#PDBTitleRNA source organismCompoundsMethodResolutionDate
13J0Q|2 (rep)Core of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 2Oryctolagus cuniculus60S ribosomal RNA fragment, 60S ribosomal RNA fragment, 60S ribosomal RNA fragment, 60S ribosomal RNA fragment, Ribosomal protein L10a, 40S ribosomal RNA fragment, Ribosomal protein L10, Ribosomal protein S23, Ribosomal protein S15, tRNA, Ribosomal protein S30, tRNA, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, Ribosomal protein L11, mRNA fragment, mRNA fragmentELECTRON MICROSCOPY10.62011-11-16
23J0L|2Core of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9.8A cryo-EM map: classic PRE state 1Oryctolagus cuniculus60S ribosomal RNA fragment, 60S ribosomal RNA fragment, 60S ribosomal RNA fragment, 60S ribosomal RNA fragment, 60S ribosomal RNA fragment, 60S ribosomal RNA fragment, 60S ribosomal RNA fragment, 60S ribosomal RNA fragment, Ribosomal protein L10a, 40S ribosomal RNA fragment, Ribosomal protein L36a, 40S ribosomal RNA fragment, Ribosomal protein L10, Ribosomal protein S14, Ribosomal protein S23, Ribosomal protein S15, Ribosomal protein S5, tRNA, tRNA, Ribosomal protein S30, tRNA, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, mRNA fragment, mRNA fragment, mRNA fragmentELECTRON MICROSCOPY9.82011-11-16
33J0O|2Core of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9A cryo-EM map: classic PRE state 2Oryctolagus cuniculus60S ribosomal RNA fragment, 60S ribosomal RNA fragment, 60S ribosomal RNA fragment, 60S ribosomal RNA fragment, 60S ribosomal RNA fragment, 60S ribosomal RNA fragment, 60S ribosomal RNA fragment, Ribosomal protein L10a, 40S ribosomal RNA fragment, Ribosomal protein L36a, 40S ribosomal RNA fragment, Ribosomal protein S14, Ribosomal protein S23, Ribosomal protein S15, Ribosomal protein S5, tRNA, tRNA, Ribosomal protein S30, tRNA, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, mRNA fragment, mRNA fragment, mRNA fragmentELECTRON MICROSCOPY92011-11-16
43J0P|2Core of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 1Oryctolagus cuniculus60S ribosomal RNA fragment, 60S ribosomal RNA fragment, 60S ribosomal RNA fragment, Ribosomal protein L10a, 40S ribosomal RNA fragment, Ribosomal protein S23, Ribosomal protein S15, tRNA, Ribosomal protein S30, tRNA, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, 40S ribosomal RNA fragment, mRNA fragment, mRNA fragmentELECTRON MICROSCOPY10.62011-11-16

Release history

Release0.440.450.460.470.480.490.500.510.520.530.540.550.560.570.580.590.600.610.620.630.640.650.660.670.680.690.700.710.720.730.740.750.760.770.780.790.800.810.820.830.840.850.860.870.880.890.900.910.920.930.940.950.960.970.980.990.1000.1010.1020.1030.1040.1050.1060.1070.1080.1090.1101.01.11.21.31.41.51.61.71.81.91.101.111.121.131.141.151.161.171.181.191.201.211.221.231.241.251.261.271.281.291.301.311.321.331.341.351.361.371.381.391.401.411.421.431.441.451.461.471.481.491.501.511.521.531.541.551.561.571.581.591.601.611.621.631.641.651.661.671.681.691.701.711.721.731.741.751.761.771.781.791.801.811.821.831.841.851.861.871.881.89
Date2011-11-192011-11-262011-12-032011-12-102011-12-172011-12-242011-12-312012-01-072012-01-142012-01-212012-01-282012-02-042012-02-112012-02-182012-02-252012-03-032012-03-102012-03-172012-03-242012-03-312012-04-072012-04-142012-04-212012-04-282012-05-052012-05-122012-05-192012-05-262012-06-022012-06-092012-06-162012-06-232012-06-302012-07-072012-07-142012-07-212012-07-282012-08-042012-08-112012-08-182012-08-252012-09-012012-09-082012-09-152012-09-222012-09-292012-10-062012-10-132012-10-202012-10-272012-11-032012-11-102012-11-172012-11-242012-12-012012-12-082012-12-152012-12-222012-12-292013-01-052013-01-122013-01-192013-01-262013-02-022013-02-092013-02-162013-02-232013-03-022013-03-092013-03-162013-03-232013-03-302013-04-062013-04-132013-04-202013-04-272013-05-042013-05-112013-05-182013-05-252013-06-012013-06-082013-06-152013-06-222013-06-292013-07-062013-07-132013-07-202013-07-272013-08-032013-08-102013-08-172013-08-242013-08-312013-09-072013-09-142013-09-212013-09-282013-10-052013-10-122013-10-192013-10-262013-11-092013-11-162013-11-232013-11-302013-12-072013-12-142013-12-212013-12-282014-01-042014-01-112014-01-182014-01-252014-02-012014-02-082014-02-152014-02-222014-03-012014-03-082014-03-172014-03-222014-03-292014-04-052014-04-122014-04-192014-04-262014-05-032014-05-102014-05-172014-05-312014-06-072014-06-132014-06-202014-06-272014-07-042014-07-182014-07-252014-08-012014-08-082014-08-152014-08-222014-08-292014-09-052014-09-122014-09-192014-09-262014-10-032014-10-102014-10-172014-10-242014-10-312014-11-072014-11-142014-11-212014-11-282014-12-05

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This classDescendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength