#IFECompound(s)RNA source organismTitleMethodResolutionDate
11IL2|1|C (rep)ASPARTYL TRANSFER RNASaccharomyces cerevisiaeCrystal Structure of the E. coli Aspartyl-tRNA Synthetase:Yeast tRNAasp:aspartyl-Adenylate ComplexX-RAY DIFFRACTION2.62001-09-28
21IL2|1|DASPARTYL TRANSFER RNASaccharomyces cerevisiaeCrystal Structure of the E. coli Aspartyl-tRNA Synthetase:Yeast tRNAasp:aspartyl-Adenylate ComplexX-RAY DIFFRACTION2.62001-09-28
32TRA|1|ATRNAASPSaccharomyces cerevisiaeRESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALSX-RAY DIFFRACTION31987-11-06
43TRA|1|ATRNAASPSaccharomyces cerevisiaeRESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALSX-RAY DIFFRACTION31987-11-06
51ASZ|1|ST-RNA (75-MER)THE ACTIVE SITE OF YEAST ASPARTYL-TRNA SYNTHETASE: STRUCTURAL AND FUNCTIONAL ASPECTS OF THE AMINOACYLATION REACTIONX-RAY DIFFRACTION31995-05-08
61ASY|1|ST-RNA (75-MER)CLASS II AMINOACYL TRANSFER RNA SYNTHETASES: CRYSTAL STRUCTURE OF YEAST ASPARTYL-TRNA SYNTHETASE COMPLEXED WITH TRNA ASPX-RAY DIFFRACTION2.91995-05-08
71ASZ|1|RT-RNA (75-MER)THE ACTIVE SITE OF YEAST ASPARTYL-TRNA SYNTHETASE: STRUCTURAL AND FUNCTIONAL ASPECTS OF THE AMINOACYLATION REACTIONX-RAY DIFFRACTION31995-05-08
81ASY|1|RT-RNA (75-MER)CLASS II AMINOACYL TRANSFER RNA SYNTHETASES: CRYSTAL STRUCTURE OF YEAST ASPARTYL-TRNA SYNTHETASE COMPLEXED WITH TRNA ASPX-RAY DIFFRACTION2.91995-05-08
91VTQ|1|AT-RNA-ASPsynthetic constructTHREE-DIMENSIONAL STRUCTURE OF YEAST T-RNA-ASP. I. STRUCTURE DETERMINATIONX-RAY DIFFRACTION32011-07-13
103J16|1|LP-site tRNASaccharomyces cerevisiaeModels of ribosome-bound Dom34p and Rli1p and their ribosomal binding partnersELECTRON MICROSCOPY7.22012-02-22
113IZ7|1|BP-site tRNA-Asp, mRNA (AAAA-GAC-UUCA)Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosomeELECTRON MICROSCOPY5.52010-12-01
124V6I|1|CBP-SITE TRNA ASP, MRNA, RNA (5'-R(P*AP*AP*AP*AP*GP*AP*CP*UP*UP*CP*A)-3')Saccharomyces cerevisiaeLocalization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosomeELECTRON MICROSCOPY8.82014-07-09

Release history

Release3.03.13.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.95
Date2017-12-152017-12-222017-12-292018-01-052018-01-122018-01-192018-01-262018-02-022018-02-092018-02-162018-02-232018-03-012018-03-082018-03-152018-03-222018-03-292018-04-062018-04-132018-04-202018-04-272018-05-042018-05-112018-05-182018-05-252018-06-012018-06-082018-06-152018-06-222018-06-292018-07-062018-07-132018-07-202018-07-272018-08-032018-08-102018-08-172018-08-242018-08-312018-09-072018-09-142018-09-212018-09-282018-10-052018-10-122018-10-192018-10-262018-11-022018-11-092018-11-162018-11-232018-11-302018-12-072018-12-142018-12-212018-12-282019-01-042019-01-112019-01-182019-01-252019-02-012019-02-082019-02-152019-02-222019-03-012019-03-082019-03-152019-03-222019-03-292019-04-052019-04-122019-04-192019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-09

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_24819.2NR_all_24819.13.0(11) 4V6I|1|CB, 3TRA|1|A, 3J16|1|L, 2TRA|1|A, 1VTQ|1|A, 1IL2|1|D, 1IL2|1|C, 1ASZ|1|S, 1ASZ|1|R, 1ASY|1|S, 1ASY|1|R(1) 3IZ7|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14V6I|1|CBLocalization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosomeELECTRON MICROSCOPY8.875
23IZ7|1|BModel of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosomeELECTRON MICROSCOPY5.575
33J16|1|LModels of ribosome-bound Dom34p and Rli1p and their ribosomal binding partnersELECTRON MICROSCOPY7.275
41IL2|1|CCrystal Structure of the E. coli Aspartyl-tRNA Synthetase:Yeast tRNAasp:aspartyl-Adenylate ComplexX-RAY DIFFRACTION2.667
51ASY|1|RCLASS II AMINOACYL TRANSFER RNA SYNTHETASES: CRYSTAL STRUCTURE OF YEAST ASPARTYL-TRNA SYNTHETASE COMPLEXED WITH TRNA ASPX-RAY DIFFRACTION2.967
61ASZ|1|RTHE ACTIVE SITE OF YEAST ASPARTYL-TRNA SYNTHETASE: STRUCTURAL AND FUNCTIONAL ASPECTS OF THE AMINOACYLATION REACTIONX-RAY DIFFRACTION367
71ASZ|1|STHE ACTIVE SITE OF YEAST ASPARTYL-TRNA SYNTHETASE: STRUCTURAL AND FUNCTIONAL ASPECTS OF THE AMINOACYLATION REACTIONX-RAY DIFFRACTION367
81ASY|1|SCLASS II AMINOACYL TRANSFER RNA SYNTHETASES: CRYSTAL STRUCTURE OF YEAST ASPARTYL-TRNA SYNTHETASE COMPLEXED WITH TRNA ASPX-RAY DIFFRACTION2.967
91IL2|1|DCrystal Structure of the E. coli Aspartyl-tRNA Synthetase:Yeast tRNAasp:aspartyl-Adenylate ComplexX-RAY DIFFRACTION2.662
102TRA|1|ARESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALSX-RAY DIFFRACTION370
113TRA|1|ARESTRAINED REFINEMENT OF TWO CRYSTALLINE FORMS OF YEAST ASPARTIC ACID AND PHENYLALANINE TRANSFER RNA CRYSTALSX-RAY DIFFRACTION364
121VTQ|1|ATHREE-DIMENSIONAL STRUCTURE OF YEAST T-RNA-ASP. I. STRUCTURE DETERMINATIONX-RAY DIFFRACTION367