BGSU RNA Site //

Equivalence class NR_all_41610.5 Obsolete

#IFEStandardized nameMoleculeOrganismDomainRfamTitleMethodÅDate
16HA1|1|A (rep)Large subunit ribosomal RNA23S ribosomal RNABacillus subtilisBacteriaRF02541Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycinELECTRON MICROSCOPY3.12018-08-29
26HA8|1|ALarge subunit ribosomal RNA23S rRNABacillus subtilisBacteriaRF02541Cryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosomeELECTRON MICROSCOPY3.52018-08-29
35NJT|1|ULarge subunit ribosomal RNA23S ribosomal RNABacillus subtilisBacteriaRF02541Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.ELECTRON MICROSCOPY3.82017-06-14
43J9W|1|BALarge subunit ribosomal RNA23S ribosomal RNABacillus subtilisBacteriaRF02541Cryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complexELECTRON MICROSCOPY3.92015-04-29
56PPF|1|ALarge subunit ribosomal RNA23S rRNABacillus subtilisBacteriaRF02541Bacterial 45SRbgA ribosomal particle class BELECTRON MICROSCOPY3.42019-09-18
66PVK|1|ALarge subunit ribosomal RNA23S rRNABacillus subtilisBacteriaRF02541Bacterial 45SRbgA ribosomal particle class AELECTRON MICROSCOPY3.42019-09-18
76PPK|1|ALarge subunit ribosomal RNA23S rRNABacillus subtilisBacteriaRF02541RbgA+45SRbgA complexELECTRON MICROSCOPY4.42019-09-18
83J3W|1|ALarge subunit ribosomal RNAribosome RNA 23SBacillus subtilisBacteriaRF02541Atomic model of the immature 50S subunit from Bacillus subtilis (state II-a)ELECTRON MICROSCOPY10.72013-06-12
93J3V|1|ALarge subunit ribosomal RNAribosome RNA 23SBacillus subtilisBacteriaRF02541Atomic model of the immature 50S subunit from Bacillus subtilis (state I-a)ELECTRON MICROSCOPY13.32013-06-12

Release history

Release3.923.933.943.953.96
Date2019-09-192019-09-252019-10-032019-10-092019-10-16

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_41610.5NR_all_41610.43.92(6) 6HA8|1|A, 6HA1|1|A, 5NJT|1|U, 3J9W|1|BA, 3J3W|1|A, 3J3V|1|A(3) 6PVK|1|A, 6PPK|1|A, 6PPF|1|A(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_41610.5NR_all_41610.63.97(9) 5NJT|1|U, 3J9W|1|BA, 3J3W|1|A, 3J3V|1|A, 6PVK|1|A, 6PPK|1|A, 6PPF|1|A, 6HA8|1|A, 6HA1|1|A(0) (1) 6HTQ|1|A

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13J3W|1|AAtomic model of the immature 50S subunit from Bacillus subtilis (state II-a)ELECTRON MICROSCOPY10.72685
26PVK|1|ABacterial 45SRbgA ribosomal particle class AELECTRON MICROSCOPY3.42169
36PPF|1|ABacterial 45SRbgA ribosomal particle class BELECTRON MICROSCOPY3.42471
46PPK|1|ARbgA+45SRbgA complexELECTRON MICROSCOPY4.42658
55NJT|1|UStructure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization.ELECTRON MICROSCOPY3.82923
63J9W|1|BACryo-EM structure of the Bacillus subtilis MifM-stalled ribosome complexELECTRON MICROSCOPY3.92923
76HA1|1|ACryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycinELECTRON MICROSCOPY3.12887
86HA8|1|ACryo-EM structure of the ABCF protein VmlR bound to the Bacillus subtilis ribosomeELECTRON MICROSCOPY3.52887
93J3V|1|AAtomic model of the immature 50S subunit from Bacillus subtilis (state I-a)ELECTRON MICROSCOPY13.32884