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Equivalence class NR_all_43338.2 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18IFK|1|C (rep)guide RNAEscherichia coli 'BL21-Gold(DE3)pLysS AGCryo-EM structure of monomeric SPARTA gRNA-ssDNA target complexElectron microscopy2.542024-01-17
28IFM|1|Pguide RNAEscherichia coli 'BL21-Gold(DE3)pLysS AGCryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state 2Electron microscopy2.922024-01-17
38QLP|1|CRNA (5'-R(*AP*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*AP*GP*U)-3')Bacillales bacteriumCryoEM structure of the RNA/DNA bound SPARTA (BabAgo/TIR-APAZ) tetrameric complexElectron microscopy3.142024-01-31
48QLP|1|GRNA (5'-R(*AP*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*AP*GP*U)-3')Bacillales bacteriumCryoEM structure of the RNA/DNA bound SPARTA (BabAgo/TIR-APAZ) tetrameric complexElectron microscopy3.142024-01-31
58QLP|1|KRNA (5'-R(*AP*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*AP*GP*U)-3')Bacillales bacteriumCryoEM structure of the RNA/DNA bound SPARTA (BabAgo/TIR-APAZ) tetrameric complexElectron microscopy3.142024-01-31
68QLP|1|ORNA (5'-R(*AP*UP*GP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*AP*GP*U)-3')Bacillales bacteriumCryoEM structure of the RNA/DNA bound SPARTA (BabAgo/TIR-APAZ) tetrameric complexElectron microscopy3.142024-01-31
78IFM|1|Cguide RNAEscherichia coli 'BL21-Gold(DE3)pLysS AGCryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state 2Electron microscopy2.922024-01-17
88IFM|1|Hguide RNAEscherichia coli 'BL21-Gold(DE3)pLysS AGCryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state 2Electron microscopy2.922024-01-17
98IFM|1|Lguide RNAEscherichia coli 'BL21-Gold(DE3)pLysS AGCryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state 2Electron microscopy2.922024-01-17
108IFL|1|Cguide RNAEscherichia coli 'BL21-Gold(DE3)pLysS AGCryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state 1Electron microscopy3.112024-01-17
118IFL|1|Hguide RNAEscherichia coli 'BL21-Gold(DE3)pLysS AGCryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state 1Electron microscopy3.112024-01-17
128IFL|1|Lguide RNAEscherichia coli 'BL21-Gold(DE3)pLysS AGCryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state 1Electron microscopy3.112024-01-17
138IFL|1|Pguide RNAEscherichia coli 'BL21-Gold(DE3)pLysS AGCryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state 1Electron microscopy3.112024-01-17
148K34|1|CRNA (5'-R(P*AP*AP*AP*CP*GP*GP*CP*UP*CP*UP*AP*AP*UP*CP*UP*AP*UP*UP*AP*GP*U)-3')Escherichia coli 'BL21-Gold(DE3)pLysS AGCryo-EM structure of SPARTA gRNA binary complexElectron microscopy2.812024-01-17

Release history

Release3.3203.3213.3223.3233.324
Date2024-01-312024-02-072024-02-142024-02-212024-02-28

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
18QLP|1|OCryoEM structure of the RNA/DNA bound SPARTA (BabAgo/TIR-APAZ) tetrameric complexELECTRON MICROSCOPY3.1421
28QLP|1|GCryoEM structure of the RNA/DNA bound SPARTA (BabAgo/TIR-APAZ) tetrameric complexELECTRON MICROSCOPY3.1421
38QLP|1|CCryoEM structure of the RNA/DNA bound SPARTA (BabAgo/TIR-APAZ) tetrameric complexELECTRON MICROSCOPY3.1421
48QLP|1|KCryoEM structure of the RNA/DNA bound SPARTA (BabAgo/TIR-APAZ) tetrameric complexELECTRON MICROSCOPY3.1421
58IFL|1|PCryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state 1ELECTRON MICROSCOPY3.1120
68IFM|1|PCryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state 2ELECTRON MICROSCOPY2.9220
78IFL|1|HCryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state 1ELECTRON MICROSCOPY3.1120
88IFM|1|HCryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state 2ELECTRON MICROSCOPY2.9220
98IFL|1|LCryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state 1ELECTRON MICROSCOPY3.1120
108IFM|1|LCryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state 2ELECTRON MICROSCOPY2.9220
118IFM|1|CCryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state 2ELECTRON MICROSCOPY2.9220
128IFL|1|CCryo-EM structure of tetrameric SPARTA gRNA-ssDNA target complex in state 1ELECTRON MICROSCOPY3.1120
138IFK|1|CCryo-EM structure of monomeric SPARTA gRNA-ssDNA target complexELECTRON MICROSCOPY2.5420
148K34|1|CCryo-EM structure of SPARTA gRNA binary complexELECTRON MICROSCOPY2.814
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