#IFEStandardized nameMoleculeOrganismDomainRfamTitleMethodÅDate
14TUD|1|QV (rep)Transfer RNAP-site tRNA-fMet, A-site ASL-SufJ, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.62015-05-13
24V9R|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION32014-07-09
34V9S|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
44TUA|1|QVTransfer RNAP-site tRNA-fMet, A-site ASL-Thr, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.62015-05-13
54P70|1|XVTransfer RNAP-site tRNA fMET, mRNA, A site ASL of tRNA-Proline CGG (unmodified)Escherichia coliBacteriaRF00005Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.682014-08-13
64V7B|1|AVTransfer RNAmodified formyl-methionine specific initiator transfer RNA, messenger RNAEscherichia coliBacteriaRF00005Visualization of two tRNAs trapped in transit during EF-G-mediated translocationELECTRON MICROSCOPY6.82014-07-09
74V5F|1|AVTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), MRNAEscherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.62014-07-09
84V9S|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
94V9R|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION32014-07-09
104V7M|1|AXTransfer RNAtRNA-Met, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliBacteriaRF00005The structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.452014-07-09
114V67|1|AYTransfer RNAP AND E-SITE TRNA(FMET), MRNAEscherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION32014-07-09
124V63|1|AYTransfer RNAP and E-site tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.212014-07-09
134V87|1|BCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.12014-07-09
144V8F|1|CCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.32014-07-09
154V9I|1|CVTransfer RNAP-SITE tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.32014-07-09
164V6A|1|CWTransfer RNAtRNA-Met, RNA (5'-R(P*AP*AP*AP*UP*G)-3')Escherichia coliBacteriaRF00005Structure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.12014-07-09
174V63|1|CYTransfer RNAP and E-site tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.212014-07-09
184V67|1|CYTransfer RNAP AND E-SITE TRNA(FMET), MRNAEscherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION32014-07-09
194V8C|1|DCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.32014-07-09
204TUB|1|QVTransfer RNAP-site tRNA f-Met, A-site tRNA Thr, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.62015-05-13
214TUB|1|XVTransfer RNAP-site tRNA f-Met, A-site tRNA Thr, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.62015-05-13
224TUD|1|XVTransfer RNAP-site tRNA-fMet, A-site ASL-SufJ, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.62015-05-13
234V5F|1|CVTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), MRNAEscherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.62014-07-09
244Z3S|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.652015-06-03
254V8B|1|ACTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION32014-07-09
264V67|1|AZTransfer RNAP AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION32014-07-09
274V63|1|AZTransfer RNAP and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.212014-07-09
284V8E|1|BCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.32014-07-09
294V8Q|1|BVTransfer RNAE-SITE or P-SITE TRNA FMET, MRNAEscherichia coliBacteriaRF00005Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
304V8B|1|CCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION32014-07-09
314V6G|1|CCTransfer RNATRNA FMET (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.52014-07-09
324V8C|1|CCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.32014-07-09
334V8J|1|CVTransfer RNAtRNA-fMet, tRNA-Phe, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.92014-07-09
344V63|1|CZTransfer RNAP and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.212014-07-09
354V67|1|CZTransfer RNAP AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION32014-07-09
364V8E|1|DCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.32014-07-09
374P70|1|QVTransfer RNAP-site tRNA fMET, mRNA, A site ASL of tRNA-Proline CGG (unmodified)Escherichia coliBacteriaRF00005Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.682014-08-13
384TUC|1|QVTransfer RNAP-site tRNA fMet, A-site ASL-SufJ, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.62015-05-13
394LT8|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL ProEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.142014-08-06
404P6F|1|XVTransfer RNAtRNA-fMet, E-Site tRNA-Phe or A-Site tRNA-Phe, mRNAEscherichia coliBacteriaRF00005Crystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.62014-10-01
414LT8|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL ProEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.142014-08-06
424LNT|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.942014-08-06
434Y4P|1|1xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.52015-03-18
444WRO|1|2KTransfer RNAtRNA-fMet, RNA (30-MER)Escherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.052015-06-10
454Z8C|1|2xTransfer RNAInitiator Methionine tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.92015-05-20
464Y4P|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.52015-03-18
473CW5|1|ATransfer RNAInitiator tRNAEscherichia coliBacteriaRF00005E. coli Initiator tRNAX-RAY DIFFRACTION3.12008-09-02
484W2G|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.552014-10-15
494W2F|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42014-10-15
504W2H|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.72014-10-15
514W2I|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.72014-10-15
521VY5|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.552014-08-20
531VY5|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.552014-08-20
544W2F|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42014-10-15
554W2I|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.72014-10-15
564W2G|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.552014-10-15
574V4Z|1|ACTransfer RNAtRNA fMET (unmodified bases), mRNAEscherichia coliBacteriaRF0000570S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.X-RAY DIFFRACTION4.512014-07-09
584V5C|1|AVTransfer RNAP-SITE TRNA FMET, MRNAEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.32014-07-09
594Z3S|1|2xTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.652015-06-03
601VY7|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.82014-08-20
611VY6|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.92014-08-20
621VY4|1|AXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.62014-08-20
631VY6|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.92014-08-20
644WPO|1|DXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.82015-01-28
654V8D|1|ACTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION32014-07-09
664V9I|1|AVTransfer RNAP-SITE tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.32014-07-09
674V6A|1|AWTransfer RNAtRNA-Met, RNA (5'-R(P*AP*AP*AP*UP*G)-3')Escherichia coliBacteriaRF00005Structure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.12014-07-09
684V87|1|CCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.12014-07-09
694V7M|1|CXTransfer RNARNA (77-MER), RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliBacteriaRF00005The structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.452014-07-09
703J5S|1|ETransfer RNAP-site tRNA FMetEscherichia coliBacteriaRF00005EttA binds to ribosome exit site and regulates translation by restricting ribosome and tRNA dynamicsELECTRON MICROSCOPY7.52014-01-08
713J78|1|ETTransfer RNAP/E-site initiator transfer RNAfMetEscherichia coliBacteriaRF00005Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)ELECTRON MICROSCOPY6.32014-08-06
723J77|1|PTTransfer RNAP/E-site initiator transfer RNAfMet, messenger RNAEscherichia coliBacteriaRF00005Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)ELECTRON MICROSCOPY6.22014-08-06
734LNT|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.942014-08-06
744P6F|1|QVTransfer RNAtRNA-fMet, E-Site tRNA-Phe or A-Site tRNA-Phe, mRNAEscherichia coliBacteriaRF00005Crystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.62014-10-01
754TUC|1|XVTransfer RNAP-site tRNA fMet, A-site ASL-SufJ, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.62015-05-13
764TUA|1|XVTransfer RNAP-site tRNA-fMet, A-site ASL-Thr, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.62015-05-13
774Z8C|1|1xTransfer RNAInitiator Methionine tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.92015-05-20
784ZER|1|1xTransfer RNAtRNA met, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.12015-05-20
794WQR|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.152015-06-10
804WSD|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.952015-06-10
814WT1|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.052015-06-10
824ZER|1|2xTransfer RNAtRNA met, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.12015-05-20
833CW6|1|ATransfer RNAInitiator tRNAEscherichia coliBacteriaRF00005E. coli Initiator tRNAX-RAY DIFFRACTION3.32008-09-02
844V6Y|1|A3Transfer RNAtRNA-fMet, 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'Escherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)ELECTRON MICROSCOPY122014-07-09
854V73|1|A3Transfer RNAtRNA-fMet, 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'Escherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)ELECTRON MICROSCOPY152014-07-09
864V6R|1|ADTransfer RNAP site tRNA, mRNAEscherichia coliBacteriaRF00005Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)ELECTRON MICROSCOPY11.52014-07-09
874WQY|1|BXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.82015-01-28
884V8D|1|CCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION32014-07-09
894V97|1|CVTransfer RNAP-SITE tRNA fMet, E-SITE TRNA PHE OR A-SITE tRNA Phe, mRNAEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.522014-07-09
903J78|1|PTTransfer RNAP/E-site initiator transfer RNAfMet, messenger RNAEscherichia coliBacteriaRF00005Structures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)ELECTRON MICROSCOPY6.32014-08-06
911VVJ|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.442014-08-06
924LSK|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.482014-08-06
934L71|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.92014-08-06
944LFZ|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.922014-08-06
954LEL|1|QVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.92014-08-06
964LFZ|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.922014-08-06
974LEL|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.92014-08-06
981VVJ|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.442014-08-06
994LSK|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.482014-08-06
1004L71|1|XVTransfer RNAP-site tRNA fMet, messenger RNA, A-site ASL SufA6Escherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.92014-08-06
1014WR6|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.052015-06-10
1024WPO|1|BXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.82015-01-28
1034V6G|1|CBTransfer RNATRNA FMET (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.52014-07-09
1044WQ1|1|2KTransfer RNAtRNA-fMET, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.12015-06-10
1054WQ1|1|2LTransfer RNAtRNA-fMET, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.12015-06-10
1064WSD|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.952015-06-10
1074V6Z|1|A3Transfer RNAtRNA-fMet, 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'Escherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)ELECTRON MICROSCOPY122014-07-09
1084V6P|1|ADTransfer RNAP site tRNA, mRNAEscherichia coliBacteriaRF00005Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)ELECTRON MICROSCOPY13.52014-07-09
1094V6O|1|ADTransfer RNAP site tRNA, mRNAEscherichia coliBacteriaRF00005Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)ELECTRON MICROSCOPY14.72014-07-09
1104W2H|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.72014-10-15
1114WQY|1|DXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.82015-01-28
1124V69|1|AVTransfer RNAE-site tRNA Phe, mRNAEscherichia coliBacteriaRF00005Ternary complex-bound E.coli 70S ribosome.ELECTRON MICROSCOPY6.72014-07-09
1134V51|1|AVTransfer RNAP-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.82014-07-09
1143DEG|1|BTransfer RNAP-tRNAEscherichia coliBacteriaRF00005Complex of elongating Escherichia coli 70S ribosome and EF4(LepA)-GMPPNPELECTRON MICROSCOPY10.92008-08-19
1154V51|1|CVTransfer RNAP-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54), E-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.82014-07-09
1164V5F|1|CWTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.62014-07-09
1174WRA|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.052015-06-10
1184WZO|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.32015-06-10
1194V6G|1|ACTransfer RNATRNA FMET (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.52014-07-09
1204V5K|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.22014-07-09
1214V97|1|AVTransfer RNAP-SITE tRNA fMet, E-SITE TRNA PHE OR A-SITE tRNA Phe, mRNAEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.522014-07-09
1224V7P|1|AWTransfer RNAP-site tRNA-fMet, messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')Escherichia coliBacteriaRF00005Recognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.622014-07-09
1234V7L|1|AXTransfer RNAtRNA-Met, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliBacteriaRF00005The structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION32014-07-09
1244V7P|1|DWTransfer RNAP-site tRNA-fMet, messenger RNA (5'-R(*AP*AP*UP*GP*UP*AP*G)-3')Escherichia coliBacteriaRF00005Recognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.622014-07-09
1251VY7|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.82014-08-20
1261VY4|1|CXTransfer RNAP-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.62014-08-20
1274WZO|1|1KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.32015-06-10
1284WZO|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.32015-06-10
1294V6V|1|A3Transfer RNAP-tRNA, mRNAEscherichia coliBacteriaRF00005Tetracycline resistance protein Tet(O) bound to the ribosomeELECTRON MICROSCOPY9.82014-07-09
1304V72|1|A3Transfer RNAtRNA-fMet, 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'Escherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)ELECTRON MICROSCOPY132014-07-09
1314V74|1|A3Transfer RNAtRNA-fMet, 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'Escherichia coliBacteriaRF0000570S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)ELECTRON MICROSCOPY172014-07-09
1324V71|1|A3Transfer RNAtRNA-fMet, 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'Escherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)ELECTRON MICROSCOPY202014-07-09
1334V70|1|A3Transfer RNAtRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)ELECTRON MICROSCOPY172014-07-09
1344V6Q|1|ADTransfer RNAP site tRNA, mRNAEscherichia coliBacteriaRF00005Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)ELECTRON MICROSCOPY11.52014-07-09
1354V6S|1|BCTransfer RNAP site tRNA, mRNAEscherichia coliBacteriaRF00005Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)ELECTRON MICROSCOPY13.12014-07-09
1362FMT|1|CTransfer RNAFORMYL-METHIONYL-TRNAFMET2synthetic constructSyntheticRF00005METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.81999-07-29
1372FMT|1|DTransfer RNAFORMYL-METHIONYL-TRNAFMET2synthetic constructSyntheticRF00005METHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.81999-07-29
1384V5C|1|CVTransfer RNAP-SITE TRNA FMET, MRNAEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.32014-07-09
1394WRA|1|2KTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.052015-06-10
1403J9Y|1|vTransfer RNAP-site fMet-tRNAfMet, mRNAEscherichia coliBacteriaRF00005Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.92015-04-15
1415AFI|1|vTransfer RNAP-site fMet-tRNAfMet, mRNAEscherichia coliBacteriaRF000052.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.92015-03-11
1424V8F|1|BCTransfer RNATRNA-FMET, MRNAEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.32014-07-09
1434V6G|1|CDTransfer RNATRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.52014-07-09
1444WRO|1|2LTransfer RNAtRNA-fMet, RNA (30-MER)Escherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.052015-06-10
1454V78|1|A3Transfer RNAtRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)ELECTRON MICROSCOPY202014-07-09
1464V77|1|A3Transfer RNAtRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)ELECTRON MICROSCOPY172014-07-09
1474V79|1|A3Transfer RNAtRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)ELECTRON MICROSCOPY152014-07-09
1484V4X|1|ACTransfer RNAtRNA fMET (unmodified bases)Escherichia coliBacteriaRF00005Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.X-RAY DIFFRACTION52014-07-09
1494V8J|1|AVTransfer RNAtRNA-fMet, tRNA-Phe, messenger RNAEscherichia coliBacteriaRF00005Crystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.92014-07-09
1504V5K|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.22014-07-09
1513V11|1|DTransfer RNAInitiator tRNAEscherichia coliBacteriaRF00005Structure of the ternary initiation complex AIF2:GDPNP:methionylated initiator TRNAX-RAY DIFFRACTION52012-03-28
1524WT1|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.052015-06-10
1534WQR|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.152015-06-10
1544V75|1|A3Transfer RNAtRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)ELECTRON MICROSCOPY122014-07-09
1554WR6|1|2LTransfer RNAtRNA-fMet, mRNAEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.052015-06-10
1564V76|1|A3Transfer RNAtRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)ELECTRON MICROSCOPY172014-07-09
1574V6G|1|ADTransfer RNATRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.52014-07-09
1584V7L|1|CXTransfer RNAtRNA-Met, RNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3')Escherichia coliBacteriaRF00005The structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION32014-07-09
1594V6N|1|BDTransfer RNAP site tRNA, mRNAEscherichia coliBacteriaRF00005Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)ELECTRON MICROSCOPY12.12014-07-09
1604V5F|1|AWTransfer RNAE-SITE TRNA FMET OR P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.62014-07-09
1614V8Q|1|BWTransfer RNAE-SITE or P-SITE TRNA FMETEscherichia coliBacteriaRF00005Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.12014-07-09
1624V8O|1|AVTransfer RNAPE HYBRID STATE TRNA FMET, MRNA 5'-R(*AP*AP*AP*AP*AP*AP*UP*GP*UP)-3'Escherichia coliBacteriaRF00005Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3X-RAY DIFFRACTION3.82014-07-09
1634V6T|1|AXTransfer RNAformyl-methionine specific initiator transfer RNAEscherichia coliBacteriaRF00005Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loadingELECTRON MICROSCOPY8.32014-07-09
1644V8C|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.32014-07-09
1654V8B|1|ADTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION32014-07-09
1664V87|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.12014-07-09
1674V8C|1|DDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.32014-07-09
1684V87|1|BDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.12014-07-09
1694V8B|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION32014-07-09
1705AFI|1|wTransfer RNAP-site fMet-tRNAfMetEscherichia coliBacteriaRF000052.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.92015-03-11
1713QSY|1|DTransfer RNAtRNAEscherichia coliBacteriaRF00005Recognition of the methionylated initiator tRNA by the translation initiation factor 2 in ArchaeaX-RAY DIFFRACTION3.22012-03-21
1724V5K|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.22014-07-09
1734V5K|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.22014-07-09
1741EG0|1|OTransfer RNAFORMYL-METHIONYL-TRNAEscherichia coliBacteriaRF00005FITTING OF COMPONENTS WITH KNOWN STRUCTURE INTO AN 11.5 A CRYO-EM MAP OF THE E.COLI 70S RIBOSOMEELECTRON MICROSCOPY11.52000-03-06

Release history

Release2.272.282.292.302.312.322.332.342.352.362.372.382.392.402.412.422.432.44
Date2015-06-122015-06-192015-06-262015-07-032015-07-102015-07-172015-07-242015-07-312015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-09

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_35542.9NR_2.5_35542.102.45(4) 4Y4P|1|1x, 4Y4P|1|2x, 4W2F|1|AX, 4W2F|1|CX(170) 4V8Q|1|BW, 4V8C|1|DC, 4V8C|1|CD, 4V8C|1|CC, 4V8B|1|CD, 4V8B|1|CC, 4V8B|1|AD, 4V8B|1|AC, 4V87|1|CD, 4V8C|1|DD, 4V8D|1|AC, 4V8D|1|CC, 4V8Q|1|BV, 4V8O|1|AV, 4V8J|1|CV, 4V8J|1|AV, 4V8F|1|CC, 4V8F|1|BC, 4V8E|1|DC, 4V8E|1|BC, 4V87|1|CC, 4V87|1|BD, 4V76|1|A3, 4V75|1|A3, 4V74|1|A3, 4V73|1|A3, 4V72|1|A3, 4V71|1|A3, 4V70|1|A3, 4V6Z|1|A3, 4V77|1|A3, 4V78|1|A3, 4V79|1|A3, 4V87|1|BC, 4V7P|1|DW, 4V7P|1|AW, 4V7M|1|CX, 4V7M|1|AX, 4V7L|1|CX, 4V7L|1|AX, 4V7B|1|AV, 4V6Y|1|A3, 4V97|1|AV, 5AFI|1|w, 4WT1|1|2K, 4WSD|1|2L, 4WSD|1|2K, 4WRO|1|2L, 4WRO|1|2K, 4WRA|1|2L, 4WRA|1|2K, 4WR6|1|2L, 4WT1|1|2L, 4WZO|1|1K, 4WZO|1|2K, 5AFI|1|v, 4ZER|1|2x, 4ZER|1|1x, 4Z8C|1|2x, 4Z8C|1|1x, 4Z3S|1|2x, 4Z3S|1|1x, 4WZO|1|2L, 4WR6|1|2K, 4WQY|1|DX, 4W2G|1|CX, 4W2G|1|AX, 4V9S|1|CX, 4V9S|1|AX, 4V9R|1|CX, 4V9R|1|AX, 4V9I|1|CV, 4V9I|1|AV, 4W2H|1|AX, 4W2H|1|CX, 4W2I|1|AX, 4WQY|1|BX, 4WQR|1|2L, 4WQR|1|2K, 4WQ1|1|2L, 4WQ1|1|2K, 4WPO|1|DX, 4WPO|1|BX, 4W2I|1|CX, 4V97|1|CV, 4TUB|1|QV, 4LNT|1|QV, 4LFZ|1|XV, 4LFZ|1|QV, 4LEL|1|XV, 4LEL|1|QV, 4L71|1|XV, 4L71|1|QV, 3V1(0)
NR_all_35542.9NR_20.0_35542.102.45(174) 4V8C|1|DD, 4V8D|1|AC, 4V8C|1|DC, 4V8D|1|CC, 4V8E|1|DC, 4V8E|1|BC, 4V8B|1|CD, 4V8B|1|CC, 4V8B|1|AD, 4V8C|1|CD, 4V8C|1|CC, 4V8B|1|AC, 4V9I|1|CV, 4V97|1|AV, 4V8Q|1|BW, 4V8Q|1|BV, 4V9I|1|AV, 4V97|1|CV, 4V8O|1|AV, 4V8J|1|AV, 4V8F|1|CC, 4V8F|1|BC, 4V8J|1|CV, 4V7B|1|AV, 4V77|1|A3, 4V76|1|A3, 4V75|1|A3, 4V78|1|A3, 4V79|1|A3, 4V72|1|A3, 4V71|1|A3, 4V70|1|A3, 4V74|1|A3, 4V73|1|A3, 4V87|1|BD, 4V87|1|BC, 4V7P|1|DW, 4V87|1|CC, 4V87|1|CD, 4V7M|1|AX, 4V7L|1|CX, 4V7L|1|AX, 4V7P|1|AW, 4V7M|1|CX, 4WZO|1|2L, 4WT1|1|2L, 4WT1|1|2K, 4WSD|1|2L, 4WZO|1|2K, 4WZO|1|1K, 4WSD|1|2K, 4WRA|1|2L, 4WRA|1|2K, 4WR6|1|2L, 4WRO|1|2K, 4WRO|1|2L, 5AFI|1|w, 4ZER|1|2x, 4ZER|1|1x, 4Z8C|1|2x, 4Z8C|1|1x, 5AFI|1|v, 4Y4P|1|2x, 4Y4P|1|1x, 4Z3S|1|2x, 4Z3S|1|1x, 4W2I|1|AX, 4W2G|1|CX, 4W2G|1|AX, 4W2F|1|CX, 4W2H|1|CX, 4W2H|1|AX, 4W2F|1|AX, 4V9R|1|CX, 4V9R|1|AX, 4V9S|1|AX, 4V9S|1|CX, 4WQY|1|BX, 4WQR|1|2L, 4WQR|1|2K, 4WR6|1|2K, 4WQY|1|DX, 4WQ1|1|2L, 4WPO|1|BX, 4W2I|1|CX, 4WPO|1|DX, 4WQ1|1|2K, 4LSK|1|XV, 4LNT|1|QV, 4LFZ|1|XV, 4LFZ|1|QV, 4LNT|1|XV, 4LSK|1|QV, 4L7(0) (6) 5D8B|1|XC, 3JBN|1|7, 3JBO|1|7, 5D8B|1|BD, 5D8B|1|ED, 5D8B|1|FD
NR_all_35542.9NR_3.0_35542.102.45(50) 1VY4|1|CX, 1VY5|1|AX, 1VY4|1|AX, 4V51|1|CV, 4V67|1|AY, 4V67|1|AZ, 4LNT|1|XV, 4V51|1|AV, 4V67|1|CZ, 4V7L|1|AX, 4V7L|1|CX, 4V67|1|CY, 1VY6|1|CX, 1VY6|1|AX, 1VY7|1|AX, 1VY5|1|CX, 2FMT|1|D, 4LNT|1|QV, 1VY7|1|CX, 2FMT|1|C, 4Z3S|1|2x, 4Z3S|1|1x, 4Z8C|1|1x, 4Y4P|1|2x, 5AFI|1|v, 5AFI|1|w, 4Z8C|1|2x, 4WQY|1|BX, 4WPO|1|DX, 4WQY|1|DX, 4WPO|1|BX, 4WSD|1|2L, 4Y4P|1|1x, 4WSD|1|2K, 4W2G|1|AX, 4W2F|1|CX, 4W2G|1|CX, 4W2F|1|AX, 4V9R|1|CX, 4W2I|1|AX, 4W2I|1|CX, 4W2H|1|AX, 4W2H|1|CX, 4V8B|1|CC, 4V8B|1|AD, 4V8B|1|CD, 4V8B|1|AC, 4V9R|1|AX, 4V8D|1|CC, 4V8D|1|AC(124) 4V9I|1|AV, 4V9I|1|CV, 4V9S|1|AX, 4V9S|1|CX, 4WQ1|1|2K, 4WQ1|1|2L, 4WQR|1|2K, 4WQR|1|2L, 4WR6|1|2K, 4V97|1|CV, 4V97|1|AV, 4V8E|1|BC, 4V8E|1|DC, 4V8F|1|BC, 4V8F|1|CC, 4V8J|1|AV, 4V8J|1|CV, 4V8O|1|AV, 4V8Q|1|BV, 4V8Q|1|BW, 4WR6|1|2L, 4WRA|1|2K, 4WRA|1|2L, 1VVJ|1|XV, 3CW5|1|A, 3CW6|1|A, 3DEG|1|B, 3J5S|1|E, 3J77|1|PT, 3J78|1|ET, 3J78|1|PT, 1VVJ|1|QV, 1EG0|1|O, 4ZER|1|2x, 4WRO|1|2K, 4WRO|1|2L, 4WT1|1|2K, 4WT1|1|2L, 4WZO|1|1K, 4WZO|1|2K, 4WZO|1|2L, 4ZER|1|1x, 3J9Y|1|v, 4V63|1|CY, 4V6P|1|AD, 4V6Q|1|AD, 4V6R|1|AD, 4V6S|1|BC, 4V6T|1|AX, 4V6V|1|A3, 4V6Y|1|A3, 4V6Z|1|A3, 4V6O|1|AD, 4V6N|1|BD, 4V6G|1|CD, 4V63|1|CZ, 4V69|1|AV, 4V6A|1|AW, 4V6A|1|CW, 4V6G|1|AC, 4V6G|1|AD, 4V6G|1|CB, 4V6G|1|CC, 4V70|1|A3, 4V71|1|A3, 4V72|1|A3, 4V7P|1|DW, 4V87|1|BC, 4V87|1|BD, 4V87|1|CC, 4V87|1|CD, 4V8C|1|CC, 4V8C|1|CD, 4V8C|1|DC, 4V7P|1|AW, 4V7M|1|CX, 4V7M|1|AX, 4V73|1|A3, 4V74|1|A3, 4V75|1|A3, 4V76|1|A3, 4V77|1|A3, 4V78|1|A3, 4V79|1|A3, 4V7B|1|AV, 4V8C|1|DD, 3QSY|1|D, 4P6F|1|QV, 4P6F|1|XV, 4P70|1|QV, 4P70|1|XV, 4TUA|1|QV, 4TUA|1|XV, 4TUB|1|Q(0)
NR_all_35542.9NR_3.5_35542.102.45(113) 4V5K|1|CW, 4V63|1|AY, 4V5K|1|AW, 4V5K|1|CV, 4V63|1|AZ, 4V63|1|CY, 4V5C|1|AV, 4V5C|1|CV, 4V51|1|CV, 4V5K|1|AV, 4V67|1|CZ, 4V6A|1|AW, 4V67|1|CY, 4V6A|1|CW, 4V6G|1|AC, 4V63|1|CZ, 4V67|1|AY, 4V67|1|AZ, 2FMT|1|D, 3CW5|1|A, 2FMT|1|C, 3CW6|1|A, 3QSY|1|D, 1VY6|1|AX, 1VY6|1|CX, 1VY5|1|CX, 1VY7|1|AX, 1VY7|1|CX, 4LT8|1|QV, 4LT8|1|XV, 4LSK|1|XV, 4V51|1|AV, 4LNT|1|QV, 4LNT|1|XV, 4LSK|1|QV, 4WRO|1|2L, 4WSD|1|2K, 4WRO|1|2K, 4WT1|1|2K, 4WT1|1|2L, 4WSD|1|2L, 4WR6|1|2L, 4WRA|1|2K, 4WR6|1|2K, 4WRA|1|2L, 4Y4P|1|2x, 4Z3S|1|1x, 4Y4P|1|1x, 4Z3S|1|2x, 4Z8C|1|1x, 4WZO|1|1K, 4WZO|1|2K, 4WZO|1|2L, 4W2H|1|AX, 4W2H|1|CX, 4W2G|1|CX, 4W2I|1|CX, 4WPO|1|BX, 4W2I|1|AX, 4W2F|1|AX, 4W2F|1|CX, 4V9S|1|CX, 4W2G|1|AX, 4WQR|1|2L, 4WQY|1|BX, 4WQR|1|2K, 4WQY|1|DX, 4WPO|1|DX, 4WQ1|1|2K, 4WQ1|1|2L, 1VY4|1|CX, 1VY5|1|AX, 1VY4|1|AX, 1VVJ|1|QV, 1VVJ|1|XV, 4V8D|1|CC, 4V8E|1|BC, 4V8E|1|DC, 4V8D|1|AC, 4V8F|1|BC, 4V8F|1|CC, 4V8C|1|CD, 4V8C|1|DC, 4V8C|1|CC, 4V8C|1|DD, 4V9R|1|AX, 4V9R|1|CX, 4V9I|1|CV, 4V9S|1|AX, 4V8Q|1|BV, 4V8Q|1|BW, 4V9I|1|AV, 4V7L|1|CX, 4V7M|1(61) 3J77|1|PT, 4TUB|1|QV, 4TUB|1|XV, 4TUC|1|QV, 4TUC|1|XV, 4TUD|1|QV, 4TUD|1|XV, 4V4X|1|AC, 4V4Z|1|AC, 4V5F|1|AV, 4V5F|1|AW, 4V5F|1|CV, 4V5F|1|CW, 4V69|1|AV, 4V6N|1|BD, 4TUA|1|XV, 4TUA|1|QV, 3J78|1|ET, 3J78|1|PT, 3J9Y|1|v, 3V11|1|D, 4L71|1|QV, 4L71|1|XV, 4LEL|1|QV, 4LEL|1|XV, 4LFZ|1|QV, 4LFZ|1|XV, 4P6F|1|QV, 4P6F|1|XV, 4P70|1|QV, 4P70|1|XV, 4V6O|1|AD, 4V6P|1|AD, 4V79|1|A3, 4V7B|1|AV, 4V7P|1|AW, 4V7P|1|DW, 4V8J|1|AV, 4V8J|1|CV, 4V8O|1|AV, 4V97|1|AV, 4V97|1|CV, 1EG0|1|O, 3DEG|1|B, 3J5S|1|E, 4V78|1|A3, 4V77|1|A3, 4V6Q|1|AD, 4V6R|1|AD, 4V6S|1|BC, 4V6T|1|AX, 4V6V|1|A3, 4V6Y|1|A3, 4V6Z|1|A3, 4V70|1|A3, 4V71|1|A3, 4V72|1|A3, 4V73|1|A3, 4V74|1|A3, 4V75|1|A3, 4V76|1|A3(0)
NR_all_35542.9NR_4.0_35542.102.45(143) 1VY7|1|CX, 1VY7|1|AX, 2FMT|1|C, 1VY6|1|CX, 3CW5|1|A, 3CW6|1|A, 2FMT|1|D, 1VY6|1|AX, 1VY4|1|AX, 1VVJ|1|XV, 1VY4|1|CX, 1VVJ|1|QV, 1VY5|1|CX, 1VY5|1|AX, 4LSK|1|QV, 4LSK|1|XV, 4LT8|1|QV, 4LNT|1|QV, 4LNT|1|XV, 4P6F|1|XV, 4P6F|1|QV, 4P70|1|QV, 4LT8|1|XV, 4L71|1|QV, 4L71|1|XV, 4LEL|1|QV, 3J9Y|1|v, 3QSY|1|D, 4LFZ|1|QV, 4LFZ|1|XV, 4LEL|1|XV, 4Z8C|1|2x, 4ZER|1|1x, 4Z8C|1|1x, 4Z3S|1|2x, 5AFI|1|v, 5AFI|1|w, 4ZER|1|2x, 4WZO|1|2L, 4Y4P|1|1x, 4WZO|1|2K, 4WZO|1|1K, 4Z3S|1|1x, 4Y4P|1|2x, 4V67|1|CY, 4V67|1|AZ, 4V67|1|CZ, 4V67|1|AY, 4V63|1|CZ, 4V6G|1|AC, 4V6G|1|AD, 4V6A|1|CW, 4V6G|1|CB, 4V6A|1|AW, 4V5K|1|AW, 4V5K|1|CV, 4V5K|1|CW, 4V5F|1|CW, 4V5K|1|AV, 4V63|1|CY, 4V63|1|AZ, 4V63|1|AY, 4WRO|1|2L, 4WRO|1|2K, 4WSD|1|2K, 4WRA|1|2K, 4WRA|1|2L, 4WT1|1|2L, 4WT1|1|2K, 4WSD|1|2L, 4WQR|1|2K, 4WQR|1|2L, 4WQY|1|BX, 4WQ1|1|2K, 4WQ1|1|2L, 4WR6|1|2K, 4WR6|1|2L, 4WQY|1|DX, 4W2H|1|AX, 4W2G|1|CX, 4W2H|1|CX, 4W2G|1|AX, 4W2F|1|CX, 4WPO|1|BX, 4WPO|1|DX, 4W2I|1|AX, 4W2I|1|CX, 4V9R|1|AX, 4V9I|1|CV, 4V9R|1|CX, 4V97|1|CV, 4V9I|1|AV, 4W2F|1|AX, 4V9S|1|CX(31) 4V6O|1|AD, 4V6N|1|BD, 4V69|1|AV, 4V4Z|1|AC, 4V4X|1|AC, 4V6P|1|AD, 4V6Q|1|AD, 4V6R|1|AD, 4V6S|1|BC, 4V6T|1|AX, 4V6V|1|A3, 4V6Y|1|A3, 3V11|1|D, 3J78|1|PT, 3J78|1|ET, 4V74|1|A3, 4V75|1|A3, 4V76|1|A3, 4V77|1|A3, 4V78|1|A3, 4V79|1|A3, 4V7B|1|AV, 1EG0|1|O, 3DEG|1|B, 3J5S|1|E, 3J77|1|PT, 4V73|1|A3, 4V6Z|1|A3, 4V70|1|A3, 4V71|1|A3, 4V72|1|A3(4) 5D8B|1|ED, 5D8B|1|BD, 5D8B|1|FD, 5D8B|1|XC
NR_all_35542.9NR_all_35542.102.45(174) 4V63|1|AY, 4V5K|1|CW, 4V63|1|AZ, 4V63|1|CY, 4V5K|1|AW, 4V5K|1|CV, 4V5K|1|AV, 4V67|1|AZ, 4V67|1|CY, 4V67|1|CZ, 4V69|1|AV, 4V63|1|CZ, 4V67|1|AY, 4TUD|1|XV, 4V51|1|AV, 4V51|1|CV, 4V5C|1|AV, 4V4X|1|AC, 4V4Z|1|AC, 4V5C|1|CV, 4V5F|1|CV, 4V5F|1|CW, 4V5F|1|AW, 4V5F|1|AV, 4V6R|1|AD, 4V6V|1|A3, 4V6Y|1|A3, 4V6Z|1|A3, 4V6T|1|AX, 4V6S|1|BC, 4V72|1|A3, 4V73|1|A3, 4V74|1|A3, 4V75|1|A3, 4V70|1|A3, 4V71|1|A3, 4V6G|1|AC, 4V6G|1|AD, 4V6G|1|CB, 4V6A|1|AW, 4V6A|1|CW, 4V6G|1|CC, 4V6O|1|AD, 4V6P|1|AD, 4V6Q|1|AD, 4V6G|1|CD, 4V6N|1|BD, 2FMT|1|C, 3CW6|1|A, 3DEG|1|B, 3J5S|1|E, 2FMT|1|D, 3CW5|1|A, 3J77|1|PT, 3J9Y|1|v, 3QSY|1|D, 3V11|1|D, 3J78|1|ET, 3J78|1|PT, 1EG0|1|O, 1VY4|1|AX, 1VY4|1|CX, 1VY5|1|AX, 1VVJ|1|XV, 1VVJ|1|QV, 1VY6|1|CX, 1VY7|1|AX, 1VY7|1|CX, 1VY5|1|CX, 1VY6|1|AX, 4L71|1|QV, 4LT8|1|XV, 4P70|1|QV, 4P70|1|XV, 4TUA|1|QV, 4TUA|1|XV, 4P6F|1|QV, 4P6F|1|XV, 4TUC|1|QV, 4TUC|1|XV, 4TUD|1|QV, 4TUB|1|QV, 4TUB|1|XV, 4LEL|1|XV, 4LFZ|1|QV, 4LFZ|1|XV, 4LEL|1|QV, 4L71|1|XV, 4LNT|1|QV, 4LSK|1|XV, 4LT8|1|QV, 4LSK|1|QV, 4LNT|1|XV, 4WPO|1|BX, (0) (6) 5D8B|1|XC, 5D8B|1|FD, 5D8B|1|ED, 5D8B|1|BD, 3JBO|1|7, 3JBN|1|7

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
11EG0|1|OFITTING OF COMPONENTS WITH KNOWN STRUCTURE INTO AN 11.5 A CRYO-EM MAP OF THE E.COLI 70S RIBOSOMEELECTRON MICROSCOPY11.571
24V79|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b)ELECTRON MICROSCOPY1572
34V6O|1|ADStructural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes)ELECTRON MICROSCOPY14.772
44V6N|1|BDStructural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes)ELECTRON MICROSCOPY12.172
54V6S|1|BCStructural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)ELECTRON MICROSCOPY13.172
64V6V|1|A3Tetracycline resistance protein Tet(O) bound to the ribosomeELECTRON MICROSCOPY9.872
74V6G|1|ACInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
84V8C|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
94V87|1|BCCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
104V8B|1|ACCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
114V6G|1|CCInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
124V8C|1|DCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
134V87|1|CCCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
144V8B|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
154WRA|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.0573
164WT1|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
174WRO|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
184WSD|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9572
194WZO|1|2LComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.373
204ZER|1|1xCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.172
214W2H|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.772
224Y4P|1|1xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.572
234W2F|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.472
241VY6|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.971
251VY7|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.871
261VY4|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.671
271VY5|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5572
284W2G|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5572
294WPO|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.871
304WQY|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.872
314V9R|1|AXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
324V9S|1|AXCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.176
334W2I|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.772
344Z3S|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6571
354Z8C|1|1xCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.972
364Z8C|1|2xCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.972
374ZER|1|2xCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.172
384V5K|1|AVStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
395AFI|1|v2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.973
403J9Y|1|vCryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosomeELECTRON MICROSCOPY3.973
414V8F|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.377
424V8D|1|CCStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
434WQR|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1572
444WR6|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.0572
454WQ1|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.172
464WQR|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1572
474WT1|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
484WR6|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.0571
494WSD|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9572
504V8E|1|DCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.377
514V8E|1|BCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.377
524WQ1|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.172
534WRO|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
544V8D|1|ACStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
554V8F|1|BCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.377
564WRA|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.0573
574WZO|1|2KComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.372
584V5C|1|CVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
591VY7|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.871
604Z3S|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6571
614W2I|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.772
624V9R|1|CXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
634V9S|1|CXCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.176
644W2H|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.772
654WQY|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.872
664WPO|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.871
671VY4|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.671
681VY5|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5572
691VY6|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.971
704W2G|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5572
714W2F|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.472
724Y4P|1|2xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.572
734TUD|1|XVCrystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
744TUC|1|XVCrystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
754V7M|1|AXThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4577
764V5C|1|AVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
774V7M|1|CXThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4577
784V7L|1|AXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
794V7L|1|CXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
804P70|1|XVCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.6877
814TUC|1|QVCrystal structure of ASL-SufJ bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
824TUA|1|XVCrystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
834TUB|1|XVCrystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
844TUA|1|QVCrystal structure of ASL-Thr bound to Codon ACC-A on the RibosomeX-RAY DIFFRACTION3.677
854TUD|1|QVCrystal structure of ASL-SufJ bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
864LT8|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.1477
874TUB|1|QVCrystal structure of tRNA-Thr bound to Codon ACC-C on the RibosomeX-RAY DIFFRACTION3.677
884V9I|1|AVCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.377
894V51|1|CVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
903DEG|1|BComplex of elongating Escherichia coli 70S ribosome and EF4(LepA)-GMPPNPELECTRON MICROSCOPY10.976
914V51|1|AVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
924V9I|1|CVCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.377
934LNT|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
944P6F|1|QVCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.677
954P6F|1|XVCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.677
964LNT|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
974LT8|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.1477
984LSK|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.4877
994LFZ|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.9277
1004LEL|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.977
1014LEL|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.977
1024L71|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.977
1034LSK|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.4877
1041VVJ|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.4477
1054L71|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.977
1064LFZ|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.9277
1071VVJ|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.4477
1084P70|1|QVCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.6877
1094V6A|1|AWStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.177
1104V8J|1|AVCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.977
1114V97|1|CVCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.5277
1124V97|1|AVCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.5277
1134V8J|1|CVCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.977
1144V6A|1|CWStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.177
1154V67|1|CYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1164V67|1|AYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1174V7P|1|AWRecognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.6277
1184V7P|1|DWRecognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.6277
1194V63|1|AYStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1204V63|1|CYStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1214V8Q|1|BVComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.177
1224V5F|1|CVThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
1234V5F|1|AVThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
1244V7B|1|AVVisualization of two tRNAs trapped in transit during EF-G-mediated translocationELECTRON MICROSCOPY6.876
1254V5K|1|CVStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
1263J78|1|PTStructures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)ELECTRON MICROSCOPY6.377
1273J5S|1|EEttA binds to ribosome exit site and regulates translation by restricting ribosome and tRNA dynamicsELECTRON MICROSCOPY7.577
1284V69|1|AVTernary complex-bound E.coli 70S ribosome.ELECTRON MICROSCOPY6.776
1294V4Z|1|AC70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.X-RAY DIFFRACTION4.5176
1304V4X|1|ACCrystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.X-RAY DIFFRACTION576
1314WZO|1|1KComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.368
1324V6G|1|CBInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.565
1334V6Y|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)ELECTRON MICROSCOPY1272
1344V6Z|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)ELECTRON MICROSCOPY1272
1354V71|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2)ELECTRON MICROSCOPY2072
1364V77|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b)ELECTRON MICROSCOPY1772
1374V6P|1|ADStructural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes)ELECTRON MICROSCOPY13.572
1384V74|1|A370S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)ELECTRON MICROSCOPY1772
1394V70|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)ELECTRON MICROSCOPY1772
1404V72|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)ELECTRON MICROSCOPY1372
1414V73|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)ELECTRON MICROSCOPY1572
1424V75|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1)ELECTRON MICROSCOPY1272
1434V76|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a)ELECTRON MICROSCOPY1772
1444V6R|1|ADStructural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes)ELECTRON MICROSCOPY11.572
1454V6Q|1|ADStructural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes)ELECTRON MICROSCOPY11.572
1464V78|1|A3E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a)ELECTRON MICROSCOPY2072
1474V8O|1|AVCrystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3X-RAY DIFFRACTION3.877
1484V6T|1|AXStructure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loadingELECTRON MICROSCOPY8.377
1493J77|1|PTStructures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class II - rotated ribosome with 1 tRNA)ELECTRON MICROSCOPY6.277
1503J78|1|ETStructures of yeast 80S ribosome-tRNA complexes in the rotated and non-rotated conformations (Class I - non-rotated ribosome with 2 tRNAs)ELECTRON MICROSCOPY6.377
1515AFI|1|w2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.973
1524V5F|1|CWThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
1534V5F|1|AWThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.676
1544V8Q|1|BWComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.177
1554V63|1|CZStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1564V63|1|AZStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1574V67|1|AZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1584V67|1|CZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1594V6G|1|CDInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
1604V87|1|BDCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
1614V8B|1|ADCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
1624V8C|1|CDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
1634V8C|1|DDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
1644V8B|1|CDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
1654V87|1|CDCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
1664V6G|1|ADInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
1674V5K|1|AWStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
1684V5K|1|CWStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
1693V11|1|DStructure of the ternary initiation complex AIF2:GDPNP:methionylated initiator TRNAX-RAY DIFFRACTION571
1703CW5|1|AE. coli Initiator tRNAX-RAY DIFFRACTION3.172
1713CW6|1|AE. coli Initiator tRNAX-RAY DIFFRACTION3.372
1722FMT|1|DMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.872
1732FMT|1|CMETHIONYL-TRNAFMET FORMYLTRANSFERASE COMPLEXED WITH FORMYL-METHIONYL-TRNAFMETX-RAY DIFFRACTION2.872
1743QSY|1|DRecognition of the methionylated initiator tRNA by the translation initiation factor 2 in ArchaeaX-RAY DIFFRACTION3.277