
156GZ5|1|B1tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)ELECTRON MICROSCOPY3.51708
166HCQ|1|A2Structure of the rabbit collided di-ribosome (collided monosome)ELECTRON MICROSCOPY6.51740
176HCJ|1|A2Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAsELECTRON MICROSCOPY3.81740
186HCF|1|A1Structure of the rabbit 80S ribosome stalled on globin mRNA at the stop codonELECTRON MICROSCOPY3.91732
196HCM|1|A1Structure of the rabbit collided di-ribosome (stalled monosome)ELECTRON MICROSCOPY6.81732
206D90|1|2Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.ELECTRON MICROSCOPY3.21697
216P5N|1|2Structure of a mammalian 80S ribosome in complex with a single translocated Israeli Acute Paralysis Virus IRES and eRF1ELECTRON MICROSCOPY3.21697
225LZY|1|9Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.ELECTRON MICROSCOPY3.991698
235LZZ|1|9Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)ELECTRON MICROSCOPY3.471698
245LZX|1|9Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.ELECTRON MICROSCOPY3.671698
255LZW|1|9Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.ELECTRON MICROSCOPY3.531698
265LZT|1|9Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.ELECTRON MICROSCOPY3.651698
275LZU|1|9Structure of the mammalian ribosomal termination complex with accommodated eRF1ELECTRON MICROSCOPY3.751698
285LZV|1|9Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.ELECTRON MICROSCOPY3.351698
295LZS|1|9Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin BELECTRON MICROSCOPY3.311697
306MTB|1|9Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)ELECTRON MICROSCOPY3.61664
316MTC|1|9Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)ELECTRON MICROSCOPY3.41664
326R7Q|1|KStructure of XBP1u-paused ribosome nascent chain complex with Sec61.ELECTRON MICROSCOPY3.91698
336R5Q|1|KStructure of XBP1u-paused ribosome nascent chain complex (post-state)ELECTRON MICROSCOPY31698
346R6G|1|KStructure of XBP1u-paused ribosome nascent chain complex with SRP.ELECTRON MICROSCOPY3.71698
356R6P|1|KStructure of XBP1u-paused ribosome nascent chain complex (rotated state)ELECTRON MICROSCOPY3.11698
366P4H|1|2Structure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Virus IRES (Class 2)ELECTRON MICROSCOPY3.21697
376P4G|1|2Structure of a mammalian small ribosomal subunit in complex with the Israeli Acute Paralysis Virus IRES (Class 1)ELECTRON MICROSCOPY3.11697
386P5K|1|2Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 3)ELECTRON MICROSCOPY3.11697
396P5I|1|2Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 1)ELECTRON MICROSCOPY3.11697
406P5J|1|2Structure of a mammalian 80S ribosome in complex with the Israeli Acute Paralysis Virus IRES (Class 2)ELECTRON MICROSCOPY3.11697
416MTE|1|9Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)ELECTRON MICROSCOPY3.41664
426MTD|1|9Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)ELECTRON MICROSCOPY3.31692
436GZ4|1|B1tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)ELECTRON MICROSCOPY3.61708
446GZ3|1|B1tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-1 (TI-POST-1)ELECTRON MICROSCOPY3.61708
455FLX|1|1Mammalian 40S HCV-IRES complexELECTRON MICROSCOPY3.91708
466D9J|1|2Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.ELECTRON MICROSCOPY3.21697
473J74|1|S2Structure of the 80S mammalian ribosome bound to eEF2ELECTRON MICROSCOPY3.51742
481VX5|1|2Structure of the 80S mammalian ribosome bound to eEF2. This entry contains the small ribosomal subunit.ELECTRON MICROSCOPY3.51742
491VX2|1|2Structure of the translating mammalian ribosome-Sec61 complex. This entry contains the small ribosomal subunit.ELECTRON MICROSCOPY3.91742
503J73|1|S2Structure of the translating mammalian ribosome-Sec61 complexELECTRON MICROSCOPY3.91742