#IFECompound(s)RNA source organismTitleMethodResolutionDate
14WRT|1|V+ 4WRT|1|R (rep)Influenza virus polymerase vRNA promoter 5' end, Influenza virus polymerase vRNA promoter 3' endCrystal structure of Influenza B polymerase with bound vRNA promoter (form FluB2)X-RAY DIFFRACTION2.72014-11-19
26QCW|1|V+ 6QCW|1|R+ 6QCW|1|MRNA (5'-R(P*AP*GP*UP*AP*GP*UP*AP*AP*CP*AP*AP*GP*AP*G)-3'), RNA (5'-R(*UP*AP*UP*AP*CP*CP*UP*CP*UP*GP*CP*UP*UP*CP*UP*GP*CP*UP*AP*UP*U)-3'), RNA (5'-D(*(GDM))-R(P*GP*AP*AP*UP*GP*CP*CP*AP*UP*AP*AP*UP*AP*G)-3')Crystal structure of influenza B polymerase initiation state with capped 14-mer RNA primerX-RAY DIFFRACTION2.882019-06-05
36QCX|1|V+ 6QCX|1|R+ 6QCX|1|MRNA (5'-R(P*AP*GP*UP*AP*GP*UP*AP*AP*CP*AP*AP*GP*AP*G)-3'), RNA (5'-R(*UP*AP*UP*AP*CP*CP*UP*CP*UP*GP*CP*UP*UP*CP*UP*GP*CP*UP*AP*UP*U)-3'), RNA (5'-D(*(GDM))-R(P*GP*AP*AP*UP*GP*CP*UP*AP*UP*AP*AP*UP*AP*GP*C)-3')Crystal structure of influenza B polymerase initiation state with capped 15-mer RNA primerX-RAY DIFFRACTION3.082019-06-05
46QCV|1|V+ 6QCV|1|R+ 6QCV|1|MRNA (5'-R(P*AP*GP*UP*AP*GP*UP*AP*AP*CP*AP*AP*GP*AP*G)-3'), RNA (5'-R(*UP*AP*UP*AP*CP*CP*UP*CP*UP*GP*CP*UP*UP*CP*UP*GP*CP*UP*AP*UP*U)-3'), RNA (5'-D(*(GDM))-R(P*GP*AP*AP*UP*GP*CP*UP*AP*UP*AP*AP*UP*AP*G)-3')Crystal structure of influenza B polymerase initiation state with capped 14-mer RNA primer and CTPX-RAY DIFFRACTION3.242019-06-05
54WSA|1|V+ 4WSA|1|RInfluenza B vRNA promoter 5' end, Influenza B vRNA promoter 3' endCrystal structure of Influenza B polymerase bound to the vRNA promoter (FluB1 form)X-RAY DIFFRACTION3.42014-11-19
65M3J|1|V+ 5M3J|1|RRNA (5'-R(P*AP*GP*UP*AP*GP*UP*AP*AP*CP*AP*AP*GP*AP*G)-3'), RNA (5'-R(*UP*AP*UP*AP*CP*CP*UP*CP*UP*GP*CP*UP*UP*C)-3')Influenza B polymerase bound to four heptad repeats of serine 5 phosphorylated Pol II CTDX-RAY DIFFRACTION3.52016-12-21
75MSG|1|V+ 5MSG|1|RRNA (5'-R(P*AP*GP*UP*AP*GP*UP*AP*AP*CP*AP*AP*GP*AP*G)-3'), RNA (5'-R(*UP*AP*UP*AP*CP*CP*UP*CP*UP*GP*CP*UP*UP*CP*UP*GP*CP*U)-3')Influenza B polymerase bound to vRNA promoter and capped RNA primerX-RAY DIFFRACTION3.82017-02-08
86QCS|1|V+ 6QCS|1|R5 end, 3 endInfluenza B polymerase pre-initiation complexELECTRON MICROSCOPY3.12019-06-05
96QCT|1|V5 endInfluenza B virusInfluenza B polymerase elongation complexELECTRON MICROSCOPY3.22019-06-05
106F5O|1|V+ 6F5O|1|R5' promoter vRNA, 3' promoter vRNAA mechanism for the activation of the influenza virus transcriptaseELECTRON MICROSCOPY9.82018-06-27

Release history

Release3.773.78
Date2019-06-072019-06-14

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16QCV|1|V+6QCV|1|R+6QCV|1|MCrystal structure of influenza B polymerase initiation state with capped 14-mer RNA primer and CTPX-RAY DIFFRACTION3.2414
26QCX|1|V+6QCX|1|R+6QCX|1|MCrystal structure of influenza B polymerase initiation state with capped 15-mer RNA primerX-RAY DIFFRACTION3.0814
36QCW|1|V+6QCW|1|R+6QCW|1|MCrystal structure of influenza B polymerase initiation state with capped 14-mer RNA primerX-RAY DIFFRACTION2.8814
45MSG|1|V+5MSG|1|RInfluenza B polymerase bound to vRNA promoter and capped RNA primerX-RAY DIFFRACTION3.814
55M3J|1|V+5M3J|1|RInfluenza B polymerase bound to four heptad repeats of serine 5 phosphorylated Pol II CTDX-RAY DIFFRACTION3.514
64WSA|1|V+4WSA|1|RCrystal structure of Influenza B polymerase bound to the vRNA promoter (FluB1 form)X-RAY DIFFRACTION3.414
76QCS|1|V+6QCS|1|RInfluenza B polymerase pre-initiation complexELECTRON MICROSCOPY3.114
84WRT|1|V+4WRT|1|RCrystal structure of Influenza B polymerase with bound vRNA promoter (form FluB2)X-RAY DIFFRACTION2.714
96F5O|1|V+6F5O|1|RA mechanism for the activation of the influenza virus transcriptaseELECTRON MICROSCOPY9.814
106QCT|1|VInfluenza B polymerase elongation complexELECTRON MICROSCOPY3.213