BGSU RNA Site //

Equivalence class NR_all_35677.2 Obsolete

#IFEStandardized nameMoleculeOrganismDomainRfamTitleMethodÅDate
17KGB|1|A (rep)Large subunit ribosomal RNA23S rRNAMycobacterium tuberculosis H37RvBacteriaRF02541CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9ELECTRON MICROSCOPY2.72022-01-19
27MT7|1|ALarge subunit ribosomal RNA23S rRNAMycobacterium tuberculosis H37RvBacteriaRF02541Mtb 70S with P and E site tRNAsELECTRON MICROSCOPY2.712022-02-02
37MT2|1|ALarge subunit ribosomal RNA23S rRNAMycobacterium tuberculosis H37RvBacteriaRF02541Mtb 70S initiation complexELECTRON MICROSCOPY2.762022-02-02
47MSM|1|ALarge subunit ribosomal RNA23S rRNAMycobacterium tuberculosis H37RvBacteriaRF02541Mtb 70SIC in complex with MtbEttA at Trans_R0 stateELECTRON MICROSCOPY2.792022-02-02
57MT3|1|ALarge subunit ribosomal RNA23S rRNAMycobacterium tuberculosis H37RvBacteriaRF02541Mtb 70S with P/E tRNAELECTRON MICROSCOPY2.82022-02-02
67MSC|1|ALarge subunit ribosomal RNA23S rRNAMycobacterium tuberculosis H37RvBacteriaRF02541Mtb 70SIC in complex with MtbEttA at Pre_R0 stateELECTRON MICROSCOPY2.972022-02-02
77MSZ|1|ALarge subunit ribosomal RNA23S rRNAMycobacterium tuberculosis H37RvBacteriaRF02541Mtb 70SIC in complex with MtbEttA at Trans_R1 stateELECTRON MICROSCOPY3.12022-02-02
87MSH|1|ALarge subunit ribosomal RNA23S rRNAMycobacterium tuberculosis H37RvBacteriaRF02541Mtb 70SIC in complex with MtbEttA at Pre_R1 stateELECTRON MICROSCOPY3.232022-02-02
97F0D|1|ALarge subunit ribosomal RNA23S rRNAMycobacterium tuberculosis H37RaBacteriaRF02541Cryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycinELECTRON MICROSCOPY3.32022-06-29
105V7Q|1|ALarge subunit ribosomal RNA23S rRNAMycobacterium tuberculosisBacteriaRF02541Cryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analogELECTRON MICROSCOPY3.72017-09-20
115V93|1|ALarge subunit ribosomal RNA23S rRNAMycobacterium tuberculosisBacteriaRF02541Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with CapreomycinELECTRON MICROSCOPY42017-09-20

Release history

Release3.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.251
Date2022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-05

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_35677.2NR_all_35677.13.237(10) 7MT3|1|A, 7MT2|1|A, 7MSZ|1|A, 7MSM|1|A, 7MSH|1|A, 7MSC|1|A, 7KGB|1|A, 5V93|1|A, 5V7Q|1|A, 7MT7|1|A(1) 7F0D|1|A(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_35677.2NR_all_35677.33.252(11) 7MSZ|1|A, 7MSM|1|A, 7MSH|1|A, 7MSC|1|A, 7KGB|1|A, 7F0D|1|A, 5V93|1|A, 5V7Q|1|A, 7MT7|1|A, 7MT3|1|A, 7MT2|1|A(0) (1) 7SFR|1|A

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
17MT3|1|AMtb 70S with P/E tRNAELECTRON MICROSCOPY2.83116
25V93|1|ACryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with CapreomycinELECTRON MICROSCOPY43118
37KGB|1|ACryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9ELECTRON MICROSCOPY2.73112
47MT7|1|AMtb 70S with P and E site tRNAsELECTRON MICROSCOPY2.713116
57MSC|1|AMtb 70SIC in complex with MtbEttA at Pre_R0 stateELECTRON MICROSCOPY2.973116
67MSM|1|AMtb 70SIC in complex with MtbEttA at Trans_R0 stateELECTRON MICROSCOPY2.793116
77MT2|1|AMtb 70S initiation complexELECTRON MICROSCOPY2.763115
87MSZ|1|AMtb 70SIC in complex with MtbEttA at Trans_R1 stateELECTRON MICROSCOPY3.13116
97MSH|1|AMtb 70SIC in complex with MtbEttA at Pre_R1 stateELECTRON MICROSCOPY3.233116
105V7Q|1|ACryo-EM structure of the large ribosomal subunit from Mycobacterium tuberculosis bound with a potent linezolid analogELECTRON MICROSCOPY3.73118
117F0D|1|ACryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycinELECTRON MICROSCOPY3.33119