Equivalence class NR_all_30791.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 1VTM|1|R (rep) | RNA (5'-R(P*GP*AP*A)-3') | Tobacco mild green mosaic virus | STRUCTURE OF THE U2 STRAIN OF TOBACCO MOSAIC VIRUS REFINED AT 3.5 ANGSTROMS RESOLUTION USING X-RAY FIBER DIFFRACTION | Fiber diffraction | 3.5 | 1994-07-31 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2014-12-05 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_30791.1 | NR_20.0_33592.1 | 2.1 | (1) 1VTM|1|R | (0) | (6) 2OM3|1|R, 1RMV|1|B, 3PDM|1|R, 1CGM|1|I, 2XEA|1|R, 2TMV|1|R |
| NR_all_30791.1 | NR_3.5_33592.1 | 2.1 | (1) 1VTM|1|R | (0) | (4) 1CGM|1|I, 3PDM|1|R, 2TMV|1|R, 1RMV|1|B |
| NR_all_30791.1 | NR_4.0_33592.1 | 2.1 | (1) 1VTM|1|R | (0) | (4) 1CGM|1|I, 3PDM|1|R, 2TMV|1|R, 1RMV|1|B |
| NR_all_30791.1 | NR_all_33592.1 | 2.1 | (1) 1VTM|1|R | (0) | (6) 1CGM|1|I, 2XEA|1|R, 2TMV|1|R, 2OM3|1|R, 1RMV|1|B, 3PDM|1|R |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 1VTM|1|R | STRUCTURE OF THE U2 STRAIN OF TOBACCO MOSAIC VIRUS REFINED AT 3.5 ANGSTROMS RESOLUTION USING X-RAY FIBER DIFFRACTION | FIBER DIFFRACTION | 3.5 | 3 |