#PDBTitleRNA source organismCompoundsMethodResolutionDate
12HOJ|A (rep)Crystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, manganese ionsthi-box riboswitchX-RAY DIFFRACTION2.52006-09-19
22HOK|ACrystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, calcium ionsthi-box riboswitchX-RAY DIFFRACTION3.22006-09-19
32HOL|ACrystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, barium ionsthi-box riboswitchX-RAY DIFFRACTION2.92006-09-19
42HOM|ACrystal structure of an E. coli thi-box riboswitch bound to thiamine monophosphatethi-box riboswitchX-RAY DIFFRACTION2.892006-09-19
52HOO|ACrystal structure of an E. coli thi-box riboswitch bound to benfotiaminethi-box riboswitchX-RAY DIFFRACTION32006-09-19
62HOP|ACrystal structure of an E. coli thi-box riboswitch bound to pyrithiaminethi-box riboswitchX-RAY DIFFRACTION3.32006-09-19
73K0J|ECrystal structure of the E. coli ThiM riboswitch in complex with thiamine pyrophosphate and the U1A crystallization moduleU1 small nuclear ribonucleoprotein A, U1 small nuclear ribonucleoprotein A, U1 small nuclear ribonucleoprotein A, U1 small nuclear ribonucleoprotein A, RNA (87-MER), RNA (87-MER)X-RAY DIFFRACTION3.12009-12-22

Release history

Release0.160.170.180.190.200.210.220.230.240.250.260.270.280.290.300.310.320.330.340.350.360.370.380.390.400.410.420.430.440.450.460.470.480.490.500.510.520.530.540.550.560.570.580.590.600.610.620.630.640.650.660.670.680.690.700.710.720.730.740.750.760.770.780.790.800.810.820.830.840.850.860.870.880.890.900.910.920.930.940.950.960.970.980.990.1000.1010.1020.1030.1040.1050.1060.1070.1080.1090.1101.01.11.21.31.41.51.61.71.81.91.101.111.121.131.141.151.161.171.181.191.201.211.221.231.241.251.261.271.281.291.301.311.321.331.341.351.361.371.381.391.401.411.421.431.441.451.461.471.481.491.501.511.521.531.541.551.561.571.581.591.601.611.621.63
Date2011-05-072011-05-142011-05-212011-05-282011-06-042011-06-112011-06-182011-06-252011-07-022011-07-092011-07-162011-07-232011-07-302011-08-062011-08-132011-08-202011-08-272011-09-032011-09-102011-09-172011-09-242011-10-012011-10-082011-10-152011-10-222011-10-292011-11-052011-11-122011-11-192011-11-262011-12-032011-12-102011-12-172011-12-242011-12-312012-01-072012-01-142012-01-212012-01-282012-02-042012-02-112012-02-182012-02-252012-03-032012-03-102012-03-172012-03-242012-03-312012-04-072012-04-142012-04-212012-04-282012-05-052012-05-122012-05-192012-05-262012-06-022012-06-092012-06-162012-06-232012-06-302012-07-072012-07-142012-07-212012-07-282012-08-042012-08-112012-08-182012-08-252012-09-012012-09-082012-09-152012-09-222012-09-292012-10-062012-10-132012-10-202012-10-272012-11-032012-11-102012-11-172012-11-242012-12-012012-12-082012-12-152012-12-222012-12-292013-01-052013-01-122013-01-192013-01-262013-02-022013-02-092013-02-162013-02-232013-03-022013-03-092013-03-162013-03-232013-03-302013-04-062013-04-132013-04-202013-04-272013-05-042013-05-112013-05-182013-05-252013-06-012013-06-082013-06-152013-06-222013-06-292013-07-062013-07-132013-07-202013-07-272013-08-032013-08-102013-08-172013-08-242013-08-312013-09-072013-09-142013-09-212013-09-282013-10-052013-10-122013-10-192013-10-262013-11-092013-11-162013-11-232013-11-302013-12-072013-12-142013-12-212013-12-282014-01-042014-01-112014-01-182014-01-252014-02-012014-02-082014-02-152014-02-222014-03-012014-03-082014-03-172014-03-222014-03-292014-04-052014-04-122014-04-192014-04-262014-05-032014-05-102014-05-172014-05-31

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Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
12HOJ|ACrystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, manganese ionsX-RAY DIFFRACTION2.583
22HOL|ACrystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, barium ionsX-RAY DIFFRACTION2.983
32HOM|ACrystal structure of an E. coli thi-box riboswitch bound to thiamine monophosphateX-RAY DIFFRACTION2.8983
42HOK|ACrystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, calcium ionsX-RAY DIFFRACTION3.283
52HOO|ACrystal structure of an E. coli thi-box riboswitch bound to benfotiamineX-RAY DIFFRACTION383
63K0J|ECrystal structure of the E. coli ThiM riboswitch in complex with thiamine pyrophosphate and the U1A crystallization moduleX-RAY DIFFRACTION3.187
72HOP|ACrystal structure of an E. coli thi-box riboswitch bound to pyrithiamineX-RAY DIFFRACTION3.383