Equivalence class NR_all_49339.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5DHC|1|C+ 5DHC|1|D (rep) | RNA (5'-R(*(LCC)P*(LCC)P*(LCA)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*U)-3') | synthetic construct | Synthetic | Cooperativity and Downstream Binding in RNA Replication | X-ray diffraction | 1.55 | 2016-12-07 | ||
| 2 | 5HBX|1|A+ 5HBX|1|B | RNA (5'-R(*(LCC)P*(LCC)P*(LCA)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*U)-3') | synthetic construct | Synthetic | RNA primer-template complex with 2-methylimidazole-activated monomer analogue-2 binding sites | X-ray diffraction | 1.7 | 2016-12-07 | ||
| 3 | 5DHC|1|A+ 5DHC|1|B | RNA (5'-R(*(LCC)P*(LCC)P*(LCA)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*U)-3') | synthetic construct | Synthetic | Cooperativity and Downstream Binding in RNA Replication | X-ray diffraction | 1.55 | 2016-12-07 | ||
| 4 | 5HBX|1|C+ 5HBX|1|D | RNA (5'-R(*(LCC)P*(LCC)P*(LCA)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*U)-3') | synthetic construct | Synthetic | RNA primer-template complex with 2-methylimidazole-activated monomer analogue-2 binding sites | X-ray diffraction | 1.7 | 2016-12-07 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_49339.1 | NR_all_49339.2 | 2.118 | (4) 5HBX|1|C+5HBX|1|D, 5HBX|1|A+5HBX|1|B, 5DHC|1|C+5DHC|1|D, 5DHC|1|A+5DHC|1|B | (0) | (1) 5V0J|1|A+5V0J|1|B |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5DHC|1|C+5DHC|1|D | Cooperativity and Downstream Binding in RNA Replication | X-RAY DIFFRACTION | 1.55 | 10 |
| 2 | 5DHC|1|A+5DHC|1|B | Cooperativity and Downstream Binding in RNA Replication | X-RAY DIFFRACTION | 1.55 | 10 |
| 3 | 5HBX|1|A+5HBX|1|B | RNA primer-template complex with 2-methylimidazole-activated monomer analogue-2 binding sites | X-RAY DIFFRACTION | 1.7 | 10 |
| 4 | 5HBX|1|C+5HBX|1|D | RNA primer-template complex with 2-methylimidazole-activated monomer analogue-2 binding sites | X-RAY DIFFRACTION | 1.7 | 10 |