Equivalence class NR_all_57834.3 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7QTT|1|d+ 7QTT|1|f (rep) | U6 spliceosomal RNA + U2 splicesomal small nuclear RNA | U6snRNA, U2snRNA, MINX | Homo sapiens | Eukarya | RF00026 + RF00004 | Structural organization of a late activated human spliceosome (Baqr, core region) | Electron microscopy | 3.1 | 2023-05-10 |
| 2 | 6FF4|1|6 | U6 spliceosomal RNA | U6 snRNA, U2 snRNA, pre mRNA | Homo sapiens | Eukarya | RF00026 | human Bact spliceosome core structure | Electron microscopy | 3.4 | 2018-08-29 |
| 3 | 6ID0|1|F+ 6ID0|1|H | U6 spliceosomal RNA + U2 splicesomal small nuclear RNA | U6snRNA, U2snRNA, pre-mRNA | Homo sapiens | Eukarya | RF00026 + RF00004 | Cryo-EM structure of a human intron lariat spliceosome prior to Prp43 loaded (ILS1 complex) at 2.9 angstrom resolution | Electron microscopy | 2.9 | 2019-03-13 |
| 4 | 7ABF|1|6 | U6 spliceosomal RNA | U6 small nuclear RNA, MINX M3 RNA | Homo sapiens | Eukarya | RF00026 | Human pre-Bact-1 spliceosome core structure | Electron microscopy | 3.9 | 2020-12-09 |
| 5 | 7AAV|1|6 | U6 spliceosomal RNA | U6 snRNA, U2 snRNA, MINX M3 pre-mRNA | Homo sapiens | Eukarya | RF00026 | Human pre-Bact-2 spliceosome core structure | Electron microscopy | 4.2 | 2020-12-09 |
| 6 | 6FF7|1|6 | U6 spliceosomal RNA | U6 snRNA, U2 snRNA, pre-mRNA | Homo sapiens | Eukarya | RF00026 | human Bact spliceosome core structure | Electron microscopy | 4.5 | 2019-03-13 |
| 7 | 3JCR|1|N | U6 spliceosomal RNA | U6 snRNA | Homo sapiens | Eukarya | RF00026 | 3D structure determination of the human*U4/U6.U5* tri-snRNP complex | Electron microscopy | 7 | 2016-03-09 |
Release history
| Release | 3.282 | 3.283 | 3.284 | 3.285 | 3.286 | 3.287 | 3.288 | 3.289 | 3.290 | 3.291 | 3.292 | 3.293 | 3.294 | 3.295 | 3.296 | 3.297 | 3.298 | 3.299 | 3.300 | 3.301 | 3.302 | 3.303 | 3.304 | 3.305 | 3.306 | 3.307 | 3.308 | 3.309 | 3.310 | 3.311 | 3.312 | 3.313 | 3.314 | 3.315 | 3.316 | 3.317 | 3.318 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-05-10 | 2023-05-17 | 2023-05-24 | 2023-05-31 | 2023-06-07 | 2023-06-14 | 2023-06-21 | 2023-06-28 | 2023-07-05 | 2023-07-12 | 2023-07-19 | 2023-07-26 | 2023-08-02 | 2023-08-09 | 2023-08-16 | 2023-08-23 | 2023-08-30 | 2023-09-06 | 2023-09-13 | 2023-09-20 | 2023-09-27 | 2023-10-04 | 2023-10-11 | 2023-10-18 | 2023-10-25 | 2023-11-01 | 2023-11-08 | 2023-11-15 | 2023-11-24 | 2023-11-29 | 2023-12-06 | 2023-12-13 | 2023-12-20 | 2023-12-27 | 2024-01-03 | 2024-01-10 | 2024-01-17 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_57834.3 | NR_all_57834.2 | 3.282 | (6) 7ABF|1|6, 7AAV|1|6, 6ID0|1|F+6ID0|1|H, 6FF7|1|6, 6FF4|1|6, 3JCR|1|N | (1) 7QTT|1|d+7QTT|1|f | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6FF7|1|6 | human Bact spliceosome core structure | ELECTRON MICROSCOPY | 4.5 | 95 |
| 2 | 6FF4|1|6 | human Bact spliceosome core structure | ELECTRON MICROSCOPY | 3.4 | 95 |
| 3 | 7QTT|1|d+7QTT|1|f | Structural organization of a late activated human spliceosome (Baqr, core region) | ELECTRON MICROSCOPY | 3.1 | 93 |
| 4 | 6ID0|1|F+6ID0|1|H | Cryo-EM structure of a human intron lariat spliceosome prior to Prp43 loaded (ILS1 complex) at 2.9 angstrom resolution | ELECTRON MICROSCOPY | 2.9 | 97 |
| 5 | 7ABF|1|6 | Human pre-Bact-1 spliceosome core structure | ELECTRON MICROSCOPY | 3.9 | 65 |
| 6 | 7AAV|1|6 | Human pre-Bact-2 spliceosome core structure | ELECTRON MICROSCOPY | 4.2 | 73 |
| 7 | 3JCR|1|N | 3D structure determination of the human*U4/U6.U5* tri-snRNP complex | ELECTRON MICROSCOPY | 7 | 37 |