Equivalence class NR_all_51660.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5GAD|1|1 (rep) | Small signal recognition particle RNA | ESRP 4.5S RNA | Escherichia coli | Bacteria | RF00169 | RNC-SRP-SR complex early state | Electron microscopy | 3.7 | 2016-01-27 |
| 2 | 5GAH|1|1 | Small signal recognition particle RNA | SRP 4.5S RNA | Escherichia coli | Bacteria | RF00169 | RNC in complex with SRP with detached NG domain | Electron microscopy | 3.8 | 2016-01-27 |
| 3 | 5GAG|1|1 | Small signal recognition particle RNA | SRP 4.5S RNA | Escherichia coli | Bacteria | RF00169 | RNC in complex with SRP-SR in the closed state | Electron microscopy | 3.8 | 2016-01-27 |
| 4 | 2IY3|1|B | Small signal recognition particle RNA | 4.5S RNA | Escherichia coli | Bacteria | RF00169 | Structure of the E. Coli Signal Regognition Particle | Electron microscopy | 16 | 2006-11-02 |
Release history
| Release | 2.60 |
|---|---|
| Date | 2016-01-29 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_51660.1 | NR_20.0_51660.2 | 2.61 | (4) 5GAD|1|1, 2IY3|1|B, 5GAH|1|1, 5GAG|1|1 | (0) | (1) 5GAF|1|1 |
| NR_all_51660.1 | NR_4.0_51660.2 | 2.61 | (3) 5GAG|1|1, 5GAD|1|1, 5GAH|1|1 | (1) 2IY3|1|B | (0) |
| NR_all_51660.1 | NR_all_51660.2 | 2.61 | (4) 5GAG|1|1, 5GAD|1|1, 2IY3|1|B, 5GAH|1|1 | (0) | (1) 5GAF|1|1 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5GAD|1|1 | RNC-SRP-SR complex early state | ELECTRON MICROSCOPY | 3.7 | 43 |
| 2 | 5GAH|1|1 | RNC in complex with SRP with detached NG domain | ELECTRON MICROSCOPY | 3.8 | 43 |
| 3 | 5GAG|1|1 | RNC in complex with SRP-SR in the closed state | ELECTRON MICROSCOPY | 3.8 | 43 |
| 4 | 2IY3|1|B | Structure of the E. Coli Signal Regognition Particle | ELECTRON MICROSCOPY | 16 | 110 |