Equivalence class NR_all_58139.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5O9Z|1|4+ 5O9Z|1|2+ 5O9Z|1|6 (rep) | U4 spliceosomal RNA + U2 splicesomal small nuclear RNA + U6 spliceosomal RNA | Homo sapiens U4A snRNA, Human gene for small nuclear RNA U2 (snRNA U2), Homo sapiens RNA, U6 small nuclear 1 (RNU6-1), small nuclear RNA, MINX pre-mRNA | Homo sapiens | Eukarya | RF00015 + RF00004 + RF00026 | Cryo-EM structure of a pre-catalytic human spliceosome primed for activation (B complex) | Electron microscopy | 4.5 | 2017-08-16 |
| 2 | 3JCR|1|M | U4 spliceosomal RNA | U4 snRNA | Homo sapiens | Eukarya | RF00015 | 3D structure determination of the human*U4/U6.U5* tri-snRNP complex | Electron microscopy | 7 | 2016-03-09 |
Release history
| Release | 2.142 | 2.143 | 2.144 | 2.145 | 2.146 | 2.147 | 2.148 | 2.149 | 2.150 | 2.151 | 2.152 | 2.153 | 2.154 | 2.155 | 2.156 | 2.157 | 2.158 | 3.0 | 3.1 | 3.2 | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2017-08-19 | 2017-08-26 | 2017-09-03 | 2017-09-09 | 2017-09-16 | 2017-09-23 | 2017-09-30 | 2017-10-07 | 2017-10-14 | 2017-10-21 | 2017-10-28 | 2017-11-03 | 2017-11-10 | 2017-11-17 | 2017-11-24 | 2017-12-01 | 2017-12-08 | 2017-12-15 | 2017-12-22 | 2017-12-29 | 2018-01-05 | 2018-01-12 | 2018-01-19 | 2018-01-26 | 2018-02-02 | 2018-02-09 | 2018-02-16 | 2018-02-23 | 2018-03-01 | 2018-03-08 | 2018-03-15 | 2018-03-22 | 2018-03-29 | 2018-04-06 | 2018-04-13 | 2018-04-20 | 2018-04-27 | 2018-05-04 | 2018-05-11 | 2018-05-18 | 2018-05-25 | 2018-06-01 | 2018-06-08 | 2018-06-15 | 2018-06-22 | 2018-06-29 | 2018-07-06 | 2018-07-13 | 2018-07-20 | 2018-07-27 | 2018-08-03 | 2018-08-10 | 2018-08-17 | 2018-08-24 | 2018-08-31 | 2018-09-07 | 2018-09-14 | 2018-09-21 | 2018-09-28 | 2018-10-05 | 2018-10-12 | 2018-10-19 | 2018-10-26 | 2018-11-02 | 2018-11-09 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_58139.1 | NR_all_41780.1 | 2.142 | (1) 3JCR|1|M | (1) 5O9Z|1|4+5O9Z|1|2+5O9Z|1|6 | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|---|---|---|---|---|
| NR_all_58139.1 | NR_all_67328.1 | 3.48 | (2) 5O9Z|1|4+5O9Z|1|2+5O9Z|1|6, 3JCR|1|M | (0) | (2) 6AHD|1|I+6AHD|1|H+6AHD|1|F, 6AH0|1|I+6AH0|1|H+6AH0|1|F |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5O9Z|1|4+5O9Z|1|2+5O9Z|1|6 | Cryo-EM structure of a pre-catalytic human spliceosome primed for activation (B complex) | ELECTRON MICROSCOPY | 4.5 | 137 |
| 2 | 3JCR|1|M | 3D structure determination of the human*U4/U6.U5* tri-snRNP complex | ELECTRON MICROSCOPY | 7 | 103 |