#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
18D28|1|B (rep)RNA (33-MER)synthetic constructCrystal structure of theophylline aptamer in complex with theophyllineX-ray diffraction1.42332022-11-30
28D28|1|ARNA (33-MER)synthetic constructCrystal structure of theophylline aptamer in complex with theophyllineX-ray diffraction1.42332022-11-30
38D5L|1|DRNA (33-MER)synthetic constructCrystal structure of theophylline aptamer in complex with TAL1X-ray diffraction1.64332022-11-30
48D5L|1|CRNA (33-MER)synthetic constructCrystal structure of theophylline aptamer in complex with TAL1X-ray diffraction1.64332022-11-30
58D5L|1|BRNA (33-MER)synthetic constructCrystal structure of theophylline aptamer in complex with TAL1X-ray diffraction1.64332022-11-30
68D5L|1|ARNA (33-MER)synthetic constructCrystal structure of theophylline aptamer in complex with TAL1X-ray diffraction1.64332022-11-30
78D2B|1|ARNA (33-MER)synthetic constructCrystal structure of theophylline aptamer in complex with TAL2X-ray diffraction1.44332022-11-30
88D2B|1|BRNA (33-MER)synthetic constructCrystal structure of theophylline aptamer in complex with TAL2X-ray diffraction1.44332022-11-30
98D2A|1|BRNA (33-MER)synthetic constructCrystal structure of theophylline aptamer in complex with TAL3X-ray diffraction2.17332022-11-30
108D2A|1|ARNA (33-MER)synthetic constructCrystal structure of theophylline aptamer in complex with TAL3X-ray diffraction2.17332022-11-30
118D5O|1|ARNA (33-MER)synthetic constructCrystal structure of theophylline aptamer in complex with TAL4X-ray diffraction2.7332022-11-30
128D5O|1|BRNA (33-MER)synthetic constructCrystal structure of theophylline aptamer in complex with TAL4X-ray diffraction2.7332022-11-30
131EHT|3|ATHEOPHYLLINE-BINDING RNATHEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, 10 STRUCTURESSolution NMR331997-12-24
141O15|1|ATHEOPHYLLINE-BINDING RNATHEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, REGULARIZED MEAN STRUCTURE, REFINEMENT WITH TORSION ANGLE AND BASE-BASE POSITIONAL DATABASE POTENTIALS AND DIPOLAR COUPLINGSSolution NMR332003-02-18

Release history

Release3.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.3323.3333.3343.3353.3363.3373.338
Date2022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-012024-05-082024-05-152024-05-222024-05-292024-06-05

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_48165.1NR_all_97287.13.259(2) 1EHT|3|A, 1O15|1|A(12) 8D28|1|A, 8D28|1|B, 8D2A|1|A, 8D2A|1|B, 8D2B|1|A, 8D2B|1|B, 8D5L|1|A, 8D5L|1|B, 8D5L|1|C, 8D5L|1|D, 8D5O|1|A, 8D5O|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
18D5L|1|DCrystal structure of theophylline aptamer in complex with TAL1X-RAY DIFFRACTION1.6433
28D5L|1|BCrystal structure of theophylline aptamer in complex with TAL1X-RAY DIFFRACTION1.6433
38D5L|1|CCrystal structure of theophylline aptamer in complex with TAL1X-RAY DIFFRACTION1.6433
48D5L|1|ACrystal structure of theophylline aptamer in complex with TAL1X-RAY DIFFRACTION1.6433
58D28|1|ACrystal structure of theophylline aptamer in complex with theophyllineX-RAY DIFFRACTION1.4233
68D2A|1|BCrystal structure of theophylline aptamer in complex with TAL3X-RAY DIFFRACTION2.1733
78D5O|1|ACrystal structure of theophylline aptamer in complex with TAL4X-RAY DIFFRACTION2.733
88D2B|1|ACrystal structure of theophylline aptamer in complex with TAL2X-RAY DIFFRACTION1.4433
98D5O|1|BCrystal structure of theophylline aptamer in complex with TAL4X-RAY DIFFRACTION2.733
108D2A|1|ACrystal structure of theophylline aptamer in complex with TAL3X-RAY DIFFRACTION2.1733
118D2B|1|BCrystal structure of theophylline aptamer in complex with TAL2X-RAY DIFFRACTION1.4433
128D28|1|BCrystal structure of theophylline aptamer in complex with theophyllineX-RAY DIFFRACTION1.4233
131O15|1|ATHEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, REGULARIZED MEAN STRUCTURE, REFINEMENT WITH TORSION ANGLE AND BASE-BASE POSITIONAL DATABASE POTENTIALS AND DIPOLAR COUPLINGSSOLUTION NMR33
141EHT|3|ATHEOPHYLLINE-BINDING RNA IN COMPLEX WITH THEOPHYLLINE, NMR, 10 STRUCTURESSOLUTION NMR33

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0112 s