#IFECompound(s)RNA source organismTitleMethodResolutionDate
16BK8|1|5 (rep)U5 snRNA, RNA (34-MER)Saccharomyces cerevisiaeS. cerevisiae spliceosomal post-catalytic P complexELECTRON MICROSCOPY3.32018-02-21
25GMK|1|DU5 snRNA, 5'-ExonSaccharomyces cerevisiaeCryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolutionELECTRON MICROSCOPY3.42016-08-17
36EXN|1|5U5 snRNA, Ligated exons: UBC4 mRNASaccharomyces cerevisiaePost-catalytic P complex spliceosome with 3' splice site dockedELECTRON MICROSCOPY3.72018-01-17
45YLZ|1|BU5 snRNA, mRNA/intron lariat, U2 snRNASaccharomyces cerevisiaeCryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstromELECTRON MICROSCOPY3.62018-07-18
55LJ3|1|UU5 snRNA (small nuclear RNA), Exon 1 (5' exon) of UBC4 pre-mRNASaccharomyces cerevisiaeStructure of the core of the yeast spliceosome immediately after branchingELECTRON MICROSCOPY3.82016-08-03
65GAN|1|UU5 snRNASaccharomyces cerevisiaeThe overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 AngstromELECTRON MICROSCOPY3.72016-01-27
75MPS|1|5U5 snRNA, UBC4 gene exonSaccharomyces cerevisiaeStructure of a spliceosome remodeled for exon ligationELECTRON MICROSCOPY3.852017-01-18
85WSG|1|DU5 snRNA, 5'-exonSaccharomyces cerevisiaeCryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolutionELECTRON MICROSCOPY42017-01-25
95MQ0|1|5Saccharomyces cerevisiae strain WI_C_MBSP_4 chromosome VII sequence, 5'-EXON OF UBC4 PRE-MRNASaccharomyces cerevisiaeStructure of a spliceosome remodeled for exon ligationELECTRON MICROSCOPY4.172017-01-18
105GAM|1|UU5 snRNASaccharomyces cerevisiaeFoot region of the yeast spliceosomal U4/U6.U5 tri-snRNPELECTRON MICROSCOPY3.72016-02-03
113JCM|1|FSNR7-L snRNA, SNR6 snRNA, pre-mRNASaccharomyces cerevisiaeCryo-EM structure of the spliceosomal U4/U6.U5 tri-snRNPELECTRON MICROSCOPY3.82016-02-24
125LQW|1|5U5 snRNA, actin pre-mRNASaccharomyces cerevisiaeyeast activated spliceosomeELECTRON MICROSCOPY5.82016-10-05
135NRL|1|5U5 snRNASaccharomyces cerevisiaeStructure of a pre-catalytic spliceosomeELECTRON MICROSCOPY7.22017-05-31
145LJ5|1|UU5 snRNA (small nuclear RNA), Exon 1 (5' exon) of UBC4 pre-mRNASaccharomyces cerevisiaeOverall structure of the yeast spliceosome immediately after branching.ELECTRON MICROSCOPY102016-08-31

Release history

Release3.313.32
Date2018-07-202018-07-27

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_30457.8NR_all_30457.73.31(13) 6EXN|1|5, 6BK8|1|5, 5WSG|1|D, 5NRL|1|5, 5MQ0|1|5, 5MPS|1|5, 5LQW|1|5, 5LJ5|1|U, 5LJ3|1|U, 5GMK|1|D, 5GAN|1|U, 5GAM|1|U, 3JCM|1|F(1) 5YLZ|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_30457.8NR_all_30457.93.33(14) 5LQW|1|5, 5LJ5|1|U, 5LJ3|1|U, 5GMK|1|D, 5GAN|1|U, 5GAM|1|U, 3JCM|1|F, 6EXN|1|5, 6BK8|1|5, 5YLZ|1|B, 5WSG|1|D, 5NRL|1|5, 5MQ0|1|5, 5MPS|1|5(0) (1) 5Y88|1|B

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15NRL|1|5Structure of a pre-catalytic spliceosomeELECTRON MICROSCOPY7.2170
25LQW|1|5yeast activated spliceosomeELECTRON MICROSCOPY5.8141
35YLZ|1|BCryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstromELECTRON MICROSCOPY3.6117
45LJ5|1|UOverall structure of the yeast spliceosome immediately after branching.ELECTRON MICROSCOPY10141
56EXN|1|5Post-catalytic P complex spliceosome with 3' splice site dockedELECTRON MICROSCOPY3.7171
66BK8|1|5S. cerevisiae spliceosomal post-catalytic P complexELECTRON MICROSCOPY3.3103
75GMK|1|DCryo-EM structure of the Catalytic Step I spliceosome (C complex) at 3.4 angstrom resolutionELECTRON MICROSCOPY3.4117
85WSG|1|DCryo-EM structure of the Catalytic Step II spliceosome (C* complex) at 4.0 angstrom resolutionELECTRON MICROSCOPY4117
95MPS|1|5Structure of a spliceosome remodeled for exon ligationELECTRON MICROSCOPY3.85141
105LJ3|1|UStructure of the core of the yeast spliceosome immediately after branchingELECTRON MICROSCOPY3.8141
115GAN|1|UThe overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 AngstromELECTRON MICROSCOPY3.7141
125GAM|1|UFoot region of the yeast spliceosomal U4/U6.U5 tri-snRNPELECTRON MICROSCOPY3.7141
133JCM|1|FCryo-EM structure of the spliceosomal U4/U6.U5 tri-snRNPELECTRON MICROSCOPY3.8113
145MQ0|1|5Structure of a spliceosome remodeled for exon ligationELECTRON MICROSCOPY4.17141