Equivalence class NR_all_26825.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7ZQ6|1|M (rep) | Transfer RNA | Gly-tRNA | Escherichia coli | Bacteria | RF00005 | 70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain | Electron microscopy | 2.75 | 2022-08-10 |
| 2 | 6OM6|1|5 | Transfer RNA | tRNA(gly), mRNA | Escherichia coli | Bacteria | RF00005 | Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA | Electron microscopy | 3.1 | 2021-02-10 |
| 3 | 3J46|1|p | Transfer RNA | P-tRNA | Escherichia coli | Bacteria | RF00005 | Structure of the SecY protein translocation channel in action | Electron microscopy | 10.1 | 2013-10-23 |
Release history
| Release | 3.243 | 3.244 | 3.245 | 3.246 | 3.247 | 3.248 | 3.249 | 3.250 | 3.251 | 3.252 | 3.253 | 3.254 | 3.255 | 3.256 | 3.257 | 3.258 | 3.259 | 3.260 | 3.261 | 3.262 | 3.263 | 3.264 | 3.265 | 3.266 | 3.267 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-08-10 | 2022-08-17 | 2022-08-24 | 2022-08-31 | 2022-09-07 | 2022-09-14 | 2022-09-21 | 2022-09-28 | 2022-10-05 | 2022-10-12 | 2022-10-19 | 2022-10-26 | 2022-11-02 | 2022-11-09 | 2022-11-16 | 2022-11-23 | 2022-11-30 | 2022-12-07 | 2022-12-14 | 2022-12-21 | 2022-12-28 | 2023-01-04 | 2023-01-11 | 2023-01-18 | 2023-01-25 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_26825.1 | NR_all_12156.1 | 3.243 | (1) 6OM6|1|5 | (2) 7ZQ6|1|M, 3J46|1|p | (0) |
| NR_all_26825.1 | NR_all_26520.1 | 3.243 | (1) 3J46|1|p | (2) 7ZQ6|1|M, 6OM6|1|5 | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 3J46|1|p | Structure of the SecY protein translocation channel in action | ELECTRON MICROSCOPY | 10.1 | 76 |
| 2 | 7ZQ6|1|M | 70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chain | ELECTRON MICROSCOPY | 2.75 | 76 |
| 3 | 6OM6|1|5 | Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNA | ELECTRON MICROSCOPY | 3.1 | 74 |