Equivalence class NR_all_54627.5 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4A3G|1|P (rep) | TRANSCRIPT RNA 5'-R(*CP*AP)-3' | Saccharomyces cerevisiae | RNA Polymerase II initial transcribing complex with a 2nt DNA-RNA hybrid | X-ray diffraction | 3.5 | 2012-02-08 | |||
| 2 | 4A3J|1|P | 5'-R(*CP*AP)-3' | synthetic construct | RNA Polymerase II initial transcribing complex with a 2nt DNA-RNA hybrid and soaked with GMPCPP | X-ray diffraction | 3.7 | 2011-12-07 | |||
| 3 | 7K00|1|5 | E-site tRNA | Escherichia coli | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | Electron microscopy | 1.98 | 2020-09-23 | |||
| 4 | 5MMI|1|z | E-site tRNA | Spinacia oleracea | Structure of the large subunit of the chloroplast ribosome | Electron microscopy | 3.2 | 2017-01-11 | |||
| 5 | 3J9M|1|u | E-site tRNA | Homo sapiens | Structure of the human mitochondrial ribosome (class 1) | Electron microscopy | 3.5 | 2015-04-15 | |||
| 6 | 7A5K|1|u3 | RNA | Homo sapiens | Structure of the human mitoribosome in the post translocation state bound to mtEF-G1 | Electron microscopy | 3.7 | 2020-12-23 | |||
| 7 | 6NU2|1|u | E-site tRNA | Homo sapiens | Structural insights into unique features of the human mitochondrial ribosome recycling | Electron microscopy | 3.9 | 2019-04-17 | |||
| 8 | 7A5G|1|u3 | RNA (5'-R(P*CP*A)-3') | Homo sapiens | Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA | Electron microscopy | 4.33 | 2020-12-23 | |||
| 9 | 6NU3|1|u | E-site tRNA | Homo sapiens | Structural insights into unique features of the human mitochondrial ribosome recycling | Electron microscopy | 4.4 | 2019-04-17 |
Release history
| Release | 3.158 | 3.159 | 3.160 | 3.161 | 3.162 | 3.163 | 3.164 | 3.165 | 3.166 | 3.167 | 3.168 | 3.169 | 3.170 | 3.171 | 3.172 | 3.173 | 3.174 | 3.175 | 3.176 | 3.177 | 3.178 | 3.179 | 3.180 | 3.181 | 3.182 | 3.183 | 3.184 | 3.185 | 3.186 | 3.187 | 3.188 | 3.189 | 3.190 | 3.191 | 3.192 | 3.193 | 3.194 | 3.195 | 3.196 | 3.197 | 3.198 | 3.199 | 3.200 | 3.201 | 3.202 | 3.203 | 3.204 | 3.205 | 3.206 | 3.207 | 3.208 | 3.209 | 3.210 | 3.211 | 3.212 | 3.213 | 3.214 | 3.215 | 3.216 | 3.217 | 3.218 | 3.219 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2020-12-23 | 2020-12-30 | 2021-01-06 | 2021-01-13 | 2021-01-20 | 2021-01-27 | 2021-02-03 | 2021-02-10 | 2021-02-17 | 2021-02-24 | 2021-03-03 | 2021-03-10 | 2021-03-17 | 2021-03-24 | 2021-03-31 | 2021-04-07 | 2021-04-14 | 2021-04-21 | 2021-04-28 | 2021-05-05 | 2021-05-12 | 2021-05-19 | 2021-05-26 | 2021-06-02 | 2021-06-09 | 2021-06-16 | 2021-06-23 | 2021-06-30 | 2021-07-07 | 2021-07-14 | 2021-07-21 | 2021-07-28 | 2021-08-04 | 2021-08-11 | 2021-08-18 | 2021-08-25 | 2021-09-01 | 2021-09-08 | 2021-09-15 | 2021-09-22 | 2021-09-29 | 2021-10-06 | 2021-10-13 | 2021-10-20 | 2021-10-27 | 2021-11-03 | 2021-11-10 | 2021-11-17 | 2021-11-24 | 2021-12-01 | 2021-12-08 | 2021-12-15 | 2021-12-22 | 2021-12-29 | 2022-01-05 | 2022-01-12 | 2022-01-19 | 2022-01-26 | 2022-02-02 | 2022-02-09 | 2022-02-16 | 2022-02-23 |
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6NU2|1|u | Structural insights into unique features of the human mitochondrial ribosome recycling | ELECTRON MICROSCOPY | 3.9 | 2 |
| 2 | 5MMI|1|z | Structure of the large subunit of the chloroplast ribosome | ELECTRON MICROSCOPY | 3.2 | 2 |
| 3 | 3J9M|1|u | Structure of the human mitochondrial ribosome (class 1) | ELECTRON MICROSCOPY | 3.5 | 2 |
| 4 | 4A3G|1|P | RNA Polymerase II initial transcribing complex with a 2nt DNA-RNA hybrid | X-RAY DIFFRACTION | 3.5 | 2 |
| 5 | 4A3J|1|P | RNA Polymerase II initial transcribing complex with a 2nt DNA-RNA hybrid and soaked with GMPCPP | X-RAY DIFFRACTION | 3.7 | 2 |
| 6 | 6NU3|1|u | Structural insights into unique features of the human mitochondrial ribosome recycling | ELECTRON MICROSCOPY | 4.4 | 2 |
| 7 | 7A5G|1|u3 | Structure of the elongating human mitoribosome bound to mtEF-Tu.GMPPCP and A/T mt-tRNA | ELECTRON MICROSCOPY | 4.33 | 2 |
| 8 | 7A5K|1|u3 | Structure of the human mitoribosome in the post translocation state bound to mtEF-G1 | ELECTRON MICROSCOPY | 3.7 | 2 |
| 9 | 7K00|1|5 | Structure of the Bacterial Ribosome at 2 Angstrom Resolution | ELECTRON MICROSCOPY | 1.98 | 2 |