#IFECompound(s)RNA source organismTitleMethodResolutionDate
15VYC|1|i2 (rep)Human 18S ribosomal RNAHomo sapiensCrystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION62017-07-19
25VYC|1|i3Human 18S ribosomal RNAHomo sapiensCrystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION62017-07-19
35VYC|1|i5Human 18S ribosomal RNAHomo sapiensCrystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION62017-07-19
45VYC|1|i1Human 18S ribosomal RNAHomo sapiensCrystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION62017-07-19
55VYC|1|i6Human 18S ribosomal RNAHomo sapiensCrystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION62017-07-19
65VYC|1|i4Human 18S ribosomal RNAHomo sapiensCrystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION62017-07-19
76ZMI|1|S218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexELECTRON MICROSCOPY2.62020-08-19
86ZM7|1|S218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexELECTRON MICROSCOPY2.72020-07-29
96ZLW|1|218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to the human 40S ribosomal subunitELECTRON MICROSCOPY2.62020-07-29
106ZVH|1|218S rRNAHomo sapiensEDF1-ribosome complexELECTRON MICROSCOPY2.92020-08-19
116Z6N|1|S218S rRNAHomo sapiensCryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)ELECTRON MICROSCOPY2.92020-07-29
126ZOJ|1|218S ribosomal RNAHomo sapiensSARS-CoV-2-Nsp1-40S complex, composite mapELECTRON MICROSCOPY2.82020-07-22
136ZP4|1|218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 2ELECTRON MICROSCOPY2.92020-07-29
146ZXG|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State H1ELECTRON MICROSCOPY2.62020-12-02
156QZP|1|S218S rRNA (1740-MER)Homo sapiensHigh-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.92019-04-24
166ZME|1|S218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexELECTRON MICROSCOPY32020-08-12
176Z6L|1|S218S rRNAHomo sapiensCryo-EM structure of human CCDC124 bound to 80S ribosomesELECTRON MICROSCOPY32020-07-29
186ZV6|1|218S ribosomal RNAHomo sapiensHuman RIO1(kd)-StHA late pre-40S particle, structural state B (post 18S rRNA cleavage)ELECTRON MICROSCOPY2.92021-05-12
196ZON|1|218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 1ELECTRON MICROSCOPY32020-07-29
206ZXH|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State H2ELECTRON MICROSCOPY2.72020-12-16
217K5I|1|240S ribosomal rRNA18SHomo sapiensSARS-COV-2 nsp1 in complex with human 40S ribosomeELECTRON MICROSCOPY2.92020-10-14
226ZMO|1|S218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complexELECTRON MICROSCOPY3.12020-08-19
236Z6M|1|S218S rRNAHomo sapiensCryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1ELECTRON MICROSCOPY3.12020-07-29
247MQA|1|L118S rRNAHomo sapiensCryo-EM structure of the human SSU processome, state post-A1ELECTRON MICROSCOPY2.72021-09-22
256ZXE|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State F2ELECTRON MICROSCOPY32020-12-02
266Y2L|1|S218S ribosomal RNAHomo sapiensStructure of human ribosome in POST stateELECTRON MICROSCOPY32020-04-15
276ZUO|1|2pre-18S ribosomal RNAHomo sapiensHuman RIO1(kd)-StHA late pre-40S particle, structural state A (pre 18S rRNA cleavage)ELECTRON MICROSCOPY3.12021-05-12
286XA1|1|S218S rRNAHomo sapiensStructure of a drug-like compound stalled human translation termination complexELECTRON MICROSCOPY2.82020-10-07
296OM0|1|S218S ribosomal RNAHomo sapiensHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.12019-06-19
306OLE|1|S218S ribosomal RNAHomo sapiensHuman ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.12019-06-19
316ZN5|1|218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complex - state 2ELECTRON MICROSCOPY3.22020-07-29
326ZXD|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State F1ELECTRON MICROSCOPY3.22020-12-02
336Y0G|1|S218S ribosomal RNAHomo sapiensStructure of human ribosome in classical-PRE stateELECTRON MICROSCOPY3.22020-04-15
346ZMT|1|218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complexELECTRON MICROSCOPY32020-08-19
357A09|1|218S ribosomal RNAHomo sapiensStructure of a human ABCE1-bound 43S pre-initiation complex - State IIIELECTRON MICROSCOPY3.52020-10-14
366OLG|1|B118S ribosomal RNAHomo sapiensHuman ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)ELECTRON MICROSCOPY3.42019-06-19
377TQL|1|218S ribosomal RNAHomo sapiensCryoEM structure of the human 40S small ribosomal subunit in complex with translation initiation factors eIF1A and eIF5B.ELECTRON MICROSCOPY3.42022-04-27
386OLI|1|S218S ribosomal RNAHomo sapiensStructure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)ELECTRON MICROSCOPY3.52019-06-19
397QP7|1|A18S rRNAHomo sapiensStructure of the human 48S initiation complex in closed state (h48S AUG closed)ELECTRON MICROSCOPY3.72022-05-11
406ZMW|1|A18S rRNAHomo sapiensStructure of a human 48S translational initiation complexELECTRON MICROSCOPY3.72020-09-23
416Y57|1|S218S ribosomal RNAHomo sapiensStructure of human ribosome in hybrid-PRE stateELECTRON MICROSCOPY3.52020-04-15
426ZVJ|1|218S ribosomal RNAHomo sapiensStructure of a human ABCE1-bound 43S pre-initiation complex - State IIELECTRON MICROSCOPY3.82020-10-07
436G18|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State CELECTRON MICROSCOPY3.62018-06-06
446G5I|1|218S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State RELECTRON MICROSCOPY3.52018-06-06
454UG0|1|S218S ribosomal RNAHomo sapiensSTRUCTURE OF THE HUMAN 80S RIBOSOMEELECTRON MICROSCOPY3.62015-06-10
466ZXF|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State GELECTRON MICROSCOPY3.72020-12-02
476IP8|1|2m18S ribosomal RNAHomo sapiensCryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)ELECTRON MICROSCOPY3.92019-05-29
486IP5|1|2m18S ribosomal RNAHomo sapiensCryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)ELECTRON MICROSCOPY3.92019-05-29
496G5H|1|218S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - MatureELECTRON MICROSCOPY3.62018-06-06
506ZOK|1|218S ribosomal RNAHomo sapiensSARS-CoV-2-Nsp1-40S complex, focused on bodyELECTRON MICROSCOPY2.82020-07-29
516OM7|1|S218S ribosomal RNAHomo sapiensHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAsELECTRON MICROSCOPY3.72019-06-19
526OLZ|1|B118S ribosomal RNAHomo sapiensHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNAELECTRON MICROSCOPY3.92019-06-19
535AJ0|1|B118S ribosomal RNAHomo sapiensCryo electron microscopy of actively translating human polysomes (POST state).ELECTRON MICROSCOPY3.52015-05-20
546OLF|1|S218S ribosomal RNAHomo sapiensHuman ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAsELECTRON MICROSCOPY3.92019-06-19
555A2Q|1|218S RRNAHomo sapiensStructure of the HCV IRES bound to the human ribosomeELECTRON MICROSCOPY3.92015-07-15
566YBW|1|A18S rRNAHomo sapiensStructure of a human 48S translational initiation complex - 40S bodyELECTRON MICROSCOPY3.12020-09-16
576G51|1|218S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State DELECTRON MICROSCOPY4.12018-06-06
586G4S|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State BELECTRON MICROSCOPY42018-06-06
596IP6|1|2m18S ribosomal RNAHomo sapiensCryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii)ELECTRON MICROSCOPY4.52019-05-29
605OA3|1|218S ribosomal RNAHomo sapiensHuman 40S-eIF2D-re-initiation complexELECTRON MICROSCOPY4.22017-08-09
615LKS|1|S218S ribosomal RNAHomo sapiensStructure-function insights reveal the human ribosome as a cancer target for antibioticsELECTRON MICROSCOPY3.62017-04-26
627MQ8|1|L118S rRNAHomo sapiensCryo-EM structure of the human SSU processome, state pre-A1ELECTRON MICROSCOPY3.62021-09-22
636G53|1|218S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State EELECTRON MICROSCOPY4.52018-06-06
647QP6|1|A18S rRNAHomo sapiensStructure of the human 48S initiation complex in open state (h48S AUG open)ELECTRON MICROSCOPY4.72022-05-11
657MQ9|1|L118S rRNAHomo sapiensCryo-EM structure of the human SSU processome, state pre-A1*ELECTRON MICROSCOPY3.872021-09-22
666G4W|1|218S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State AELECTRON MICROSCOPY4.52018-06-06
674V6X|1|B218S ribosomal RNAHomo sapiensStructure of the human 80S ribosomeELECTRON MICROSCOPY52014-07-09
686ZOL|1|218S ribosomal RNAHomo sapiensSARS-CoV-2-Nsp1-40S complex, focused on headELECTRON MICROSCOPY2.82020-07-22
695T2C|1|AA18S rRNAHomo sapiensCryoEM structure of the human ribosome at 3.6 Angstrom resolutionELECTRON MICROSCOPY3.62017-01-25
706FEC|1|A18S ribosomal RNAHomo sapiensHuman cap-dependent 48S pre-initiation complexELECTRON MICROSCOPY6.32018-03-14
715A8L|1|BHUMAN 18S RIBOSOMAL RNAHomo sapiensHuman eRF1 and the hCMV nascent peptide in the translation termination complexELECTRON MICROSCOPY3.82015-12-02

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16G4W|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State AELECTRON MICROSCOPY4.51563
27MQ8|1|L1Cryo-EM structure of the human SSU processome, state pre-A1ELECTRON MICROSCOPY3.61301
37MQ9|1|L1Cryo-EM structure of the human SSU processome, state pre-A1*ELECTRON MICROSCOPY3.871301
47MQA|1|L1Cryo-EM structure of the human SSU processome, state post-A1ELECTRON MICROSCOPY2.71570
56YBW|1|AStructure of a human 48S translational initiation complex - 40S bodyELECTRON MICROSCOPY3.11196
66ZMW|1|AStructure of a human 48S translational initiation complexELECTRON MICROSCOPY3.71691
76Z6M|1|S2Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1ELECTRON MICROSCOPY3.11740
85A2Q|1|2Structure of the HCV IRES bound to the human ribosomeELECTRON MICROSCOPY3.91665
96ZON|1|2SARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 1ELECTRON MICROSCOPY31721
106ZVJ|1|2Structure of a human ABCE1-bound 43S pre-initiation complex - State IIELECTRON MICROSCOPY3.81720
114V6X|1|B2Structure of the human 80S ribosomeELECTRON MICROSCOPY51861
125VYC|1|i6Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION61742
135VYC|1|i1Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION61742
145VYC|1|i2Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION61742
155VYC|1|i5Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION61742
165VYC|1|i3Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION61742
175VYC|1|i4Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.X-RAY DIFFRACTION61742
185T2C|1|AACryoEM structure of the human ribosome at 3.6 Angstrom resolutionELECTRON MICROSCOPY3.61742
194UG0|1|S2STRUCTURE OF THE HUMAN 80S RIBOSOMEELECTRON MICROSCOPY3.61742
205LKS|1|S2Structure-function insights reveal the human ribosome as a cancer target for antibioticsELECTRON MICROSCOPY3.61742
216IP8|1|2mCryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)ELECTRON MICROSCOPY3.91742
226IP6|1|2mCryo-EM structure of the CMV-stalled human 80S ribosome with HCV IRES (Structure iii)ELECTRON MICROSCOPY4.51742
236IP5|1|2mCryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)ELECTRON MICROSCOPY3.91742
246OLZ|1|B1Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNAELECTRON MICROSCOPY3.91708
256OLG|1|B1Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)ELECTRON MICROSCOPY3.41708
265AJ0|1|B1Cryo electron microscopy of actively translating human polysomes (POST state).ELECTRON MICROSCOPY3.51708
276Y0G|1|S2Structure of human ribosome in classical-PRE stateELECTRON MICROSCOPY3.21697
286Y57|1|S2Structure of human ribosome in hybrid-PRE stateELECTRON MICROSCOPY3.51658
296OLI|1|S2Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)ELECTRON MICROSCOPY3.51680
306OLE|1|S2Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.11680
316OLF|1|S2Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAsELECTRON MICROSCOPY3.91680
327QP7|1|AStructure of the human 48S initiation complex in closed state (h48S AUG closed)ELECTRON MICROSCOPY3.71693
336Y2L|1|S2Structure of human ribosome in POST stateELECTRON MICROSCOPY31713
346XA1|1|S2Structure of a drug-like compound stalled human translation termination complexELECTRON MICROSCOPY2.81512
356QZP|1|S2High-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.91707
366Z6N|1|S2Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)ELECTRON MICROSCOPY2.91740
376Z6L|1|S2Cryo-EM structure of human CCDC124 bound to 80S ribosomesELECTRON MICROSCOPY31740
386ZMO|1|S2SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complexELECTRON MICROSCOPY3.11740
396ZMI|1|S2SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexELECTRON MICROSCOPY2.61740
406ZM7|1|S2SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexELECTRON MICROSCOPY2.71740
416ZME|1|S2SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexELECTRON MICROSCOPY31740
426ZVH|1|2EDF1-ribosome complexELECTRON MICROSCOPY2.91740
437TQL|1|2CryoEM structure of the human 40S small ribosomal subunit in complex with translation initiation factors eIF1A and eIF5B.ELECTRON MICROSCOPY3.41656
446ZN5|1|2SARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complex - state 2ELECTRON MICROSCOPY3.21671
456FEC|1|AHuman cap-dependent 48S pre-initiation complexELECTRON MICROSCOPY6.31776
466ZV6|1|2Human RIO1(kd)-StHA late pre-40S particle, structural state B (post 18S rRNA cleavage)ELECTRON MICROSCOPY2.91681
476G5H|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - MatureELECTRON MICROSCOPY3.61665
485OA3|1|2Human 40S-eIF2D-re-initiation complexELECTRON MICROSCOPY4.21661
496ZOJ|1|2SARS-CoV-2-Nsp1-40S complex, composite mapELECTRON MICROSCOPY2.81704
506ZOK|1|2SARS-CoV-2-Nsp1-40S complex, focused on bodyELECTRON MICROSCOPY2.81232
516ZXH|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State H2ELECTRON MICROSCOPY2.71577
526ZXG|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State H1ELECTRON MICROSCOPY2.61577
536ZXF|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State GELECTRON MICROSCOPY3.71656
546ZXE|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State F2ELECTRON MICROSCOPY31645
556G5I|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State RELECTRON MICROSCOPY3.51657
566ZUO|1|2Human RIO1(kd)-StHA late pre-40S particle, structural state A (pre 18S rRNA cleavage)ELECTRON MICROSCOPY3.11665
576G18|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State CELECTRON MICROSCOPY3.61658
586ZXD|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State F1ELECTRON MICROSCOPY3.21645
596ZMT|1|2SARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complexELECTRON MICROSCOPY31569
607QP6|1|AStructure of the human 48S initiation complex in open state (h48S AUG open)ELECTRON MICROSCOPY4.71693
617A09|1|2Structure of a human ABCE1-bound 43S pre-initiation complex - State IIIELECTRON MICROSCOPY3.51721
626ZP4|1|2SARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 2ELECTRON MICROSCOPY2.91721
636ZOL|1|2SARS-CoV-2-Nsp1-40S complex, focused on headELECTRON MICROSCOPY2.8472
647K5I|1|2SARS-COV-2 nsp1 in complex with human 40S ribosomeELECTRON MICROSCOPY2.91665
656ZLW|1|2SARS-CoV-2 Nsp1 bound to the human 40S ribosomal subunitELECTRON MICROSCOPY2.61665
666OM7|1|S2Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAsELECTRON MICROSCOPY3.71680
676OM0|1|S2Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.11680
685A8L|1|BHuman eRF1 and the hCMV nascent peptide in the translation termination complexELECTRON MICROSCOPY3.867
696G4S|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State BELECTRON MICROSCOPY41613
706G51|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State DELECTRON MICROSCOPY4.11659
716G53|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State EELECTRON MICROSCOPY4.51659