BGSU RNA Site //

Equivalence class NR_all_24610.1 Obsolete

#IFEStandardized nameMoleculeOrganismDomainRfamTitleMethodÅDate
17NSH|1|BA (rep)Large subunit ribosomal RNA16S rRNASus scrofaMitochondriaRF0254139S mammalian mitochondrial large ribosomal subunit with mtRRF (post) and mtEFG2ELECTRON MICROSCOPY3.22021-05-05
26GAW|1|BALarge subunit ribosomal RNA16S ribosomal RNA, mitochondrialSus scrofaMitochondriaRF02541Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.ELECTRON MICROSCOPY3.22018-08-22
36GB2|1|BALarge subunit ribosomal RNA16S ribosomal RNA, mitochondrialSus scrofaMitochondriaRF02541Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 39S ribosomal subunit.ELECTRON MICROSCOPY3.22018-08-08
47NQL|1|BALarge subunit ribosomal RNA16S rRNASus scrofaMitochondriaRF0254155S mammalian mitochondrial ribosome with ICT1 and P site tRNAMetELECTRON MICROSCOPY3.42021-05-05
57NQH|1|BALarge subunit ribosomal RNA16S rRNASus scrofaMitochondriaRF0254155S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMetELECTRON MICROSCOPY3.52021-05-05
64V19|1|ALarge subunit ribosomal RNAMITORIBOSOMAL 16S RRNA, TRNASus scrofaMitochondriaRF02541Structure of the large subunit of the mammalian mitoribosome, part 1 of 2ELECTRON MICROSCOPY3.42014-10-08
75AJ4|1|BALarge subunit ribosomal RNAMITORIBOSOMAL 16S Ribosomal RNASus scrofaMitochondriaRF02541Structure of the 55S mammalian mitoribosome.ELECTRON MICROSCOPY3.82015-04-22
84CE4|1|ALarge subunit ribosomal RNA16S Ribosomal RNASus scrofaMitochondriaRF0254139S large subunit of the porcine mitochondrial ribosomeELECTRON MICROSCOPY4.92013-12-18

Release history

Release3.1773.1783.1793.180
Date2021-05-052021-05-122021-05-192021-05-26

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_24610.1NR_all_06715.43.177(5) 6GB2|1|BA, 6GAW|1|BA, 5AJ4|1|BA, 4V19|1|A, 4CE4|1|A(3) 7NQH|1|BA, 7NSH|1|BA, 7NQL|1|BA(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_24610.1NR_all_24610.23.181(8) 7NQL|1|BA, 7NQH|1|BA, 6GB2|1|BA, 6GAW|1|BA, 5AJ4|1|BA, 4V19|1|A, 4CE4|1|A, 7NSH|1|BA(0) (2) 7NSJ|1|BA, 7NSI|1|BA

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17NSH|1|BA39S mammalian mitochondrial large ribosomal subunit with mtRRF (post) and mtEFG2ELECTRON MICROSCOPY3.21544
27NQL|1|BA55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMetELECTRON MICROSCOPY3.41544
37NQH|1|BA55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMetELECTRON MICROSCOPY3.51544
46GAW|1|BAUnique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the complete 55S ribosome.ELECTRON MICROSCOPY3.21549
56GB2|1|BAUnique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 39S ribosomal subunit.ELECTRON MICROSCOPY3.21549
65AJ4|1|BAStructure of the 55S mammalian mitoribosome.ELECTRON MICROSCOPY3.81515
74V19|1|AStructure of the large subunit of the mammalian mitoribosome, part 1 of 2ELECTRON MICROSCOPY3.41515
84CE4|1|A39S large subunit of the porcine mitochondrial ribosomeELECTRON MICROSCOPY4.91437