#IFECompound(s)RNA source organismTitleMethodResolutionDate
11Z7F|1|A (rep)5'-R(*GP*CP*AP*GP*AP*CP*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3'Crystal structure of 16 base pair RNA duplex containing a C-A mismatchX-RAY DIFFRACTION2.12005-10-18
2405D|1|A+ 405D|1|BRNA (5'-R(*GP*CP*AP*GP*AP*CP*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3')STRUCTURE OF A 16-MER RNA DUPLEX R(GCAGACUUAAAUCUGC)2 WITH WOBBLE LIKE A.C MISMATCHESX-RAY DIFFRACTION2.51999-01-13
31Z79|1|A+ 1Z79|1|BRNA 5'-R(*GP*CP*AP*GP*AP*(A5M)P*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3'Crystal structure of an RNA duplex containing site specific 2'-amine substitution at a C-A mismatch (at pH 5)X-RAY DIFFRACTION2.552005-10-18
41YY0|1|A+ 1YY0|1|B5'-R(*GP*CP*AP*GP*AP*(A5M)P*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3', 5'-R(*GP*CP*AP*GP*AP*(M5M)P*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3'Crystal structure of an RNA duplex containing a 2'-amine substitution and a 2'-amide product produced by in-crystal acylation at a C-A mismatchX-RAY DIFFRACTION3.22005-10-18
51YRM|1|A+ 1YRM|1|BDNA/RNA (5'-R(*GP*CP*AP*GP*A)-D(P*(A5M))-R(P*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3')Crystal Structure of an RNA duplex containing site specific 2'-amine substitutions at a C-A mismatchX-RAY DIFFRACTION2.52005-10-18
61YY0|1|C5'-R(*GP*CP*AP*GP*AP*(A5M)P*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3'Crystal structure of an RNA duplex containing a 2'-amine substitution and a 2'-amide product produced by in-crystal acylation at a C-A mismatchX-RAY DIFFRACTION3.22005-10-18
71YRM|1|CDNA/RNA (5'-R(*GP*CP*AP*GP*A)-D(P*(A5M))-R(P*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3')Crystal Structure of an RNA duplex containing site specific 2'-amine substitutions at a C-A mismatchX-RAY DIFFRACTION2.52005-10-18
81Z79|1|CRNA 5'-R(*GP*CP*AP*GP*AP*(A5M)P*UP*UP*AP*AP*AP*UP*CP*UP*GP*C)-3'Crystal structure of an RNA duplex containing site specific 2'-amine substitution at a C-A mismatch (at pH 5)X-RAY DIFFRACTION2.552005-10-18

Release history

Release2.1532.1542.1552.1562.1572.1583.03.13.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.87
Date2017-11-032017-11-102017-11-172017-11-242017-12-012017-12-082017-12-152017-12-222017-12-292018-01-052018-01-122018-01-192018-01-262018-02-022018-02-092018-02-162018-02-232018-03-012018-03-082018-03-152018-03-222018-03-292018-04-062018-04-132018-04-202018-04-272018-05-042018-05-112018-05-182018-05-252018-06-012018-06-082018-06-152018-06-222018-06-292018-07-062018-07-132018-07-202018-07-272018-08-032018-08-102018-08-172018-08-242018-08-312018-09-072018-09-142018-09-212018-09-282018-10-052018-10-122018-10-192018-10-262018-11-022018-11-092018-11-162018-11-232018-11-302018-12-072018-12-142018-12-212018-12-282019-01-042019-01-112019-01-182019-01-252019-02-012019-02-082019-02-152019-02-222019-03-012019-03-082019-03-152019-03-222019-03-292019-04-052019-04-122019-04-192019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-16

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_51779.4NR_all_51779.32.153(6) 405D|1|A+405D|1|B, 1Z7F|1|A, 1Z79|1|C, 1Z79|1|A+1Z79|1|B, 1YY0|1|C, 1YY0|1|A+1YY0|1|B(2) 1YRM|1|C, 1YRM|1|A+1YRM|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
1405D|1|A+405D|1|BSTRUCTURE OF A 16-MER RNA DUPLEX R(GCAGACUUAAAUCUGC)2 WITH WOBBLE LIKE A.C MISMATCHESX-RAY DIFFRACTION2.516
21YRM|1|CCrystal Structure of an RNA duplex containing site specific 2'-amine substitutions at a C-A mismatchX-RAY DIFFRACTION2.515
31Z79|1|CCrystal structure of an RNA duplex containing site specific 2'-amine substitution at a C-A mismatch (at pH 5)X-RAY DIFFRACTION2.5515
41Z7F|1|ACrystal structure of 16 base pair RNA duplex containing a C-A mismatchX-RAY DIFFRACTION2.116
51YY0|1|CCrystal structure of an RNA duplex containing a 2'-amine substitution and a 2'-amide product produced by in-crystal acylation at a C-A mismatchX-RAY DIFFRACTION3.215
61YY0|1|A+1YY0|1|BCrystal structure of an RNA duplex containing a 2'-amine substitution and a 2'-amide product produced by in-crystal acylation at a C-A mismatchX-RAY DIFFRACTION3.215
71YRM|1|A+1YRM|1|BCrystal Structure of an RNA duplex containing site specific 2'-amine substitutions at a C-A mismatchX-RAY DIFFRACTION2.515
81Z79|1|A+1Z79|1|BCrystal structure of an RNA duplex containing site specific 2'-amine substitution at a C-A mismatch (at pH 5)X-RAY DIFFRACTION2.5515