#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14TUD|1|QV (rep)Transfer RNAP-site tRNA-fMet, A-site ASL-SufJ, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
24V9S|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic GE82832 bound to 70S ribosomeX-ray diffraction3.12014-07-09
34V9R|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction32014-07-09
44TUA|1|QVTransfer RNAP-site tRNA-fMet, A-site ASL-Thr, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
54P70|1|XVTransfer RNAP-site tRNA fMET, mRNA, A site ASL of tRNA-Proline CGG (unmodified)Escherichia coliBacteriaRF00005Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-ray diffraction3.682014-08-13
63JBN|1|7Transfer RNAP-tRNAEscherichia coliBacteriaRF00005Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNAElectron microscopy4.72015-10-14
74V7B|1|AVTransfer RNAmodified formyl-methionine specific initiator transfer RNA, messenger RNAEscherichia coliBacteriaRF00005Visualization of two tRNAs trapped in transit during EF-G-mediated translocationElectron microscopy6.82014-07-09
84V5F|1|AVTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), MRNAEscherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.62014-07-09
94V9S|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic GE82832 bound to 70S ribosomeX-ray diffraction3.12014-07-09
104V9R|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction32014-07-09
113JCE|1|8tRNA, mRNAsynthetic constructStructure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.22016-01-13
124V7M|1|AXTransfer RNAtRNA-Met, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliBacteriaRF00005The structures of Capreomycin bound to the 70S ribosome.X-ray diffraction3.452014-07-09
134V63|1|AYTransfer RNAP and E-site tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
144V67|1|AYTransfer RNAP AND E-SITE TRNA(FMET), MRNAEscherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
154V87|1|BCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
164V8F|1|CCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-ray diffraction3.32014-07-09
174V9I|1|CVTransfer RNAP-SITE tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.32014-07-09
184V6A|1|CWTransfer RNAtRNA-Met, RNA (5'-R(P*AP*AP*AP*UP*G)-3')Escherichia coliBacteriaRF00005Structure of EF-P bound to the 70S ribosome.X-ray diffraction3.12014-07-09
194V63|1|CYTransfer RNAP and E-site tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
204V67|1|CYTransfer RNAP AND E-SITE TRNA(FMET), MRNAEscherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
214V8C|1|DCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
224YZV|1|QVTransfer RNAP-site tRNA-fMet, messenger RNAEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-ray diffraction3.12015-10-21
234TUB|1|QVTransfer RNAP-site tRNA f-Met, A-site tRNA Thr, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
244TUB|1|XVTransfer RNAP-site tRNA f-Met, A-site tRNA Thr, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
254TUD|1|XVTransfer RNAP-site tRNA-fMet, A-site ASL-SufJ, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-ray diffraction3.62015-05-13
264V5F|1|CVTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), MRNAEscherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.62014-07-09
274Z3S|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.652015-06-03
285DOY|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.62015-12-30
294V8B|1|ACTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
304V67|1|AZTransfer RNAP AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
314V63|1|AZTransfer RNAP and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
324V8E|1|BCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-ray diffraction3.32014-07-09
334V8Q|1|BVTransfer RNAE-SITE or P-SITE TRNA FMET, MRNAEscherichia coliBacteriaRF00005Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-ray diffraction3.12014-07-09
344V8B|1|CCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
354V6G|1|CCTransfer RNATRNA FMET (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
364V8C|1|CCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
374V8J|1|CVTransfer RNAtRNA-fMet, tRNA-Phe, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G347U.X-ray diffraction3.92014-07-09
384V63|1|CZTransfer RNAP and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
394V67|1|CZTransfer RNAP AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
404V8E|1|DCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-ray diffraction3.32014-07-09
415D8B|1|EDTransfer RNAtRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-ray diffraction3.632015-10-14
425D8B|1|FDTransfer RNAtRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-ray diffraction3.632015-10-14
434TUC|1|QVTransfer RNAP-site tRNA fMet, A-site ASL-SufJ, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
444P70|1|QVTransfer RNAP-site tRNA fMET, mRNA, A site ASL of tRNA-Proline CGG (unmodified)Escherichia coliBacteriaRF00005Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-ray diffraction3.682014-08-13
454LT8|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL ProEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-ray diffraction3.142014-08-06
464LNT|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.942014-08-06
474W4G|1|XVTransfer RNAtRNA fMet, messenger RNAEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.32015-10-21
484P6F|1|XVTransfer RNAtRNA-fMet, E-Site tRNA-Phe or A-Site tRNA-Phe, mRNAEscherichia coliBacteriaRF00005Crystal structure of the peptolide 12C bound to bacterial ribosomeX-ray diffraction3.62014-10-01
494LT8|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL ProEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-ray diffraction3.142014-08-06
504YZV|1|XVTransfer RNAP-site tRNA-fMet, messenger RNAEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-ray diffraction3.12015-10-21
515HCR|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
525HCP|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.892016-04-06
535HCQ|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
544Y4P|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18
554WRO|1|2KTransfer RNAtRNA-fMet, RNA (30-MER)Escherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
564Y4P|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18
574Z8C|1|2xTransfer RNAInitiator Methionine tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.92015-05-20
583CW5|1|ATransfer RNAInitiator tRNAEscherichia coliBacteriaRF00005E. coli Initiator tRNAX-ray diffraction3.12008-09-02
594W2I|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
604W2G|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
614W2F|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
621VY5|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
634W2H|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.72014-10-15
644W2I|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
654W2G|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
664W2F|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
671VY5|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
684V4Z|1|ACTransfer RNAtRNA fMET (unmodified bases), mRNAEscherichia coliBacteriaRF0000570S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.X-ray diffraction4.512014-07-09
694V5C|1|AVTransfer RNAP-SITE TRNA FMET, MRNAEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.32014-07-09
705DOY|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.62015-12-30
714Z3S|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.652015-06-03
721VY6|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.92014-08-20
731VY4|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
741VY7|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
751VY6|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.92014-08-20
764WPO|1|DXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.82015-01-28
774V8D|1|ACTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction32014-07-09
784V9I|1|AVTransfer RNAP-SITE tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.32014-07-09
794V6A|1|AWTransfer RNAtRNA-Met, RNA (5'-R(P*AP*AP*AP*UP*G)-3')Escherichia coliBacteriaRF00005Structure of EF-P bound to the 70S ribosome.X-ray diffraction3.12014-07-09
804V87|1|CCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
814V7M|1|CXTransfer RNARNA (77-MER), RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliBacteriaRF00005The structures of Capreomycin bound to the 70S ribosome.X-ray diffraction3.452014-07-09
823J5S|1|ETransfer RNAP-site tRNA FMetEscherichia coliBacteriaRF00005EttA binds to ribosome exit site and regulates translation by restricting ribosome and tRNA dynamicsElectron microscopy7.52014-01-08
833J78|1|ETTransfer RNAP/E-site initiator transfer RNAfMetEscherichia coliBacteriaRF00005Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)Electron microscopy6.32014-08-06
843J77|1|PTTransfer RNAP/E-site initiator transfer RNAfMet, messenger RNAEscherichia coliBacteriaRF00005Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)Electron microscopy6.22014-08-06
854LNT|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.942014-08-06
864YPB|1|QVTransfer RNAtRNA fMet, messenger RNAEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.42015-10-21
874P6F|1|QVTransfer RNAtRNA-fMet, E-Site tRNA-Phe or A-Site tRNA-Phe, mRNAEscherichia coliBacteriaRF00005Crystal structure of the peptolide 12C bound to bacterial ribosomeX-ray diffraction3.62014-10-01
884TUC|1|XVTransfer RNAP-site tRNA fMet, A-site ASL-SufJ, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
894TUA|1|XVTransfer RNAP-site tRNA-fMet, A-site ASL-Thr, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-ray diffraction3.62015-05-13
904YPB|1|XVTransfer RNAtRNA fMet, messenger RNAEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.42015-10-21
913JBO|1|7Transfer RNAP/E-tRNAEscherichia coliBacteriaRF00005Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNAElectron microscopy5.82015-10-14
925HAU|1|1wTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction32016-04-06
934Z8C|1|1xTransfer RNAInitiator Methionine tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.92015-05-20
945J4B|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62016-04-27
954ZER|1|1xTransfer RNAtRNA met, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3.12015-05-20
965HD1|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.72016-04-06
975EL4|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-ray diffraction3.152016-01-27
984WQR|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.152015-06-10
994WT1|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
1004WSD|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.952015-06-10
1015EL6|1|2KTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-ray diffraction3.12016-01-27
1025EL7|1|2KTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-ray diffraction3.152016-01-27
1035HAU|1|2wTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction32016-04-06
1044ZER|1|2xTransfer RNAtRNA met, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3.12015-05-20
1055J4C|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82016-04-27
1065HD1|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.72016-04-06
1075HCP|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.892016-04-06
1085HCR|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
1095J4B|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62016-04-27
1105HCQ|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
1113CW6|1|ATransfer RNAInitiator tRNAEscherichia coliBacteriaRF00005E. coli Initiator tRNAX-ray diffraction3.32008-09-02
1124V6Y|1|A3Transfer RNAtRNA-fMet, 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'Escherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)Electron microscopy122014-07-09
1134V73|1|A3Transfer RNAtRNA-fMet, 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'Escherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)Electron microscopy152014-07-09
1144V6R|1|ADTransfer RNAP site tRNA, mRNAEscherichia coliBacteriaRF00005Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)Electron microscopy11.52014-07-09
1154WQY|1|BXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.82015-01-28
1164V8D|1|CCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction32014-07-09
1174V97|1|CVTransfer RNAP-SITE tRNA fMet, E-SITE TRNA PHE OR A-SITE tRNA Phe, mRNAEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G299A.X-ray diffraction3.522014-07-09
1183J78|1|PTTransfer RNAP/E-site initiator transfer RNAfMet, messenger RNAEscherichia coliBacteriaRF00005Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)Electron microscopy6.32014-08-06
1194LSK|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-ray diffraction3.482014-08-06
1204L71|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-ray diffraction3.92014-08-06
1214LFZ|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-ray diffraction3.922014-08-06
1224LEL|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-ray diffraction3.92014-08-06
1231VVJ|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-ray diffraction3.442014-08-06
1244W4G|1|QVTransfer RNAtRNA fMet, messenger RNAEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.32015-10-21
1254LFZ|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-ray diffraction3.922014-08-06
1264LEL|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-ray diffraction3.92014-08-06
1274LSK|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-ray diffraction3.482014-08-06
1284L71|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-ray diffraction3.92014-08-06
1291VVJ|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-ray diffraction3.442014-08-06
1304WR6|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-ray diffraction3.052015-06-10
1314WPO|1|BXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.82015-01-28
1324V6G|1|CBTransfer RNATRNA FMET (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
1335F8K|1|1xTransfer RNAtRNAiMet, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-02-03
1345J4C|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82016-04-27
1355EL5|1|2KTransfer RNAtRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-ray diffraction3.152016-01-27
1364WQ1|1|2KTransfer RNAtRNA-fMET, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.12015-06-10
1375E7K|1|2KTransfer RNAtRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-ray diffraction3.22016-01-27
1384WQ1|1|2LTransfer RNAtRNA-fMET, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.12015-06-10
1394WSD|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.952015-06-10
1405EL6|1|2LTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-ray diffraction3.12016-01-27
1415F8K|1|2xTransfer RNAtRNAiMet, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-02-03
1424V6Z|1|A3Transfer RNAtRNA-fMet, 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'Escherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)Electron microscopy122014-07-09
1434V6O|1|ADTransfer RNAP site tRNA, mRNAEscherichia coliBacteriaRF00005Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)Electron microscopy14.72014-07-09
1444V6P|1|ADTransfer RNAP site tRNA, mRNAEscherichia coliBacteriaRF00005Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)Electron microscopy13.52014-07-09
1454W2H|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.72014-10-15
1464WQY|1|DXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.82015-01-28
1474V69|1|AVTransfer RNAE-site tRNA Phe, mRNAEscherichia coliBacteriaRF00005Ternary complex-bound E.coli 70S ribosome.Electron microscopy6.72014-07-09
1484V51|1|AVTransfer RNAP-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.82014-07-09
1493DEG|1|BTransfer RNAP-tRNAEscherichia coliBacteriaRF00005Complex of elongating Escherichia coli 70S ribosome and EF4(LepA)-GMPPNPElectron microscopy10.92008-08-19
1504V51|1|CVTransfer RNAP-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.82014-07-09
1514V5F|1|CWTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.62014-07-09
1524WRA|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-ray diffraction3.052015-06-10
1534WZO|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.32015-06-10
1544V6G|1|ACTransfer RNATRNA FMET (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
1554V5K|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09
1564V97|1|AVTransfer RNAP-SITE tRNA fMet, E-SITE TRNA PHE OR A-SITE tRNA Phe, mRNAEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G299A.X-ray diffraction3.522014-07-09
1574V7P|1|AWTransfer RNAP-site tRNA-fMet, messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')Escherichia coliBacteriaRF00005Recognition of the amber stop codon by release factor RF1.X-ray diffraction3.622014-07-09
1584V7L|1|AXTransfer RNAtRNA-Met, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliBacteriaRF00005The structures of viomycin bound to the 70S ribosome.X-ray diffraction32014-07-09
1595D8B|1|BDTransfer RNAtRNAEscherichia coliBacteriaRF00005Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-ray diffraction3.632015-10-14
1604V7P|1|DWTransfer RNAP-site tRNA-fMet, messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')Escherichia coliBacteriaRF00005Recognition of the amber stop codon by release factor RF1.X-ray diffraction3.622014-07-09
1615D8B|1|XCTransfer RNAtRNAEscherichia coliBacteriaRF00005Crystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-ray diffraction3.632015-10-14
1621VY4|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
1631VY7|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
1644WZO|1|1KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.32015-06-10
1654WZO|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.32015-06-10
1665E7K|1|2LTransfer RNAtRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-ray diffraction3.22016-01-27
1674V6V|1|A3Transfer RNAP-tRNA, mRNAEscherichia coliBacteriaRF00005Tetracycline resistance protein Tet(O) bound to the ribosomeElectron microscopy9.82014-07-09
1684V72|1|A3Transfer RNAtRNA-fMet, 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'Escherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)Electron microscopy132014-07-09
1694V74|1|A3Transfer RNAtRNA-fMet, 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'Escherichia coliBacteriaRF0000570S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)Electron microscopy172014-07-09
1704V71|1|A3Transfer RNAtRNA-fMet, 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'Escherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)Electron microscopy202014-07-09
1714V70|1|A3Transfer RNAtRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)Electron microscopy172014-07-09
1724V6Q|1|ADTransfer RNAP site tRNA, mRNAEscherichia coliBacteriaRF00005Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)Electron microscopy11.52014-07-09
1734V6S|1|BCTransfer RNAP site tRNA, mRNAEscherichia coliBacteriaRF00005Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)Electron microscopy13.12014-07-09
1742FMT|1|CFORMYL-METHIONYL-TRNAFMET2synthetic constructMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-ray diffraction2.81999-07-29
1752FMT|1|DFORMYL-METHIONYL-TRNAFMET2synthetic constructMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-ray diffraction2.81999-07-29
1764V5C|1|CVTransfer RNAP-SITE TRNA FMET, MRNAEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.32014-07-09
1774WRA|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-ray diffraction3.052015-06-10
1783J9Y|1|vTransfer RNAP-site fMet-tRNAfMet, mRNAEscherichia coliBacteriaRF00005Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeElectron microscopy3.92015-04-15
1795AFI|1|vTransfer RNAP-site fMet-tRNAfMet, mRNAEscherichia coliBacteriaRF000052.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.92015-03-11
1804V8F|1|BCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-ray diffraction3.32014-07-09
1814V6G|1|CDTransfer RNATRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
1825EL4|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-ray diffraction3.152016-01-27
1834WRO|1|2LTransfer RNAtRNA-fMet, RNA (30-MER)Escherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
1844V78|1|A3Transfer RNAtRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)Electron microscopy202014-07-09
1854V77|1|A3Transfer RNAtRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)Electron microscopy172014-07-09
1864V79|1|A3Transfer RNAtRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)Electron microscopy152014-07-09
1874V4X|1|ACTransfer RNAtRNA fMET (unmodified bases)Escherichia coliBacteriaRF00005Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.X-ray diffraction52014-07-09
1884V8J|1|AVTransfer RNAtRNA-fMet, tRNA-Phe, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G347U.X-ray diffraction3.92014-07-09
1894V5K|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09
1903V11|1|DTransfer RNAInitiator tRNAEscherichia coliBacteriaRF00005Structure of the ternary initiation complex AIF2:GDPNP:methionylated initiator TRNAX-ray diffraction52012-03-28
1915EL5|1|2LTransfer RNAtRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-ray diffraction3.152016-01-27
1924WT1|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
1934WQR|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.152015-06-10
1945EL7|1|2LTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-ray diffraction3.152016-01-27
1954V75|1|A3Transfer RNAtRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)Electron microscopy122014-07-09
1964YPB|1|QWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.42015-10-21
1974W4G|1|QWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.32015-10-21
1984W4G|1|XWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.32015-10-21
1994YPB|1|XWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.42015-10-21
2004WR6|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-ray diffraction3.052015-06-10
2014V76|1|A3Transfer RNAtRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)Electron microscopy172014-07-09
2023JCN|1|vTransfer RNAtRNA, messenger RNAEscherichia coliBacteriaRF00005Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex IElectron microscopy4.62016-03-09
2033JCJ|1|vTransfer RNAtRNA, messenger RNAEscherichia coliBacteriaRF00005Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationElectron microscopy3.72016-03-09
2044V6G|1|ADTransfer RNATRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
2054V7L|1|CXTransfer RNAtRNA-Met, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliBacteriaRF00005The structures of viomycin bound to the 70S ribosome.X-ray diffraction32014-07-09
2064V6N|1|BDTransfer RNAP site tRNA, mRNAEscherichia coliBacteriaRF00005Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)Electron microscopy12.12014-07-09
2074V5F|1|AWTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.62014-07-09
2084V8Q|1|BWTransfer RNAE-SITE or P-SITE TRNA FMETEscherichia coliBacteriaRF00005Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-ray diffraction3.12014-07-09
2094V8O|1|AVTransfer RNAPE HYBRID STATE TRNA FMET, MRNA 5'-R(*AP*AP*AP*AP*AP*AP*UP*GP*UP)-3'Escherichia coliBacteriaRF00005Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3X-ray diffraction3.82014-07-09
2104V6T|1|AXTransfer RNAformyl-methionine specific initiator transfer RNAEscherichia coliBacteriaRF00005Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loadingElectron microscopy8.32014-07-09
2114V8C|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
2124V8B|1|ADTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
2134V87|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
2144V8C|1|DDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
2154V87|1|BDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
2164V8B|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
2175AFI|1|wTransfer RNAP-site fMet-tRNAfMetEscherichia coliBacteriaRF000052.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.92015-03-11
2183QSY|1|DTransfer RNAtRNAEscherichia coliBacteriaRF00005Recognition of the methionylated initiator tRNA by the translation initiation factor 2 in ArchaeaX-ray diffraction3.22012-03-21
2194V5K|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09
2204V5K|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09
2211EG0|1|OTransfer RNAFORMYL-METHIONYL-TRNAEscherichia coliBacteriaRF00005FITTING OF COMPONENTS WITH KNOWN STRUCTURE INTO AN 11.5 A CRYO-EM MAP OF THE E.COLI 70S RIBOSOMEElectron microscopy11.52000-03-06

Release history

Release2.73
Date2016-04-29

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_35542.18NR_2.5_35542.192.74(4) 4Y4P|1|1x, 4Y4P|1|2x, 4W2F|1|AX, 4W2F|1|CX(217) 4WRO|1|2K, 4W4G|1|QW, 4W4G|1|QV, 4W2I|1|CX, 4W2I|1|AX, 4W2H|1|CX, 4W2H|1|AX, 4W2G|1|CX, 4W2G|1|AX, 4V9S|1|CX, 4V9S|1|AX, 4V9R|1|CX, 4W4G|1|XV, 4W4G|1|XW, 4WPO|1|BX, 4WRA|1|2L, 4WRA|1|2K, 4WR6|1|2L, 4WR6|1|2K, 4WQY|1|DX, 4WQY|1|BX, 4WQR|1|2L, 4WQR|1|2K, 4WQ1|1|2L, 4WQ1|1|2K, 4WPO|1|DX, 4V9R|1|AX, 4V9I|1|CV, 4V8C|1|DD, 4V8C|1|DC, 4V8C|1|CD, 4V8C|1|CC, 4V8B|1|CD, 4V8B|1|CC, 4V8B|1|AD, 4V8B|1|AC, 4V87|1|CD, 4V87|1|CC, 4V87|1|BD, 4V8D|1|AC, 4V8D|1|CC, 4V8E|1|BC, 4V9I|1|AV, 4V97|1|CV, 4V97|1|AV, 4V8Q|1|BW, 4V8Q|1|BV, 4V8O|1|AV, 4V8J|1|CV, 4V8J|1|AV, 4V8F|1|CC, 4V8F|1|BC, 4V8E|1|DC, 4V87|1|BC, 5J4C|1|2x, 5F8K|1|1x, 5EL7|1|2L, 5EL7|1|2K, 5EL6|1|2L, 5EL6|1|2K, 5EL5|1|2L, 5EL5|1|2K, 5EL4|1|2L, 5EL4|1|2K, 5E7K|1|2L, 5E7K|1|2K, 5F8K|1|2x, 5HAU|1|1w, 5HAU|1|2w, 5J4C|1|1x, 5J4B|1|2x, 5J4B|1|1x, 5HD1|1|2x, 5HD1|1|1x, 5HCR|1|2x, 5HCR|1|1x, 5HCQ|1|2x, 5HCQ|1|1x, 5HCP|1|2x, 5HCP|1|1x, 5DOY|1|2x, 5DOY|1|1x, 4YPB|1|XW, 4YPB|1|XV, 4YPB|1|QW, 4YPB|1|QV, 4WZO|1|2L, 4WZO|1|2K, 4WZO|1|1K, 4WT1|1|2L, 4WT1|1|2K, 4WSD|1|2L, 4WSD|1|2K, 4(0)
NR_all_35542.18NR_20.0_35542.192.74(221) 4W2I|1|AX, 4W2I|1|CX, 4W4G|1|QV, 4W4G|1|QW, 4W4G|1|XV, 4W2H|1|CX, 4W2H|1|AX, 4W2G|1|CX, 4W2G|1|AX, 4W2F|1|CX, 4W2F|1|AX, 4V9S|1|CX, 4W4G|1|XW, 4WPO|1|BX, 4WPO|1|DX, 4WRO|1|2K, 4WRA|1|2L, 4WRA|1|2K, 4WR6|1|2L, 4WR6|1|2K, 4WQY|1|DX, 4WQY|1|BX, 4WQR|1|2L, 4WQR|1|2K, 4WQ1|1|2L, 4WQ1|1|2K, 4WRO|1|2L, 4V9S|1|AX, 4V9R|1|CX, 4V8D|1|CC, 4V8D|1|AC, 4V8C|1|DD, 4V8C|1|DC, 4V8C|1|CD, 4V8C|1|CC, 4V8B|1|CD, 4V8B|1|CC, 4V8B|1|AD, 4V8B|1|AC, 4V87|1|CD, 4V8E|1|BC, 4V8E|1|DC, 4V8F|1|BC, 4V9R|1|AX, 4V9I|1|CV, 4V9I|1|AV, 4V97|1|CV, 4V97|1|AV, 4V8Q|1|BW, 4V8Q|1|BV, 4V8O|1|AV, 4V8J|1|CV, 4V8J|1|AV, 4V8F|1|CC, 4V87|1|CC, 5J4C|1|2x, 5F8K|1|1x, 5EL7|1|2L, 5EL7|1|2K, 5EL6|1|2L, 5EL6|1|2K, 5EL5|1|2L, 5EL5|1|2K, 5EL4|1|2L, 5EL4|1|2K, 5E7K|1|2L, 5E7K|1|2K, 5F8K|1|2x, 5HAU|1|1w, 5HAU|1|2w, 5J4C|1|1x, 5J4B|1|2x, 5J4B|1|1x, 5HD1|1|2x, 5HD1|1|1x, 5HCR|1|2x, 5HCR|1|1x, 5HCQ|1|2x, 5HCQ|1|1x, 5HCP|1|2x, 5HCP|1|1x, 5DOY|1|2x, 5DOY|1|1x, 5D8B|1|XC, 4YPB|1|XV, 4YPB|1|QW, 4YPB|1|QV, 4Y4P|1|2x, 4Y4P|1|1x, 4WZO|1|2L, 4WZO|1|2K, 4WZO|1|1K, 4WT1|1|2L, 4(0) (1) 5IQR|1|5
NR_all_35542.18NR_3.0_35542.192.74(68) 1VY6|1|AX, 1VY5|1|CX, 1VY7|1|AX, 1VY6|1|CX, 1VY4|1|CX, 1VY4|1|AX, 1VY5|1|AX, 4V67|1|AZ, 4V67|1|AY, 4V67|1|CY, 4V51|1|CV, 4V7L|1|AX, 4V7L|1|CX, 4V67|1|CZ, 2FMT|1|C, 2FMT|1|D, 1VY7|1|CX, 4LNT|1|XV, 4V51|1|AV, 4LNT|1|QV, 4Y4P|1|1x, 4WSD|1|2L, 4Y4P|1|2x, 4WSD|1|2K, 4Z3S|1|2x, 4Z8C|1|1x, 4Z3S|1|1x, 4W2I|1|CX, 4WPO|1|BX, 4W2H|1|CX, 4W2I|1|AX, 4WQY|1|BX, 4WQY|1|DX, 4WPO|1|DX, 5HAU|1|2w, 5HCP|1|1x, 5HCP|1|2x, 5HAU|1|1w, 5F8K|1|2x, 5HCQ|1|2x, 5HCQ|1|1x, 5HCR|1|1x, 5AFI|1|w, 5AFI|1|v, 5DOY|1|1x, 4Z8C|1|2x, 5F8K|1|1x, 5DOY|1|2x, 4W2F|1|AX, 4W2F|1|CX, 4W2G|1|AX, 4V9R|1|CX, 4V9R|1|AX, 4W2H|1|AX, 4W2G|1|CX, 4V8B|1|CC, 4V8B|1|AD, 4V8B|1|CD, 4V8B|1|AC, 4V8D|1|CC, 4V8D|1|AC, 5J4B|1|2x, 5J4C|1|1x, 5J4B|1|1x, 5J4C|1|2x, 5HCR|1|2x, 5HD1|1|1x, 5HD1|1|2x(153) 4V4X|1|AC, 4V4Z|1|AC, 4V5C|1|AV, 4V5C|1|CV, 4V5F|1|AV, 4V5F|1|AW, 4TUD|1|XV, 4TUD|1|QV, 4TUC|1|XV, 4TUC|1|QV, 4TUB|1|XV, 4TUB|1|QV, 4TUA|1|XV, 4TUA|1|QV, 4V5F|1|CV, 4V5F|1|CW, 4V6G|1|AD, 4V6G|1|AC, 4V6A|1|CW, 4V6A|1|AW, 4V69|1|AV, 4V63|1|CZ, 4V63|1|CY, 4V63|1|AZ, 4V63|1|AY, 4V5K|1|CW, 4V5K|1|CV, 4V5K|1|AW, 4V5K|1|AV, 4V6G|1|CB, 4P70|1|XV, 4P70|1|QV, 3JCJ|1|v, 3JCE|1|8, 3JBO|1|7, 3JBN|1|7, 3J9Y|1|v, 3J78|1|PT, 3J78|1|ET, 3J77|1|PT, 3J5S|1|E, 3DEG|1|B, 3CW6|1|A, 3CW5|1|A, 1VVJ|1|XV, 3JCN|1|v, 3QSY|1|D, 4P6F|1|XV, 4P6F|1|QV, 4LT8|1|XV, 4LT8|1|QV, 4LSK|1|XV, 4LSK|1|QV, 4LFZ|1|XV, 4LFZ|1|QV, 4LEL|1|XV, 4LEL|1|QV, 4L71|1|XV, 4L71|1|QV, 3V11|1|D, 1VVJ|1|QV, 4WRA|1|2K, 4V97|1|AV, 4V8Q|1|BW, 4V8Q|1|BV, 4V8O|1|AV, 4V8J|1|CV, 4V8J|1|AV, 4V8F|1|CC, 4V8F|1|BC, 4V8E|1|DC, 4V8E|1|BC, 4V8C|1|DD, 4V8C|1|DC, 4V8C|1|CD, 4V97|1|CV, 4V9I|1|AV, 4WR6|1|2L, 4WR6|1|2K, 4WQR|1|2L, 4WQR|1|2K, 4WQ1|1|2L, 4WQ1|1|2K, 4W4G|1|XW, 4W4G|1|XV, 4W4G|1|QW, 4W4G|1|QV, 4V9S|1|CX, 4V9S|1|AX, 4V9I|1|CV, 4V8C|1|CC, 4V87|1|CD, 4V87|1|CC, 4V71|1|A3, 4V(1) 5IQR|1|5
NR_all_35542.18NR_3.5_35542.192.74(152) 1VY7|1|AX, 1VY7|1|CX, 2FMT|1|C, 1VY6|1|CX, 1VY6|1|AX, 3CW5|1|A, 2FMT|1|D, 3CW6|1|A, 1VY4|1|AX, 1VVJ|1|XV, 1VY4|1|CX, 1VVJ|1|QV, 1VY5|1|CX, 1VY5|1|AX, 4V8E|1|BC, 4V8D|1|CC, 4V8E|1|DC, 4V8F|1|BC, 4V8C|1|DC, 4V8C|1|DD, 4V8C|1|CD, 4V8D|1|AC, 4V9I|1|CV, 4V9R|1|AX, 4V9I|1|AV, 4V9R|1|CX, 4V9S|1|AX, 4V8F|1|CC, 4V8Q|1|BV, 4V8Q|1|BW, 4V7M|1|CX, 4V7M|1|AX, 4V87|1|BC, 4V87|1|BD, 4V6G|1|CD, 4V7L|1|AX, 4V6G|1|CC, 4V7L|1|CX, 4V8B|1|CC, 4V8B|1|CD, 4V8B|1|AD, 4V8C|1|CC, 4V87|1|CC, 4V87|1|CD, 4V8B|1|AC, 4WQY|1|BX, 4WQR|1|2L, 4WQY|1|DX, 4WR6|1|2K, 4WQ1|1|2K, 4WQ1|1|2L, 4WPO|1|DX, 4WQR|1|2K, 4WRO|1|2L, 4WSD|1|2K, 4WRO|1|2K, 4WSD|1|2L, 4WT1|1|2K, 4WR6|1|2L, 4WRA|1|2K, 4WRA|1|2L, 4W2G|1|CX, 4W2G|1|AX, 4W2H|1|AX, 4W2H|1|CX, 4V9S|1|CX, 4W2F|1|AX, 4W2F|1|CX, 4W4G|1|XV, 4W4G|1|XW, 4W4G|1|QW, 4WPO|1|BX, 4W2I|1|AX, 4W2I|1|CX, 4W4G|1|QV, 4V63|1|CZ, 4V63|1|CY, 4V67|1|AY, 4V67|1|AZ, 4V5K|1|CW, 4V63|1|AY, 4V5K|1|CV, 4V63|1|AZ, 4V6G|1|AC, 4V6G|1|AD, 4V6A|1|CW, 4V6G|1|CB, 4V67|1|CY, 4V67|1|CZ, 4V6A|1|AW, 4LSK|1|QV, 4LNT|1|XV, 4LSK|1|XV, 4LT8|(69) 5D8B|1|BD, 4V97|1|CV, 4V97|1|AV, 4V8O|1|AV, 4V8J|1|CV, 4V8J|1|AV, 4V7P|1|DW, 4V7P|1|AW, 4V7B|1|AV, 4V79|1|A3, 4V78|1|A3, 4V77|1|A3, 4V76|1|A3, 5D8B|1|ED, 5D8B|1|FD, 3JCN|1|v, 3JCJ|1|v, 3JBO|1|7, 3JBN|1|7, 3J9Y|1|v, 3J78|1|PT, 3J78|1|ET, 3J77|1|PT, 3J5S|1|E, 3DEG|1|B, 1EG0|1|O, 5D8B|1|XC, 3V11|1|D, 4V75|1|A3, 4V74|1|A3, 4V69|1|AV, 4V5F|1|CW, 4V5F|1|CV, 4V5F|1|AW, 4V5F|1|AV, 4V4Z|1|AC, 4V4X|1|AC, 4TUD|1|XV, 4TUD|1|QV, 4TUC|1|XV, 4TUC|1|QV, 4TUB|1|XV, 4V6N|1|BD, 4V6O|1|AD, 4V73|1|A3, 4V72|1|A3, 4V71|1|A3, 4V70|1|A3, 4V6Z|1|A3, 4V6Y|1|A3, 4V6V|1|A3, 4V6T|1|AX, 4V6S|1|BC, 4V6R|1|AD, 4V6Q|1|AD, 4V6P|1|AD, 4TUB|1|QV, 4L71|1|QV, 4TUA|1|XV, 4TUA|1|QV, 4P70|1|XV, 4P70|1|QV, 4P6F|1|XV, 4P6F|1|QV, 4LFZ|1|XV, 4LFZ|1|QV, 4LEL|1|XV, 4LEL|1|QV, 4L71|1|XV(1) 5IQR|1|5
NR_all_35542.18NR_4.0_35542.192.74(187) 3JCE|1|8, 3J9Y|1|v, 3QSY|1|D, 3JCJ|1|v, 3CW5|1|A, 2FMT|1|D, 3CW6|1|A, 4LEL|1|XV, 4LEL|1|QV, 4LFZ|1|QV, 4L71|1|QV, 4L71|1|XV, 1VY5|1|AX, 1VY4|1|CX, 1VY4|1|AX, 1VY5|1|CX, 1VVJ|1|XV, 1VVJ|1|QV, 1VY7|1|CX, 1VY7|1|AX, 2FMT|1|C, 1VY6|1|CX, 1VY6|1|AX, 4V6A|1|AW, 4V6A|1|CW, 4V6G|1|AC, 4V67|1|CY, 4V67|1|CZ, 4V6G|1|CB, 4V6G|1|CC, 4V6G|1|CD, 4V6G|1|AD, 4V63|1|AZ, 4V63|1|CY, 4V63|1|CZ, 4V5K|1|CW, 4V63|1|AY, 4V67|1|AZ, 4V67|1|AY, 4V87|1|CD, 4V8B|1|AC, 4V87|1|BD, 4V87|1|CC, 4V8B|1|CC, 4V8B|1|CD, 4V8C|1|CC, 4V8B|1|AD, 4V7L|1|CX, 4V7M|1|AX, 4V7M|1|CX, 4V7L|1|AX, 4V7P|1|DW, 4V87|1|BC, 4V7P|1|AW, 4P70|1|QV, 4P70|1|XV, 4TUA|1|QV, 4P6F|1|QV, 4P6F|1|XV, 4TUB|1|QV, 4TUB|1|XV, 4TUC|1|QV, 4TUA|1|XV, 4LNT|1|QV, 4LNT|1|XV, 4LSK|1|QV, 4LFZ|1|XV, 4LT8|1|QV, 4LT8|1|XV, 4LSK|1|XV, 4V5F|1|AW, 4V5F|1|CV, 4V5F|1|CW, 4V5C|1|CV, 4V5F|1|AV, 4V5K|1|AW, 4V5K|1|CV, 4V5K|1|AV, 4TUD|1|QV, 4TUD|1|XV, 4TUC|1|XV, 4V51|1|CV, 4V5C|1|AV, 4V51|1|AV, 5F8K|1|2x, 5HAU|1|1w, 5F8K|1|1x, 5HCP|1|1x, 5HCP|1|2x, 5HAU|1|2w, 5EL6|1|2K, 5EL6|1|2L, 5EL5|1|2K, 5EL5|1|2L(34) 4V4X|1|AC, 3V11|1|D, 3JCN|1|v, 3JBO|1|7, 3JBN|1|7, 3J78|1|PT, 3J78|1|ET, 3J77|1|PT, 3J5S|1|E, 3DEG|1|B, 1EG0|1|O, 4V4Z|1|AC, 4V69|1|AV, 4V6Z|1|A3, 4V6Y|1|A3, 4V6V|1|A3, 4V6T|1|AX, 4V6S|1|BC, 4V6R|1|AD, 4V6Q|1|AD, 4V6P|1|AD, 4V6O|1|AD, 4V6N|1|BD, 4V70|1|A3, 4V7B|1|AV, 4V79|1|A3, 4V78|1|A3, 4V77|1|A3, 4V76|1|A3, 4V75|1|A3, 4V74|1|A3, 4V73|1|A3, 4V72|1|A3, 4V71|1|A3(1) 5IQR|1|5
NR_all_35542.18NR_all_35542.192.74(221) 4W2I|1|AX, 4W2I|1|CX, 4W4G|1|QV, 4W4G|1|QW, 4W4G|1|XV, 4W2H|1|CX, 4W2H|1|AX, 4W2G|1|CX, 4W2G|1|AX, 4W2F|1|CX, 4W2F|1|AX, 4V9S|1|CX, 4W4G|1|XW, 4WPO|1|BX, 4WPO|1|DX, 4WRO|1|2K, 4WRA|1|2L, 4WRA|1|2K, 4WR6|1|2L, 4WR6|1|2K, 4WQY|1|DX, 4WQY|1|BX, 4WQR|1|2L, 4WQR|1|2K, 4WQ1|1|2L, 4WQ1|1|2K, 4WRO|1|2L, 4V9S|1|AX, 4V9R|1|CX, 4V8D|1|CC, 4V8D|1|AC, 4V8C|1|DD, 4V8C|1|DC, 4V8C|1|CD, 4V8C|1|CC, 4V8B|1|CD, 4V8B|1|CC, 4V8B|1|AD, 4V8B|1|AC, 4V87|1|CD, 4V8E|1|BC, 4V8E|1|DC, 4V8F|1|BC, 4V9R|1|AX, 4V9I|1|CV, 4V9I|1|AV, 4V97|1|CV, 4V97|1|AV, 4V8Q|1|BW, 4V8Q|1|BV, 4V8O|1|AV, 4V8J|1|CV, 4V8J|1|AV, 4V8F|1|CC, 4V87|1|CC, 5J4C|1|2x, 5F8K|1|1x, 5EL7|1|2L, 5EL7|1|2K, 5EL6|1|2L, 5EL6|1|2K, 5EL5|1|2L, 5EL5|1|2K, 5EL4|1|2L, 5EL4|1|2K, 5E7K|1|2L, 5E7K|1|2K, 5F8K|1|2x, 5HAU|1|1w, 5HAU|1|2w, 5J4C|1|1x, 5J4B|1|2x, 5J4B|1|1x, 5HD1|1|2x, 5HD1|1|1x, 5HCR|1|2x, 5HCR|1|1x, 5HCQ|1|2x, 5HCQ|1|1x, 5HCP|1|2x, 5HCP|1|1x, 5DOY|1|2x, 5DOY|1|1x, 5D8B|1|XC, 4YPB|1|XV, 4YPB|1|QW, 4YPB|1|QV, 4Y4P|1|2x, 4Y4P|1|1x, 4WZO|1|2L, 4WZO|1|2K, 4WZO|1|1K, 4WT1|1|2L, 4(0) (1) 5IQR|1|5

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
11EG0|1|OFITTING OF COMPONENTS WITH KNOWN STRUCTURE INTO AN 11.5 A CRYO-EM MAP OF THE E.COLI 70S RIBOSOMEELECTRON MICROSCOPY11.571
24V79|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)ELECTRON MICROSCOPY1572
34V6O|1|ADStructural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)ELECTRON MICROSCOPY14.772
44V6P|1|ADStructural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)ELECTRON MICROSCOPY13.572
54V74|1|A370S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)ELECTRON MICROSCOPY1772
64V77|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)ELECTRON MICROSCOPY1772
74V6S|1|BCStructural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)ELECTRON MICROSCOPY13.172
84V6N|1|BDStructural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)ELECTRON MICROSCOPY12.172
94V6V|1|A3Tetracycline resistance protein Tet(O) bound to the ribosomeELECTRON MICROSCOPY9.872
104V4Z|1|AC70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.X-RAY DIFFRACTION4.5176
114V4X|1|ACCrystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.X-RAY DIFFRACTION576
123JBN|1|7Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNAELECTRON MICROSCOPY4.776
134V97|1|AVCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.5277
144V97|1|CVCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.5277
154V8J|1|CVCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.977
164V8J|1|AVCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.977
174P70|1|QVCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.6877
184P6F|1|QVCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.677
194LNT|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
204L71|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.977
214L71|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.977
224LSK|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.4877
234LFZ|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.9277
241VVJ|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.4477
254LEL|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.977
264LEL|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.977
274LFZ|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.9277
284LSK|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.4877
291VVJ|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.4477
304LT8|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.1477
314V67|1|AYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
324V67|1|CYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
334W4G|1|XVPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
344YZV|1|XVPrecleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-RAY DIFFRACTION3.177
354YPB|1|XVPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
364V63|1|CYStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
374V63|1|AYStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
384V7P|1|AWRecognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.6277
394V7P|1|DWRecognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.6277
404V6A|1|CWStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.177
414V6A|1|AWStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.177
424V5F|1|CVThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
434V5F|1|AVThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
444V7B|1|AVVisualization of two tRNAs trapped in transit during EF-G-mediated translocationELECTRON MICROSCOPY6.876
454V5K|1|CVStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
464V51|1|CVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
473DEG|1|BComplex of elongating Escherichia coli 70S ribosome and EF4(LepA)-GMPPNPELECTRON MICROSCOPY10.976
484V51|1|AVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
494V9I|1|CVCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.377
504V9I|1|AVCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.377
514TUA|1|QVCrystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
524TUC|1|XVCrystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
534V7M|1|AXThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4577
544V7M|1|CXThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4577
554V5C|1|AVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
564V7L|1|AXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
574V7L|1|CXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
581VY7|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.871
594Z3S|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6571
605J4C|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.872
615J4B|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.672
624Y4P|1|2xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.572
635DOY|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.671
644V9R|1|CXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
654V9S|1|CXCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.176
664W2H|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.772
674W2I|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.772
684W2F|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.472
694W2G|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5572
701VY5|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5572
711VY4|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.671
721VY6|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.971
734WQY|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.872
744WPO|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.871
754TUC|1|QVCrystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
764TUD|1|QVCrystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
774LT8|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.1477
784TUB|1|QVCrystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
794LNT|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
804P6F|1|XVCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.677
814P70|1|XVCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.6877
824TUB|1|XVCrystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
834TUA|1|XVCrystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
844TUD|1|XVCrystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
854YZV|1|QVPrecleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-RAY DIFFRACTION3.177
864W4G|1|QVPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
874YPB|1|QVPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
884V8Q|1|BVComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.177
895D8B|1|FDCrystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-RAY DIFFRACTION3.6377
905D8B|1|EDCrystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-RAY DIFFRACTION3.6377
913JCE|1|8Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.277
923J78|1|PTStructures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)ELECTRON MICROSCOPY6.377
934V6G|1|ACInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
943J5S|1|EEttA binds to ribosome exit site and regulates translation by restricting ribosome and tRNA dynamicsELECTRON MICROSCOPY7.577
954V69|1|AVTernary complex-bound E.coli 70S ribosome.ELECTRON MICROSCOPY6.776
964V5C|1|CVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
975AFI|1|v2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.973
983J9Y|1|vCryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.973
995HCP|1|2xCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8972
1004Z8C|1|2xCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.972
1015HCQ|1|2xCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
1025HCR|1|2xCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
1035HD1|1|2xCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.772
1045HD1|1|1xCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.772
1055HCR|1|1xCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
1065HCP|1|1xCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8972
1075HCQ|1|1xCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
1084Z8C|1|1xCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.972
1095HAU|1|1wCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION372
1105HAU|1|2wCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION372
1115DOY|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.671
1124Z3S|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6571
1134W2I|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.772
1144V9R|1|AXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
1154V9S|1|AXCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.176
1164W2G|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5572
1171VY5|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5572
1181VY4|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.671
1191VY6|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.971
1201VY7|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.871
1214W2F|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.472
1225J4C|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.872
1235J4B|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.672
1244Y4P|1|1xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.572
1254WPO|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.871
1264WQY|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.872
1274W2H|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.772
1284V5K|1|AVStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
1294ZER|1|2xCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.172
1305F8K|1|2xCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
1314ZER|1|1xCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.172
1325F8K|1|1xCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
1334V8B|1|ACCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
1344V87|1|BCCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
1354V6G|1|CCInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
1364V8B|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
1374V87|1|CCCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
1384V8C|1|DCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
1394V8C|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
1405EL4|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-RAY DIFFRACTION3.1572
1414WQ1|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.172
1424WRO|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
1434V8F|1|BCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.377
1444V8D|1|ACStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
1454WQR|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1572
1464WT1|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
1474WQR|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1572
1484WSD|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9572
1494WR6|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.0571
1504WZO|1|2KComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.372
1515EL6|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-RAY DIFFRACTION3.172
1525E7K|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-RAY DIFFRACTION3.272
1534V8E|1|DCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.377
1544V8E|1|BCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.377
1555EL7|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-RAY DIFFRACTION3.1572
1564WRA|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.0573
1574WSD|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9572
1584WT1|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
1594WRO|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
1604WZO|1|2LComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.373
1615EL4|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-RAY DIFFRACTION3.1571
1624WR6|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.0572
1634WQ1|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.172
1644V8D|1|CCStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
1654V8F|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.377
1664WRA|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.0573
1675EL5|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-RAY DIFFRACTION3.1572
1685EL5|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-RAY DIFFRACTION3.1572
1695EL6|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-RAY DIFFRACTION3.172
1705E7K|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-RAY DIFFRACTION3.272
1715EL7|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-RAY DIFFRACTION3.1572
1724V71|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)ELECTRON MICROSCOPY2072
1734V6Z|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)ELECTRON MICROSCOPY1272
1744V6Y|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)ELECTRON MICROSCOPY1272
1754V6G|1|CBInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.565
1764WZO|1|1KComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.368
1775AFI|1|w2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.973
1784V5F|1|AWThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
1794V5F|1|CWThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
1804V5K|1|CWStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
1814V5K|1|AWStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
1824V8Q|1|BWComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.177
1834V63|1|CZStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1844V63|1|AZStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1855D8B|1|XCCrystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-RAY DIFFRACTION3.6377
1865D8B|1|BDCrystal structure of T. thermophilus ribosome containing a P-site wobble mismatchX-RAY DIFFRACTION3.6377
1874V67|1|CZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1884V67|1|AZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1894V6G|1|CDInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
1904W4G|1|XWPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
1914YPB|1|XWPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
1924YPB|1|QWPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
1934W4G|1|QWPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
1944V87|1|BDCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
1954V8B|1|ADCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
1964V8C|1|CDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
1974V8C|1|DDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
1984V8B|1|CDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
1994V87|1|CDCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
2004V6G|1|ADInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
2014V6T|1|AXStructure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loadingELECTRON MICROSCOPY8.377
2024V8O|1|AVCrystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3X-RAY DIFFRACTION3.877
2033J77|1|PTStructures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)ELECTRON MICROSCOPY6.277
2043J78|1|ETStructures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)ELECTRON MICROSCOPY6.377
2054V70|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)ELECTRON MICROSCOPY1772
2064V72|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)ELECTRON MICROSCOPY1372
2073JBO|1|7Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNAELECTRON MICROSCOPY5.875
2084V6R|1|ADStructural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)ELECTRON MICROSCOPY11.572
2094V6Q|1|ADStructural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)ELECTRON MICROSCOPY11.572
2104V78|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)ELECTRON MICROSCOPY2072
2114V73|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)ELECTRON MICROSCOPY1572
2124V75|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)ELECTRON MICROSCOPY1272
2134V76|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)ELECTRON MICROSCOPY1772
2143V11|1|DStructure of the ternary initiation complex AIF2:GDPNP:methionylated initiator TRNAX-RAY DIFFRACTION571
2153CW6|1|AE. coli Initiator tRNAX-RAY DIFFRACTION3.372
2163CW5|1|AE. coli Initiator tRNAX-RAY DIFFRACTION3.172
2172FMT|1|DMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.872
2182FMT|1|CMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.872
2193JCN|1|vStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex IELECTRON MICROSCOPY4.673
2203JCJ|1|vStructures of ribosome-bound initiation factor 2 reveal the mechanism of subunit associationELECTRON MICROSCOPY3.773
2213QSY|1|DRecognition of the methionylated initiator tRNA by the translation initiation factor 2 in ArchaeaX-RAY DIFFRACTION3.277
Copyright 2024 BGSU RNA group. Page generated in 0.0835 s