#IFECompound(s)RNA source organismTitleMethodResolutionDate
12R8S|1|R (rep)P4-P6 RNA RIBOZYME DOMAINHigh resolution structure of a specific synthetic FAB bound to P4-P6 RNA ribozyme domainX-RAY DIFFRACTION1.952007-12-04
26D8O|1|AGroup I self-splicing intronTetrahymena thermophilaGroup I self-splicing intron P4-P6 domain mutant A230UX-RAY DIFFRACTION2.82018-07-04
36D8O|1|BGroup I self-splicing intronTetrahymena thermophilaGroup I self-splicing intron P4-P6 domain mutant A230UX-RAY DIFFRACTION2.82018-07-04
41HR2|1|BP4-P6 DELC209 MUTANT RNA RIBOZYME DOMAINCRYSTAL STRUCTURE ANALYSIS OF A MUTANT P4-P6 DOMAIN (DELC209) OF TETRAHYMENA THEMOPHILA GROUP I INTRON.X-RAY DIFFRACTION2.252001-04-12
56BJX|1|AGroup I self-splicing intron P4-P6 domainTetrahymena thermophilaGroup I self-splicing intron P4-P6 domain mutant U131A (with isopropanol soaking)X-RAY DIFFRACTION3.142018-07-04
66BJX|1|BGroup I self-splicing intron P4-P6 domainTetrahymena thermophilaGroup I self-splicing intron P4-P6 domain mutant U131A (with isopropanol soaking)X-RAY DIFFRACTION3.142018-07-04
71HR2|1|AP4-P6 DELC209 MUTANT RNA RIBOZYME DOMAINCRYSTAL STRUCTURE ANALYSIS OF A MUTANT P4-P6 DOMAIN (DELC209) OF TETRAHYMENA THEMOPHILA GROUP I INTRON.X-RAY DIFFRACTION2.252001-04-12
86D8M|1|BGroup I self-splicing intronTetrahymena thermophilaGroup I self-splicing intron P4-P6 domain mutant A125U/G126UX-RAY DIFFRACTION3.72018-07-04
96D8M|1|AGroup I self-splicing intronTetrahymena thermophilaGroup I self-splicing intron P4-P6 domain mutant A125U/G126UX-RAY DIFFRACTION3.72018-07-04
101X8W|1|ATetrahymena ribozyme RNAStructure of the Tetrahymena Ribozyme: Base Triple Sandwich and Metal Ion at the Active SiteX-RAY DIFFRACTION3.82004-11-09
111X8W|1|DTetrahymena ribozyme RNAStructure of the Tetrahymena Ribozyme: Base Triple Sandwich and Metal Ion at the Active SiteX-RAY DIFFRACTION3.82004-11-09
121X8W|1|BTetrahymena ribozyme RNAStructure of the Tetrahymena Ribozyme: Base Triple Sandwich and Metal Ion at the Active SiteX-RAY DIFFRACTION3.82004-11-09
131X8W|1|CTetrahymena ribozyme RNAStructure of the Tetrahymena Ribozyme: Base Triple Sandwich and Metal Ion at the Active SiteX-RAY DIFFRACTION3.82004-11-09
141L8V|1|BP4-P6 RNA ribozyme domainCrystal Structure of a Mutant (C109G,G212C) P4-P6 Domain of the Group I Intron from Tetrahymena ThermophiliaX-RAY DIFFRACTION2.82002-08-23
151L8V|1|AP4-P6 RNA ribozyme domainCrystal Structure of a Mutant (C109G,G212C) P4-P6 Domain of the Group I Intron from Tetrahymena ThermophiliaX-RAY DIFFRACTION2.82002-08-23
161GID|1|BP4-P6 RNA RIBOZYME DOMAINsynthetic constructCRYSTAL STRUCTURE OF A GROUP I RIBOZYME DOMAIN: PRINCIPLES OF RNA PACKINGX-RAY DIFFRACTION2.51996-12-31
171GID|1|AP4-P6 RNA RIBOZYME DOMAINsynthetic constructCRYSTAL STRUCTURE OF A GROUP I RIBOZYME DOMAIN: PRINCIPLES OF RNA PACKINGX-RAY DIFFRACTION2.51996-12-31
181GRZ|1|ALSU R-RNA GROUP I INTRONTetrahymena thermophilaA PREORGANIZED ACTIVE SITE IN THE CRYSTAL STRUCTURE OF THE TETRAHYMENA RIBOZYMEX-RAY DIFFRACTION51998-11-24
191GRZ|1|BLSU R-RNA GROUP I INTRONTetrahymena thermophilaA PREORGANIZED ACTIVE SITE IN THE CRYSTAL STRUCTURE OF THE TETRAHYMENA RIBOZYMEX-RAY DIFFRACTION51998-11-24

Release history

Release3.293.30
Date2018-07-062018-07-13

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_39627.2NR_all_39627.13.29(13) 1X8W|1|A, 1GRZ|1|B, 1GRZ|1|A, 1L8V|1|B, 2R8S|1|R, 1GID|1|B, 1L8V|1|A, 1X8W|1|D, 1GID|1|A, 1HR2|1|B, 1X8W|1|C, 1HR2|1|A, 1X8W|1|B(6) 6D8O|1|A, 6D8M|1|A, 6D8M|1|B, 6BJX|1|B, 6BJX|1|A, 6D8O|1|B(0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16D8M|1|AGroup I self-splicing intron P4-P6 domain mutant A125U/G126UX-RAY DIFFRACTION3.7158
21X8W|1|CStructure of the Tetrahymena Ribozyme: Base Triple Sandwich and Metal Ion at the Active SiteX-RAY DIFFRACTION3.8237
36D8O|1|AGroup I self-splicing intron P4-P6 domain mutant A230UX-RAY DIFFRACTION2.8158
41L8V|1|BCrystal Structure of a Mutant (C109G,G212C) P4-P6 Domain of the Group I Intron from Tetrahymena ThermophiliaX-RAY DIFFRACTION2.8157
51L8V|1|ACrystal Structure of a Mutant (C109G,G212C) P4-P6 Domain of the Group I Intron from Tetrahymena ThermophiliaX-RAY DIFFRACTION2.8157
61HR2|1|BCRYSTAL STRUCTURE ANALYSIS OF A MUTANT P4-P6 DOMAIN (DELC209) OF TETRAHYMENA THEMOPHILA GROUP I INTRON.X-RAY DIFFRACTION2.25158
71GID|1|BCRYSTAL STRUCTURE OF A GROUP I RIBOZYME DOMAIN: PRINCIPLES OF RNA PACKINGX-RAY DIFFRACTION2.5158
81GID|1|ACRYSTAL STRUCTURE OF A GROUP I RIBOZYME DOMAIN: PRINCIPLES OF RNA PACKINGX-RAY DIFFRACTION2.5158
91HR2|1|ACRYSTAL STRUCTURE ANALYSIS OF A MUTANT P4-P6 DOMAIN (DELC209) OF TETRAHYMENA THEMOPHILA GROUP I INTRON.X-RAY DIFFRACTION2.25157
106D8M|1|BGroup I self-splicing intron P4-P6 domain mutant A125U/G126UX-RAY DIFFRACTION3.7159
112R8S|1|RHigh resolution structure of a specific synthetic FAB bound to P4-P6 RNA ribozyme domainX-RAY DIFFRACTION1.95159
121X8W|1|AStructure of the Tetrahymena Ribozyme: Base Triple Sandwich and Metal Ion at the Active SiteX-RAY DIFFRACTION3.8242
131X8W|1|BStructure of the Tetrahymena Ribozyme: Base Triple Sandwich and Metal Ion at the Active SiteX-RAY DIFFRACTION3.8247
141X8W|1|DStructure of the Tetrahymena Ribozyme: Base Triple Sandwich and Metal Ion at the Active SiteX-RAY DIFFRACTION3.8242
151GRZ|1|AA PREORGANIZED ACTIVE SITE IN THE CRYSTAL STRUCTURE OF THE TETRAHYMENA RIBOZYMEX-RAY DIFFRACTION5247
161GRZ|1|BA PREORGANIZED ACTIVE SITE IN THE CRYSTAL STRUCTURE OF THE TETRAHYMENA RIBOZYMEX-RAY DIFFRACTION5247
176D8O|1|BGroup I self-splicing intron P4-P6 domain mutant A230UX-RAY DIFFRACTION2.8158
186BJX|1|BGroup I self-splicing intron P4-P6 domain mutant U131A (with isopropanol soaking)X-RAY DIFFRACTION3.14158
196BJX|1|AGroup I self-splicing intron P4-P6 domain mutant U131A (with isopropanol soaking)X-RAY DIFFRACTION3.14158