Equivalence class NR_all_24979.1 Obsolete
| # | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
|---|---|---|---|---|---|---|---|
| 1 | 6QYZ|1|A (rep) | the prohead RNA (71-MER) in bacteriophage phi29 | Bacillus virus phi29 | The cryo-EM structure of prohead RNA in bacteriophage phi29 prohead | ELECTRON MICROSCOPY | 4.6 | 2019-06-12 |
| 2 | 6QYZ|1|D | the prohead RNA (71-MER) in bacteriophage phi29 | Bacillus virus phi29 | The cryo-EM structure of prohead RNA in bacteriophage phi29 prohead | ELECTRON MICROSCOPY | 4.6 | 2019-06-12 |
| 3 | 6QYZ|1|E | the prohead RNA (71-MER) in bacteriophage phi29 | Bacillus virus phi29 | The cryo-EM structure of prohead RNA in bacteriophage phi29 prohead | ELECTRON MICROSCOPY | 4.6 | 2019-06-12 |
| 4 | 6QYZ|1|B | the prohead RNA (71-MER) in bacteriophage phi29 | Bacillus virus phi29 | The cryo-EM structure of prohead RNA in bacteriophage phi29 prohead | ELECTRON MICROSCOPY | 4.6 | 2019-06-12 |
| 5 | 6QYZ|1|C | the prohead RNA (71-MER) in bacteriophage phi29 | Bacillus virus phi29 | The cryo-EM structure of prohead RNA in bacteriophage phi29 prohead | ELECTRON MICROSCOPY | 4.6 | 2019-06-12 |
| 6 | 1FOQ|1|B | BACTERIOPHAGE PHI29 PROHEAD RNA | Bacillus virus phi29 | PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA | ELECTRON MICROSCOPY | 20 | 2000-12-22 |
| 7 | 1FOQ|1|A | BACTERIOPHAGE PHI29 PROHEAD RNA | Bacillus virus phi29 | PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA | ELECTRON MICROSCOPY | 20 | 2000-12-22 |
| 8 | 1FOQ|1|C | BACTERIOPHAGE PHI29 PROHEAD RNA | Bacillus virus phi29 | PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA | ELECTRON MICROSCOPY | 20 | 2000-12-22 |
| 9 | 1FOQ|1|E | BACTERIOPHAGE PHI29 PROHEAD RNA | Bacillus virus phi29 | PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA | ELECTRON MICROSCOPY | 20 | 2000-12-22 |
| 10 | 1FOQ|1|D | BACTERIOPHAGE PHI29 PROHEAD RNA | Bacillus virus phi29 | PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA | ELECTRON MICROSCOPY | 20 | 2000-12-22 |
Release history
| Release | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2019-06-14 | 2019-06-21 | 2019-06-28 | 2019-07-05 | 2019-07-12 | 2019-07-19 | 2019-07-26 | 2019-08-02 | 2019-08-09 | 2019-08-16 | 2019-08-23 | 2019-08-28 | 2019-09-04 | 2019-09-11 | 2019-09-19 | 2019-09-25 | 2019-10-03 | 2019-10-09 | 2019-10-16 | 2019-10-23 | 2019-10-30 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_24979.1 | NR_all_27833.1 | 3.99 | (5) 1FOQ|1|A, 1FOQ|1|E, 1FOQ|1|C, 1FOQ|1|B, 1FOQ|1|D | (5) 6QYZ|1|E, 6QYZ|1|A, 6QYZ|1|D, 6QYZ|1|B, 6QYZ|1|C | (0) |
| NR_all_24979.1 | NR_all_58737.1 | 3.99 | (5) 6QYZ|1|C, 6QYZ|1|A, 6QYZ|1|E, 6QYZ|1|B, 6QYZ|1|D | (5) 1FOQ|1|B, 1FOQ|1|E, 1FOQ|1|A, 1FOQ|1|D, 1FOQ|1|C | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 1FOQ|1|D | PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA | ELECTRON MICROSCOPY | 20 | 109 |
| 2 | 1FOQ|1|C | PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA | ELECTRON MICROSCOPY | 20 | 109 |
| 3 | 1FOQ|1|B | PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA | ELECTRON MICROSCOPY | 20 | 109 |
| 4 | 1FOQ|1|A | PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA | ELECTRON MICROSCOPY | 20 | 109 |
| 5 | 1FOQ|1|E | PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA | ELECTRON MICROSCOPY | 20 | 109 |
| 6 | 6QYZ|1|B | The cryo-EM structure of prohead RNA in bacteriophage phi29 prohead | ELECTRON MICROSCOPY | 4.6 | 69 |
| 7 | 6QYZ|1|C | The cryo-EM structure of prohead RNA in bacteriophage phi29 prohead | ELECTRON MICROSCOPY | 4.6 | 69 |
| 8 | 6QYZ|1|A | The cryo-EM structure of prohead RNA in bacteriophage phi29 prohead | ELECTRON MICROSCOPY | 4.6 | 69 |
| 9 | 6QYZ|1|D | The cryo-EM structure of prohead RNA in bacteriophage phi29 prohead | ELECTRON MICROSCOPY | 4.6 | 69 |
| 10 | 6QYZ|1|E | The cryo-EM structure of prohead RNA in bacteriophage phi29 prohead | ELECTRON MICROSCOPY | 4.6 | 69 |